EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000003202 (Gene tree)
Gene ID: -
Gene Symbol: POLR1D
Alias: MGC9850|RPA16|RPA9|RPAC2|RPO1-3
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 64263 bases
Position: chrJH602089.1:10810952-10875214
Accession: 101715737
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000004386	RNA_pol_L_2	PF13656.6	2.9e-28	1	1
ENSHGLP00000004386	RNA_pol_L	PF01193.24	4.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000004447	POLR1D-202	1184	XM_004854810	ENSHGLP00000004386	133 (aa)	XP_004854867	UPI00034FAFED
ENSHGLT00000004446	POLR1D-201	1252	-	ENSHGLP00000004385	122 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000003202's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000003202's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000003202	POLR1D	80	33.019	ENSHGLG00000013598	POLR2J	88	33.019

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000003202	POLR1D	100	95.489	ENSG00000186184	POLR1D	100	95.489	Homo_sapiens
ENSHGLG00000003202	POLR1D	76	67.327	ENSAPOG00000021882	polr1d	94	68.000	Acanthochromis_polyacanthus
ENSHGLG00000003202	POLR1D	94	95.200	ENSAMEG00000019095	POLR1D	100	95.200	Ailuropoda_melanoleuca
ENSHGLG00000003202	POLR1D	75	75.000	ENSACIG00000013328	polr1d	87	75.000	Amphilophus_citrinellus
ENSHGLG00000003202	POLR1D	84	65.179	ENSAOCG00000018500	polr1d	98	65.179	Amphiprion_ocellaris
ENSHGLG00000003202	POLR1D	84	64.286	ENSAPEG00000009489	polr1d	98	64.286	Amphiprion_percula
ENSHGLG00000003202	POLR1D	80	65.421	ENSATEG00000019322	polr1d	94	65.421	Anabas_testudineus
ENSHGLG00000003202	POLR1D	83	63.964	ENSACAG00000015753	POLR1D	96	63.964	Anolis_carolinensis
ENSHGLG00000003202	POLR1D	100	95.489	ENSANAG00000024486	POLR1D	100	95.489	Aotus_nancymaae
ENSHGLG00000003202	POLR1D	77	72.549	ENSACLG00000023805	polr1d	94	69.159	Astatotilapia_calliptera
ENSHGLG00000003202	POLR1D	79	66.667	ENSAMXG00000036118	polr1d	91	66.667	Astyanax_mexicanus
ENSHGLG00000003202	POLR1D	100	92.481	ENSBTAG00000033252	-	100	92.481	Bos_taurus
ENSHGLG00000003202	POLR1D	100	92.481	ENSBTAG00000008642	POLR1D	100	92.481	Bos_taurus
ENSHGLG00000003202	POLR1D	62	36.585	WBGene00010230	rpac-19	57	36.585	Caenorhabditis_elegans
ENSHGLG00000003202	POLR1D	100	96.241	ENSCJAG00000044669	POLR1D	100	96.241	Callithrix_jacchus
ENSHGLG00000003202	POLR1D	100	95.489	ENSCAFG00000006755	POLR1D	100	95.489	Canis_familiaris
ENSHGLG00000003202	POLR1D	100	93.233	ENSCHIG00000021910	POLR1D	100	93.233	Capra_hircus
ENSHGLG00000003202	POLR1D	93	91.129	ENSTSYG00000026817	-	93	91.129	Carlito_syrichta
ENSHGLG00000003202	POLR1D	96	80.000	ENSTSYG00000034852	-	98	79.832	Carlito_syrichta
ENSHGLG00000003202	POLR1D	96	56.250	ENSCAPG00000006058	-	99	56.250	Cavia_aperea
ENSHGLG00000003202	POLR1D	96	57.031	ENSCPOG00000030450	-	99	57.031	Cavia_porcellus
ENSHGLG00000003202	POLR1D	100	75.940	ENSCCAG00000020191	-	100	75.940	Cebus_capucinus
ENSHGLG00000003202	POLR1D	100	93.985	ENSCCAG00000021349	-	100	93.985	Cebus_capucinus
ENSHGLG00000003202	POLR1D	100	83.459	ENSCATG00000022900	-	100	83.459	Cercocebus_atys
ENSHGLG00000003202	POLR1D	100	93.985	ENSCATG00000030710	-	100	93.985	Cercocebus_atys
ENSHGLG00000003202	POLR1D	93	96.774	ENSCLAG00000017623	POLR1D	100	96.774	Chinchilla_lanigera
ENSHGLG00000003202	POLR1D	73	77.320	ENSCPBG00000004719	POLR1D	96	77.320	Chrysemys_picta_bellii
ENSHGLG00000003202	POLR1D	100	90.977	ENSCANG00000037694	-	100	90.977	Colobus_angolensis_palliatus
ENSHGLG00000003202	POLR1D	100	93.985	ENSCANG00000028632	-	100	93.985	Colobus_angolensis_palliatus
ENSHGLG00000003202	POLR1D	100	92.481	ENSCGRG00001021251	Polr1d	100	92.481	Cricetulus_griseus_chok1gshd
ENSHGLG00000003202	POLR1D	100	92.481	ENSCGRG00000011639	Polr1d	100	92.481	Cricetulus_griseus_crigri
ENSHGLG00000003202	POLR1D	74	71.429	ENSCSEG00000018268	polr1d	91	67.290	Cynoglossus_semilaevis
ENSHGLG00000003202	POLR1D	79	69.524	ENSCVAG00000018527	polr1d	92	69.524	Cyprinodon_variegatus
ENSHGLG00000003202	POLR1D	83	64.545	ENSDARG00000037570	polr1d	98	64.545	Danio_rerio
ENSHGLG00000003202	POLR1D	100	90.299	ENSDNOG00000046247	-	100	90.299	Dasypus_novemcinctus
ENSHGLG00000003202	POLR1D	100	92.481	ENSDNOG00000043676	-	100	92.481	Dasypus_novemcinctus
ENSHGLG00000003202	POLR1D	100	93.233	ENSDORG00000029155	Polr1d	100	93.233	Dipodomys_ordii
ENSHGLG00000003202	POLR1D	65	45.349	FBgn0086447	l(2)37Cg	81	45.349	Drosophila_melanogaster
ENSHGLG00000003202	POLR1D	93	91.129	ENSETEG00000012797	POLR1D	100	91.129	Echinops_telfairi
ENSHGLG00000003202	POLR1D	65	72.414	ENSEBUG00000011748	polr1d	61	72.414	Eptatretus_burgeri
ENSHGLG00000003202	POLR1D	96	93.750	ENSEASG00005022487	POLR1D	99	93.750	Equus_asinus_asinus
ENSHGLG00000003202	POLR1D	93	93.548	ENSEEUG00000013144	POLR1D	100	93.548	Erinaceus_europaeus
ENSHGLG00000003202	POLR1D	80	67.925	ENSELUG00000005105	rpac2	93	67.925	Esox_lucius
ENSHGLG00000003202	POLR1D	100	94.737	ENSFCAG00000030162	POLR1D	100	94.737	Felis_catus
ENSHGLG00000003202	POLR1D	72	75.000	ENSFALG00000011463	POLR1D	95	75.000	Ficedula_albicollis
ENSHGLG00000003202	POLR1D	100	98.496	ENSFDAG00000004463	POLR1D	100	98.496	Fukomys_damarensis
ENSHGLG00000003202	POLR1D	80	72.222	ENSFHEG00000015410	polr1d	94	72.222	Fundulus_heteroclitus
ENSHGLG00000003202	POLR1D	79	70.476	ENSGAFG00000001693	polr1d	92	70.476	Gambusia_affinis
ENSHGLG00000003202	POLR1D	88	66.949	ENSGACG00000018585	polr1d	100	66.949	Gasterosteus_aculeatus
ENSHGLG00000003202	POLR1D	80	76.415	ENSGAGG00000008503	POLR1D	93	76.415	Gopherus_agassizii
ENSHGLG00000003202	POLR1D	100	95.489	ENSGGOG00000004235	POLR1D	100	95.489	Gorilla_gorilla
ENSHGLG00000003202	POLR1D	80	69.159	ENSHBUG00000002111	polr1d	94	69.159	Haplochromis_burtoni
ENSHGLG00000003202	POLR1D	100	100.000	ENSHGLG00100009393	POLR1D	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000003202	POLR1D	80	66.355	ENSHCOG00000003258	polr1d	94	66.355	Hippocampus_comes
ENSHGLG00000003202	POLR1D	82	70.642	ENSIPUG00000014810	polr1d	95	70.642	Ictalurus_punctatus
ENSHGLG00000003202	POLR1D	100	96.241	ENSSTOG00000013877	POLR1D	100	96.241	Ictidomys_tridecemlineatus
ENSHGLG00000003202	POLR1D	95	72.222	ENSJJAG00000021667	-	75	72.222	Jaculus_jaculus
ENSHGLG00000003202	POLR1D	97	87.218	ENSJJAG00000022671	-	100	90.000	Jaculus_jaculus
ENSHGLG00000003202	POLR1D	80	65.094	ENSKMAG00000015256	polr1d	93	65.094	Kryptolebias_marmoratus
ENSHGLG00000003202	POLR1D	79	68.571	ENSLBEG00000015919	polr1d	92	68.571	Labrus_bergylta
ENSHGLG00000003202	POLR1D	87	63.793	ENSLACG00000006810	POLR1D	96	63.793	Latimeria_chalumnae
ENSHGLG00000003202	POLR1D	54	78.378	ENSLOCG00000014976	polr1d	100	78.378	Lepisosteus_oculatus
ENSHGLG00000003202	POLR1D	100	86.466	ENSLAFG00000032290	POLR1D	100	86.466	Loxodonta_africana
ENSHGLG00000003202	POLR1D	94	93.600	ENSMFAG00000045264	POLR1D	97	93.600	Macaca_fascicularis
ENSHGLG00000003202	POLR1D	87	93.966	ENSMMUG00000020386	POLR1D	100	93.966	Macaca_mulatta
ENSHGLG00000003202	POLR1D	100	75.188	ENSMMUG00000041570	-	100	75.188	Macaca_mulatta
ENSHGLG00000003202	POLR1D	100	94.737	ENSMNEG00000008630	-	100	94.737	Macaca_nemestrina
ENSHGLG00000003202	POLR1D	100	78.195	ENSMNEG00000038120	-	100	78.195	Macaca_nemestrina
ENSHGLG00000003202	POLR1D	100	84.211	ENSMLEG00000032251	-	100	84.211	Mandrillus_leucophaeus
ENSHGLG00000003202	POLR1D	100	94.737	ENSMLEG00000041048	-	100	94.737	Mandrillus_leucophaeus
ENSHGLG00000003202	POLR1D	76	69.307	ENSMAMG00000014834	polr1d	94	69.307	Mastacembelus_armatus
ENSHGLG00000003202	POLR1D	77	72.549	ENSMZEG00005006638	polr1d	90	72.549	Maylandia_zebra
ENSHGLG00000003202	POLR1D	69	76.087	ENSMGAG00000005322	POLR1D	84	76.087	Meleagris_gallopavo
ENSHGLG00000003202	POLR1D	100	92.481	ENSMAUG00000001946	Polr1d	100	92.481	Mesocricetus_auratus
ENSHGLG00000003202	POLR1D	99	78.788	ENSMICG00000007349	-	100	78.788	Microcebus_murinus
ENSHGLG00000003202	POLR1D	100	96.241	ENSMICG00000016883	-	100	96.241	Microcebus_murinus
ENSHGLG00000003202	POLR1D	99	93.182	ENSMOCG00000021288	Polr1d	99	93.182	Microtus_ochrogaster
ENSHGLG00000003202	POLR1D	80	66.355	ENSMMOG00000009605	polr1d	94	66.355	Mola_mola
ENSHGLG00000003202	POLR1D	80	81.132	ENSMODG00000023881	POLR1D	93	81.132	Monodelphis_domestica
ENSHGLG00000003202	POLR1D	77	66.990	ENSMALG00000010652	polr1d	90	66.990	Monopterus_albus
ENSHGLG00000003202	POLR1D	100	89.474	MGP_CAROLIEiJ_G0028034	Polr1d	100	89.474	Mus_caroli
ENSHGLG00000003202	POLR1D	100	89.474	ENSMUSG00000029642	Polr1d	100	89.474	Mus_musculus
ENSHGLG00000003202	POLR1D	100	88.722	MGP_PahariEiJ_G0024600	Polr1d	100	88.722	Mus_pahari
ENSHGLG00000003202	POLR1D	100	90.226	MGP_SPRETEiJ_G0029032	Polr1d	100	90.226	Mus_spretus
ENSHGLG00000003202	POLR1D	99	84.848	ENSMLUG00000004118	-	99	84.848	Myotis_lucifugus
ENSHGLG00000003202	POLR1D	100	93.233	ENSMLUG00000027169	-	100	93.233	Myotis_lucifugus
ENSHGLG00000003202	POLR1D	87	93.103	ENSNGAG00000006014	Polr1d	100	93.103	Nannospalax_galili
ENSHGLG00000003202	POLR1D	80	69.159	ENSNBRG00000020327	polr1d	94	69.159	Neolamprologus_brichardi
ENSHGLG00000003202	POLR1D	100	95.489	ENSNLEG00000000358	POLR1D	100	95.489	Nomascus_leucogenys
ENSHGLG00000003202	POLR1D	100	81.203	ENSODEG00000014801	-	100	81.203	Octodon_degus
ENSHGLG00000003202	POLR1D	100	95.489	ENSODEG00000005294	-	100	95.489	Octodon_degus
ENSHGLG00000003202	POLR1D	79	79.048	ENSOANG00000008708	-	97	79.048	Ornithorhynchus_anatinus
ENSHGLG00000003202	POLR1D	100	94.737	ENSOCUG00000015706	POLR1D	82	94.737	Oryctolagus_cuniculus
ENSHGLG00000003202	POLR1D	80	68.868	ENSORLG00000010257	polr1d	93	68.868	Oryzias_latipes
ENSHGLG00000003202	POLR1D	83	66.667	ENSORLG00020000533	polr1d	75	66.667	Oryzias_latipes_hni
ENSHGLG00000003202	POLR1D	85	67.257	ENSORLG00015013267	polr1d	75	67.257	Oryzias_latipes_hsok
ENSHGLG00000003202	POLR1D	91	63.636	ENSOMEG00000014912	polr1d	81	63.636	Oryzias_melastigma
ENSHGLG00000003202	POLR1D	100	95.489	ENSOGAG00000014601	POLR1D	100	95.489	Otolemur_garnettii
ENSHGLG00000003202	POLR1D	94	92.800	ENSOARG00000017005	POLR1D	96	92.800	Ovis_aries
ENSHGLG00000003202	POLR1D	100	93.985	ENSPPAG00000028138	POLR1D	100	93.985	Pan_paniscus
ENSHGLG00000003202	POLR1D	99	94.697	ENSPPRG00000003381	POLR1D	99	94.697	Panthera_pardus
ENSHGLG00000003202	POLR1D	93	94.355	ENSPTIG00000018137	POLR1D	93	94.355	Panthera_tigris_altaica
ENSHGLG00000003202	POLR1D	100	95.489	ENSPTRG00000005734	POLR1D	100	95.489	Pan_troglodytes
ENSHGLG00000003202	POLR1D	100	94.737	ENSPANG00000020259	-	100	94.737	Papio_anubis
ENSHGLG00000003202	POLR1D	100	83.459	ENSPANG00000035051	-	100	83.459	Papio_anubis
ENSHGLG00000003202	POLR1D	86	60.000	ENSPKIG00000021891	polr1d	90	51.327	Paramormyrops_kingsleyae
ENSHGLG00000003202	POLR1D	87	70.940	ENSPSIG00000011822	POLR1D	91	70.940	Pelodiscus_sinensis
ENSHGLG00000003202	POLR1D	84	65.179	ENSPMGG00000010359	polr1d	97	65.179	Periophthalmus_magnuspinnatus
ENSHGLG00000003202	POLR1D	93	56.000	ENSPMGG00000012998	POLR1D	93	56.000	Periophthalmus_magnuspinnatus
ENSHGLG00000003202	POLR1D	100	88.722	ENSPEMG00000006336	-	100	88.722	Peromyscus_maniculatus_bairdii
ENSHGLG00000003202	POLR1D	82	60.550	ENSPMAG00000004228	polr1d	92	60.550	Petromyzon_marinus
ENSHGLG00000003202	POLR1D	80	81.132	ENSPCIG00000001673	POLR1D	93	81.132	Phascolarctos_cinereus
ENSHGLG00000003202	POLR1D	79	70.476	ENSPFOG00000023343	polr1d	92	71.250	Poecilia_formosa
ENSHGLG00000003202	POLR1D	79	70.476	ENSPLAG00000009675	polr1d	92	70.476	Poecilia_latipinna
ENSHGLG00000003202	POLR1D	79	70.476	ENSPMEG00000004628	polr1d	92	70.476	Poecilia_mexicana
ENSHGLG00000003202	POLR1D	79	70.476	ENSPREG00000022032	polr1d	92	70.476	Poecilia_reticulata
ENSHGLG00000003202	POLR1D	100	94.737	ENSPCOG00000028175	POLR1D	100	94.737	Propithecus_coquereli
ENSHGLG00000003202	POLR1D	80	69.159	ENSPNYG00000000107	polr1d	94	69.159	Pundamilia_nyererei
ENSHGLG00000003202	POLR1D	75	67.000	ENSPNAG00000001512	polr1d	87	66.019	Pygocentrus_nattereri
ENSHGLG00000003202	POLR1D	100	94.737	ENSRBIG00000036378	-	100	94.737	Rhinopithecus_bieti
ENSHGLG00000003202	POLR1D	100	90.977	ENSRBIG00000000336	-	100	90.977	Rhinopithecus_bieti
ENSHGLG00000003202	POLR1D	100	90.977	ENSRROG00000026751	-	100	90.977	Rhinopithecus_roxellana
ENSHGLG00000003202	POLR1D	100	94.737	ENSRROG00000042232	-	100	94.737	Rhinopithecus_roxellana
ENSHGLG00000003202	POLR1D	89	46.218	YNL113W	RPC19	84	46.218	Saccharomyces_cerevisiae
ENSHGLG00000003202	POLR1D	100	95.489	ENSSBOG00000028482	-	100	95.489	Saimiri_boliviensis_boliviensis
ENSHGLG00000003202	POLR1D	86	91.228	ENSSBOG00000030146	-	84	91.228	Saimiri_boliviensis_boliviensis
ENSHGLG00000003202	POLR1D	86	74.561	ENSSHAG00000001190	POLR1D	88	74.561	Sarcophilus_harrisii
ENSHGLG00000003202	POLR1D	82	70.642	ENSSFOG00015011375	polr1d	96	70.642	Scleropages_formosus
ENSHGLG00000003202	POLR1D	80	66.355	ENSSMAG00000011861	polr1d	94	66.355	Scophthalmus_maximus
ENSHGLG00000003202	POLR1D	80	65.421	ENSSDUG00000011930	polr1d	94	65.421	Seriola_dumerili
ENSHGLG00000003202	POLR1D	86	61.739	ENSSLDG00000023871	polr1d	97	61.739	Seriola_lalandi_dorsalis
ENSHGLG00000003202	POLR1D	100	93.985	ENSSARG00000007840	POLR1D	100	93.985	Sorex_araneus
ENSHGLG00000003202	POLR1D	79	73.333	ENSSPUG00000005786	POLR1D	95	70.270	Sphenodon_punctatus
ENSHGLG00000003202	POLR1D	79	70.476	ENSSPAG00000011764	polr1d	92	70.476	Stegastes_partitus
ENSHGLG00000003202	POLR1D	100	93.233	ENSSSCG00000009310	POLR1D	100	93.233	Sus_scrofa
ENSHGLG00000003202	POLR1D	72	75.000	ENSTGUG00000005450	POLR1D	100	75.000	Taeniopygia_guttata
ENSHGLG00000003202	POLR1D	78	65.385	ENSTRUG00000019741	polr1d	91	65.385	Takifugu_rubripes
ENSHGLG00000003202	POLR1D	93	94.355	ENSTBEG00000007006	POLR1D	100	94.355	Tupaia_belangeri
ENSHGLG00000003202	POLR1D	100	95.489	ENSUAMG00000011413	POLR1D	100	95.489	Ursus_americanus
ENSHGLG00000003202	POLR1D	93	95.161	ENSUMAG00000016968	POLR1D	97	95.161	Ursus_maritimus
ENSHGLG00000003202	POLR1D	100	95.489	ENSVVUG00000009216	POLR1D	100	95.489	Vulpes_vulpes
ENSHGLG00000003202	POLR1D	74	73.469	ENSXCOG00000011731	polr1d	75	73.469	Xiphophorus_couchianus
ENSHGLG00000003202	POLR1D	74	73.469	ENSXMAG00000017538	polr1d	75	73.469	Xiphophorus_maculatus