EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000003496 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 1031 bases
Position: chrJH602130.1:1196128-1197158
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000004760	SRP72	PF08492.12	3.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000004823	-	954	-	ENSHGLP00000004760	317 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000003496's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000003496's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000003496	-	97	75.676	ENSHGLG00000005029	-	50	74.775
ENSHGLG00000003496	-	97	67.988	ENSHGLG00000003950	-	53	67.683
ENSHGLG00000003496	-	99	73.199	ENSHGLG00000010633	-	96	60.684
ENSHGLG00000003496	-	97	78.235	ENSHGLG00000009791	SRP72	52	77.746

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000003496	-	97	77.647	ENSG00000174780	SRP72	57	77.168	Homo_sapiens
ENSHGLG00000003496	-	99	60.807	ENSAPOG00000019438	srp72	57	60.983	Acanthochromis_polyacanthus
ENSHGLG00000003496	-	97	77.941	ENSAMEG00000008469	SRP72	51	77.457	Ailuropoda_melanoleuca
ENSHGLG00000003496	-	99	60.000	ENSACIG00000000488	srp72	51	60.058	Amphilophus_citrinellus
ENSHGLG00000003496	-	99	60.519	ENSAOCG00000011256	srp72	52	60.694	Amphiprion_ocellaris
ENSHGLG00000003496	-	99	60.231	ENSAPEG00000001512	srp72	52	60.405	Amphiprion_percula
ENSHGLG00000003496	-	99	62.805	ENSATEG00000006781	srp72	54	63.551	Anabas_testudineus
ENSHGLG00000003496	-	97	68.328	ENSAPLG00000008751	SRP72	51	68.328	Anas_platyrhynchos
ENSHGLG00000003496	-	97	69.208	ENSACAG00000002381	SRP72	51	68.876	Anolis_carolinensis
ENSHGLG00000003496	-	97	76.765	ENSANAG00000020836	-	92	61.111	Aotus_nancymaae
ENSHGLG00000003496	-	99	60.920	ENSACLG00000014617	srp72	52	60.807	Astatotilapia_calliptera
ENSHGLG00000003496	-	97	59.064	ENSAMXG00000004011	srp72	51	58.824	Astyanax_mexicanus
ENSHGLG00000003496	-	97	75.882	ENSBTAG00000010593	SRP72	52	75.434	Bos_taurus
ENSHGLG00000003496	-	97	77.353	ENSCJAG00000017998	SRP72	92	63.675	Callithrix_jacchus
ENSHGLG00000003496	-	97	77.941	ENSCAFG00000002244	SRP72	52	77.457	Canis_familiaris
ENSHGLG00000003496	-	97	77.941	ENSCAFG00020027338	SRP72	58	77.457	Canis_lupus_dingo
ENSHGLG00000003496	-	97	76.176	ENSCHIG00000021465	SRP72	52	75.723	Capra_hircus
ENSHGLG00000003496	-	97	78.235	ENSTSYG00000010571	-	92	64.103	Carlito_syrichta
ENSHGLG00000003496	-	97	67.647	ENSCAPG00000016668	SRP72	92	62.821	Cavia_aperea
ENSHGLG00000003496	-	97	77.647	ENSCPOG00000000218	SRP72	57	77.168	Cavia_porcellus
ENSHGLG00000003496	-	97	76.765	ENSCCAG00000030830	-	51	76.765	Cebus_capucinus
ENSHGLG00000003496	-	92	76.994	ENSCCAG00000030683	-	92	63.675	Cebus_capucinus
ENSHGLG00000003496	-	72	65.234	ENSCCAG00000031330	-	100	65.234	Cebus_capucinus
ENSHGLG00000003496	-	98	62.463	ENSCATG00000045359	-	50	62.611	Cercocebus_atys
ENSHGLG00000003496	-	97	77.353	ENSCATG00000008072	SRP72	57	76.879	Cercocebus_atys
ENSHGLG00000003496	-	97	77.941	ENSCLAG00000003571	SRP72	57	77.457	Chinchilla_lanigera
ENSHGLG00000003496	-	97	67.160	ENSCSAG00000005079	SRP72	51	67.647	Chlorocebus_sabaeus
ENSHGLG00000003496	-	97	77.059	ENSCHOG00000013240	SRP72	52	76.590	Choloepus_hoffmanni
ENSHGLG00000003496	-	97	68.328	ENSCPBG00000015015	SRP72	52	67.723	Chrysemys_picta_bellii
ENSHGLG00000003496	-	94	30.114	ENSCSAVG00000011288	-	53	31.229	Ciona_savignyi
ENSHGLG00000003496	-	97	77.353	ENSCANG00000041709	SRP72	57	76.879	Colobus_angolensis_palliatus
ENSHGLG00000003496	-	97	76.765	ENSCGRG00001013548	Srp72	56	76.765	Cricetulus_griseus_chok1gshd
ENSHGLG00000003496	-	97	76.765	ENSCGRG00000003013	Srp72	59	76.765	Cricetulus_griseus_crigri
ENSHGLG00000003496	-	98	59.078	ENSCSEG00000003616	srp72	53	59.654	Cynoglossus_semilaevis
ENSHGLG00000003496	-	95	60.000	ENSDARG00000014139	srp72	57	59.649	Danio_rerio
ENSHGLG00000003496	-	97	76.471	ENSDORG00000000171	Srp72	51	76.012	Dipodomys_ordii
ENSHGLG00000003496	-	97	76.765	ENSETEG00000005191	SRP72	51	76.301	Echinops_telfairi
ENSHGLG00000003496	-	97	76.765	ENSEASG00005017747	SRP72	52	76.301	Equus_asinus_asinus
ENSHGLG00000003496	-	97	76.765	ENSECAG00000006920	SRP72	52	76.301	Equus_caballus
ENSHGLG00000003496	-	99	57.670	ENSELUG00000022415	srp72	62	57.895	Esox_lucius
ENSHGLG00000003496	-	97	77.353	ENSFCAG00000027600	SRP72	57	76.879	Felis_catus
ENSHGLG00000003496	-	97	69.208	ENSFALG00000006713	SRP72	51	68.915	Ficedula_albicollis
ENSHGLG00000003496	-	63	53.241	ENSFDAG00000012897	-	97	53.241	Fukomys_damarensis
ENSHGLG00000003496	-	97	61.585	ENSFDAG00000009793	-	56	57.622	Fukomys_damarensis
ENSHGLG00000003496	-	97	78.824	ENSFDAG00000002014	-	52	78.324	Fukomys_damarensis
ENSHGLG00000003496	-	95	58.209	ENSGMOG00000005986	srp72	50	58.209	Gadus_morhua
ENSHGLG00000003496	-	97	70.000	ENSGALG00000011403	SRP72	51	70.000	Gallus_gallus
ENSHGLG00000003496	-	99	58.908	ENSGAFG00000017762	srp72	51	58.601	Gambusia_affinis
ENSHGLG00000003496	-	99	58.166	ENSGACG00000016749	srp72	52	60.345	Gasterosteus_aculeatus
ENSHGLG00000003496	-	97	68.915	ENSGAGG00000024611	SRP72	58	68.300	Gopherus_agassizii
ENSHGLG00000003496	-	97	77.941	ENSGGOG00000013234	-	92	64.103	Gorilla_gorilla
ENSHGLG00000003496	-	99	60.632	ENSHBUG00000020723	srp72	52	60.519	Haplochromis_burtoni
ENSHGLG00000003496	-	74	62.642	ENSHGLG00100006071	-	100	63.019	Heterocephalus_glaber_male
ENSHGLG00000003496	-	97	67.988	ENSHGLG00100017133	-	53	67.683	Heterocephalus_glaber_male
ENSHGLG00000003496	-	97	76.074	ENSHGLG00100009346	-	53	73.620	Heterocephalus_glaber_male
ENSHGLG00000003496	-	97	75.676	ENSHGLG00100011236	-	50	74.775	Heterocephalus_glaber_male
ENSHGLG00000003496	-	97	78.235	ENSHGLG00100009021	SRP72	52	77.746	Heterocephalus_glaber_male
ENSHGLG00000003496	-	97	61.111	ENSHCOG00000013760	srp72	51	61.176	Hippocampus_comes
ENSHGLG00000003496	-	99	58.501	ENSIPUG00000000210	srp72	50	59.281	Ictalurus_punctatus
ENSHGLG00000003496	-	97	77.647	ENSSTOG00000007305	SRP72	57	77.168	Ictidomys_tridecemlineatus
ENSHGLG00000003496	-	97	75.294	ENSJJAG00000018324	Srp72	57	74.566	Jaculus_jaculus
ENSHGLG00000003496	-	99	58.453	ENSKMAG00000003776	srp72	52	58.908	Kryptolebias_marmoratus
ENSHGLG00000003496	-	97	61.111	ENSLOCG00000002628	srp72	50	61.176	Lepisosteus_oculatus
ENSHGLG00000003496	-	97	76.176	ENSLAFG00000018307	SRP72	52	75.723	Loxodonta_africana
ENSHGLG00000003496	-	97	77.353	ENSMFAG00000031065	SRP72	57	76.879	Macaca_fascicularis
ENSHGLG00000003496	-	98	63.343	ENSMFAG00000037164	-	50	63.690	Macaca_fascicularis
ENSHGLG00000003496	-	98	77.391	ENSMMUG00000016368	SRP72	57	76.879	Macaca_mulatta
ENSHGLG00000003496	-	98	59.064	ENSMMUG00000021262	-	54	58.580	Macaca_mulatta
ENSHGLG00000003496	-	97	77.353	ENSMNEG00000038065	-	57	76.879	Macaca_nemestrina
ENSHGLG00000003496	-	99	60.920	ENSMZEG00005003325	srp72	52	60.807	Maylandia_zebra
ENSHGLG00000003496	-	97	70.000	ENSMGAG00000008567	SRP72	73	68.824	Meleagris_gallopavo
ENSHGLG00000003496	-	97	77.353	ENSMAUG00000001237	Srp72	56	77.353	Mesocricetus_auratus
ENSHGLG00000003496	-	92	74.540	ENSMICG00000008507	-	92	59.402	Microcebus_murinus
ENSHGLG00000003496	-	97	77.059	ENSMOCG00000020309	Srp72	56	77.059	Microtus_ochrogaster
ENSHGLG00000003496	-	99	58.908	ENSMMOG00000002627	srp72	52	60.231	Mola_mola
ENSHGLG00000003496	-	97	65.689	ENSMODG00000020697	SRP72	51	65.689	Monodelphis_domestica
ENSHGLG00000003496	-	99	59.195	ENSMALG00000003747	srp72	56	59.238	Monopterus_albus
ENSHGLG00000003496	-	97	75.588	MGP_CAROLIEiJ_G0027323	Srp72	56	75.588	Mus_caroli
ENSHGLG00000003496	-	97	75.588	ENSMUSG00000036323	Srp72	56	75.588	Mus_musculus
ENSHGLG00000003496	-	97	76.176	MGP_PahariEiJ_G0017103	Srp72	56	76.176	Mus_pahari
ENSHGLG00000003496	-	97	75.588	MGP_SPRETEiJ_G0028317	Srp72	56	75.588	Mus_spretus
ENSHGLG00000003496	-	97	77.647	ENSMPUG00000004828	SRP72	52	77.168	Mustela_putorius_furo
ENSHGLG00000003496	-	97	76.176	ENSMLUG00000007344	SRP72	51	75.723	Myotis_lucifugus
ENSHGLG00000003496	-	97	76.471	ENSNGAG00000012595	Srp72	57	76.012	Nannospalax_galili
ENSHGLG00000003496	-	99	62.874	ENSNBRG00000014492	srp72	50	62.997	Neolamprologus_brichardi
ENSHGLG00000003496	-	82	76.109	ENSNLEG00000008806	-	92	64.103	Nomascus_leucogenys
ENSHGLG00000003496	-	97	74.706	ENSOPRG00000012521	SRP72	52	74.277	Ochotona_princeps
ENSHGLG00000003496	-	97	78.235	ENSODEG00000012214	SRP72	52	77.746	Octodon_degus
ENSHGLG00000003496	-	99	60.632	ENSONIG00000001446	srp72	52	60.519	Oreochromis_niloticus
ENSHGLG00000003496	-	97	52.326	ENSOANG00000008562	SRP72	50	51.453	Ornithorhynchus_anatinus
ENSHGLG00000003496	-	97	77.353	ENSOCUG00000012226	SRP72	52	76.879	Oryctolagus_cuniculus
ENSHGLG00000003496	-	98	56.522	ENSORLG00000020418	srp72	51	59.172	Oryzias_latipes
ENSHGLG00000003496	-	98	56.232	ENSORLG00020009138	srp72	50	59.226	Oryzias_latipes_hni
ENSHGLG00000003496	-	98	55.942	ENSORLG00015018251	srp72	51	58.580	Oryzias_latipes_hsok
ENSHGLG00000003496	-	98	57.681	ENSOMEG00000022008	srp72	51	58.235	Oryzias_melastigma
ENSHGLG00000003496	-	97	77.647	ENSOGAG00000003578	SRP72	52	77.168	Otolemur_garnettii
ENSHGLG00000003496	-	97	76.176	ENSOARG00000004329	SRP72	52	75.723	Ovis_aries
ENSHGLG00000003496	-	97	77.647	ENSPPAG00000042265	SRP72	92	63.675	Pan_paniscus
ENSHGLG00000003496	-	82	65.292	ENSPPAG00000032490	-	85	50.246	Pan_paniscus
ENSHGLG00000003496	-	97	77.353	ENSPPRG00000015991	SRP72	57	76.879	Panthera_pardus
ENSHGLG00000003496	-	97	77.353	ENSPTIG00000018786	SRP72	57	76.879	Panthera_tigris_altaica
ENSHGLG00000003496	-	82	64.948	ENSPTRG00000043609	-	94	48.804	Pan_troglodytes
ENSHGLG00000003496	-	97	77.647	ENSPTRG00000048466	-	92	63.675	Pan_troglodytes
ENSHGLG00000003496	-	97	77.353	ENSPANG00000005495	SRP72	57	76.879	Papio_anubis
ENSHGLG00000003496	-	98	63.343	ENSPANG00000030230	-	52	64.286	Papio_anubis
ENSHGLG00000003496	-	97	70.381	ENSPSIG00000003003	SRP72	54	69.452	Pelodiscus_sinensis
ENSHGLG00000003496	-	97	76.176	ENSPEMG00000012828	-	55	76.176	Peromyscus_maniculatus_bairdii
ENSHGLG00000003496	-	63	37.991	ENSPMAG00000008885	-	91	37.447	Petromyzon_marinus
ENSHGLG00000003496	-	97	72.647	ENSPCIG00000000732	SRP72	51	72.254	Phascolarctos_cinereus
ENSHGLG00000003496	-	99	59.195	ENSPFOG00000003480	srp72	51	58.892	Poecilia_formosa
ENSHGLG00000003496	-	99	59.195	ENSPLAG00000020122	srp72	51	58.892	Poecilia_latipinna
ENSHGLG00000003496	-	99	58.908	ENSPMEG00000019988	srp72	58	55.917	Poecilia_mexicana
ENSHGLG00000003496	-	99	59.195	ENSPREG00000006218	srp72	56	58.892	Poecilia_reticulata
ENSHGLG00000003496	-	92	68.000	ENSPPYG00000009152	-	84	67.692	Pongo_abelii
ENSHGLG00000003496	-	97	72.941	ENSPVAG00000005590	SRP72	50	73.235	Pteropus_vampyrus
ENSHGLG00000003496	-	99	60.920	ENSPNYG00000001916	srp72	52	60.807	Pundamilia_nyererei
ENSHGLG00000003496	-	99	59.366	ENSPNAG00000022424	srp72	52	58.960	Pygocentrus_nattereri
ENSHGLG00000003496	-	97	73.451	ENSRNOG00000002100	LOC108348180	92	61.966	Rattus_norvegicus
ENSHGLG00000003496	-	97	77.581	ENSRBIG00000042069	SRP72	59	77.101	Rhinopithecus_bieti
ENSHGLG00000003496	-	100	62.286	ENSRBIG00000029328	-	58	62.018	Rhinopithecus_bieti
ENSHGLG00000003496	-	97	77.353	ENSRROG00000035704	SRP72	57	76.879	Rhinopithecus_roxellana
ENSHGLG00000003496	-	77	60.219	ENSRROG00000042114	-	98	61.338	Rhinopithecus_roxellana
ENSHGLG00000003496	-	97	72.353	ENSSHAG00000000614	SRP72	51	71.965	Sarcophilus_harrisii
ENSHGLG00000003496	-	95	62.275	ENSSFOG00015002026	srp72	52	61.561	Scleropages_formosus
ENSHGLG00000003496	-	98	57.471	ENSSMAG00000007639	srp72	52	58.000	Scophthalmus_maximus
ENSHGLG00000003496	-	99	59.195	ENSSDUG00000007345	srp72	51	60.807	Seriola_dumerili
ENSHGLG00000003496	-	99	59.195	ENSSLDG00000021819	srp72	52	60.807	Seriola_lalandi_dorsalis
ENSHGLG00000003496	-	97	74.412	ENSSARG00000005804	SRP72	52	73.988	Sorex_araneus
ENSHGLG00000003496	-	97	67.059	ENSSPUG00000009740	SRP72	51	66.763	Sphenodon_punctatus
ENSHGLG00000003496	-	99	59.195	ENSSPAG00000011565	srp72	52	60.807	Stegastes_partitus
ENSHGLG00000003496	-	97	74.706	ENSSSCG00000008900	SRP72	51	74.706	Sus_scrofa
ENSHGLG00000003496	-	97	69.298	ENSTGUG00000004767	SRP72	51	69.006	Taeniopygia_guttata
ENSHGLG00000003496	-	95	60.479	ENSTRUG00000009831	srp72	50	60.180	Takifugu_rubripes
ENSHGLG00000003496	-	99	60.345	ENSTNIG00000013073	srp72	52	60.231	Tetraodon_nigroviridis
ENSHGLG00000003496	-	97	66.176	ENSTBEG00000007394	SRP72	51	66.176	Tupaia_belangeri
ENSHGLG00000003496	-	97	76.176	ENSTTRG00000010945	SRP72	55	75.723	Tursiops_truncatus
ENSHGLG00000003496	-	97	77.941	ENSUAMG00000001701	SRP72	91	77.457	Ursus_americanus
ENSHGLG00000003496	-	97	77.941	ENSUMAG00000008151	SRP72	52	77.457	Ursus_maritimus
ENSHGLG00000003496	-	97	76.765	ENSVPAG00000000458	SRP72	52	76.301	Vicugna_pacos
ENSHGLG00000003496	-	97	77.941	ENSVVUG00000006020	SRP72	52	77.457	Vulpes_vulpes
ENSHGLG00000003496	-	96	63.529	ENSXETG00000010205	srp72	55	62.931	Xenopus_tropicalis
ENSHGLG00000003496	-	67	46.667	ENSXCOG00000015488	srp72	93	46.383	Xiphophorus_couchianus
ENSHGLG00000003496	-	99	58.908	ENSXMAG00000018000	srp72	51	58.892	Xiphophorus_maculatus