EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000003139 (Gene tree)
Gene ID: -
Gene Symbol: HNRNPA1
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 4543 bases
Position: chrJH602217.1:2314249-2318791
Accession: 101711324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000004293	RRM_1	PF00076.22	1.9e-36	1	2
ENSHGLP00000004293	RRM_1	PF00076.22	1.9e-36	2	2
ENSHGLP00000004292	RRM_1	PF00076.22	3e-36	1	2
ENSHGLP00000004292	RRM_1	PF00076.22	3e-36	2	2
ENSHGLP00000004292	HnRNPA1	PF11627.8	9.8e-19	1	1
ENSHGLP00000004293	HnRNPA1	PF11627.8	2.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000004353	-	1759	XM_004872791	ENSHGLP00000004293	320 (aa)	XP_004872848	UPI0003502986
ENSHGLT00000004352	-	1919	XM_004872790	ENSHGLP00000004292	373 (aa)	XP_004872847	A0A0P6JBQ6

Gene Model

Click here to download ENSHGLG00000003139's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000003139's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000003139	HNRNPA1	75	39.004	ENSHGLG00000012782	MSI1	50	42.308
ENSHGLG00000003139	HNRNPA1	61	84.343	ENSHGLG00000007599	-	52	85.326
ENSHGLG00000003139	HNRNPA1	96	82.545	ENSHGLG00000018325	-	100	80.727
ENSHGLG00000003139	HNRNPA1	74	42.105	ENSHGLG00000010919	-	63	39.080
ENSHGLG00000003139	HNRNPA1	57	59.551	ENSHGLG00000018216	HNRNPA0	98	49.329
ENSHGLG00000003139	HNRNPA1	61	70.408	ENSHGLG00000008275	-	90	57.716
ENSHGLG00000003139	HNRNPA1	54	37.059	ENSHGLG00000013420	-	59	37.059
ENSHGLG00000003139	HNRNPA1	57	86.339	ENSHGLG00000012306	-	71	86.339
ENSHGLG00000003139	HNRNPA1	86	71.014	ENSHGLG00000015396	HNRNPA2B1	93	67.586
ENSHGLG00000003139	HNRNPA1	59	30.323	ENSHGLG00000008434	PABPC1L	57	30.323
ENSHGLG00000003139	HNRNPA1	100	86.875	ENSHGLG00000015610	-	90	86.875
ENSHGLG00000003139	HNRNPA1	61	85.714	ENSHGLG00000005451	HNRNPA3	94	80.000
ENSHGLG00000003139	HNRNPA1	54	40.000	ENSHGLG00000014490	HNRNPAB	61	39.548
ENSHGLG00000003139	HNRNPA1	50	43.023	ENSHGLG00000005839	CIRBP	51	43.023
ENSHGLG00000003139	HNRNPA1	67	40.476	ENSHGLG00000004214	HNRNPD	55	44.444
ENSHGLG00000003139	HNRNPA1	53	36.429	ENSHGLG00000018967	TARDBP	52	33.333
ENSHGLG00000003139	HNRNPA1	51	36.364	ENSHGLG00000011055	RBMX	81	36.364
ENSHGLG00000003139	HNRNPA1	61	75.000	ENSHGLG00000014577	-	67	77.049
ENSHGLG00000003139	HNRNPA1	52	74.490	ENSHGLG00000004439	-	79	63.487
ENSHGLG00000003139	HNRNPA1	50	80.214	ENSHGLG00000014107	-	95	77.143
ENSHGLG00000003139	HNRNPA1	95	92.739	ENSHGLG00000020870	-	87	92.715
ENSHGLG00000003139	HNRNPA1	99	94.637	ENSHGLG00000019948	-	100	94.637
ENSHGLG00000003139	HNRNPA1	61	80.102	ENSHGLG00000003841	-	80	67.219
ENSHGLG00000003139	HNRNPA1	61	37.629	ENSHGLG00000014427	-	74	38.235
ENSHGLG00000003139	HNRNPA1	61	80.102	ENSHGLG00000018499	-	94	63.548
ENSHGLG00000003139	HNRNPA1	61	82.653	ENSHGLG00000014445	-	63	80.000
ENSHGLG00000003139	HNRNPA1	56	50.000	ENSHGLG00000012444	MSI2	58	50.000
ENSHGLG00000003139	HNRNPA1	99	85.357	ENSHGLG00000015932	-	100	86.071
ENSHGLG00000003139	HNRNPA1	59	59.788	ENSHGLG00000010704	-	92	50.633

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000003139	HNRNPA1	87	71.786	ENSAMEG00000002186	-	100	70.139	Ailuropoda_melanoleuca
ENSHGLG00000003139	HNRNPA1	92	85.484	ENSANAG00000031918	-	100	85.484	Aotus_nancymaae
ENSHGLG00000003139	HNRNPA1	100	85.714	ENSCAFG00000006327	-	100	88.509	Canis_familiaris
ENSHGLG00000003139	HNRNPA1	94	86.667	ENSCAFG00000017180	-	94	86.667	Canis_familiaris
ENSHGLG00000003139	HNRNPA1	87	87.770	ENSCHIG00000020351	-	92	88.316	Capra_hircus
ENSHGLG00000003139	HNRNPA1	94	71.854	ENSDNOG00000048335	-	94	72.517	Dasypus_novemcinctus
ENSHGLG00000003139	HNRNPA1	94	61.130	ENSDNOG00000039534	-	93	61.000	Dasypus_novemcinctus
ENSHGLG00000003139	HNRNPA1	100	77.358	ENSDNOG00000030945	-	100	59.248	Dasypus_novemcinctus
ENSHGLG00000003139	HNRNPA1	100	99.062	ENSDORG00000027821	-	100	99.062	Dipodomys_ordii
ENSHGLG00000003139	HNRNPA1	67	64.651	ENSETEG00000004129	-	69	66.667	Echinops_telfairi
ENSHGLG00000003139	HNRNPA1	88	72.500	ENSETEG00000010244	-	86	72.500	Echinops_telfairi
ENSHGLG00000003139	HNRNPA1	100	100.000	ENSFDAG00000021342	-	100	100.000	Fukomys_damarensis
ENSHGLG00000003139	HNRNPA1	100	100.000	ENSHGLG00100015974	HNRNPA1	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000003139	HNRNPA1	68	100.000	ENSHGLG00100017719	-	94	77.627	Heterocephalus_glaber_male
ENSHGLG00000003139	HNRNPA1	80	77.043	ENSSTOG00000034519	-	80	77.043	Ictidomys_tridecemlineatus
ENSHGLG00000003139	HNRNPA1	100	67.560	ENSMNEG00000038539	-	97	60.282	Macaca_nemestrina
ENSHGLG00000003139	HNRNPA1	78	74.597	ENSMPUG00000008269	-	69	79.121	Mustela_putorius_furo
ENSHGLG00000003139	HNRNPA1	99	70.461	ENSMPUG00000003127	-	64	82.407	Mustela_putorius_furo
ENSHGLG00000003139	HNRNPA1	90	69.461	ENSNLEG00000032512	-	95	70.115	Nomascus_leucogenys
ENSHGLG00000003139	HNRNPA1	61	97.938	ENSOCUG00000028124	-	52	98.942	Oryctolagus_cuniculus
ENSHGLG00000003139	HNRNPA1	88	71.731	ENSPTIG00000013949	-	92	71.731	Panthera_tigris_altaica
ENSHGLG00000003139	HNRNPA1	60	93.960	ENSPANG00000017095	-	100	86.545	Papio_anubis
ENSHGLG00000003139	HNRNPA1	53	89.899	ENSSFOG00015007588	-	91	71.037	Scleropages_formosus
ENSHGLG00000003139	HNRNPA1	89	90.210	ENSTBEG00000012511	-	100	90.210	Tupaia_belangeri
ENSHGLG00000003139	HNRNPA1	95	60.518	ENSTBEG00000007607	-	72	70.732	Tupaia_belangeri