EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000003564 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 443 bases
Position: chrJH602178.1:1046875-1047317
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000004853	RRM_5	PF13893.6	1.7e-08	1	1
ENSHGLP00000004853	RRM_1	PF00076.22	3.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000004917	-	345	-	ENSHGLP00000004853	114 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000003564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000003564's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000003564	-	62	31.944	ENSHGLG00000010919	-	52	31.944
ENSHGLG00000003564	-	96	80.180	ENSHGLG00000014428	-	96	80.180
ENSHGLG00000003564	-	70	85.000	ENSHGLG00000013918	-	64	85.000
ENSHGLG00000003564	-	84	33.010	ENSHGLG00000006125	-	72	33.010
ENSHGLG00000003564	-	68	37.500	ENSHGLG00000011055	RBMX	78	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000003564	-	98	79.508	ENSG00000076053	RBM7	99	79.508	Homo_sapiens
ENSHGLG00000003564	-	68	67.532	ENSACIG00000021769	-	83	67.532	Amphilophus_citrinellus
ENSHGLG00000003564	-	68	70.130	ENSATEG00000000596	-	82	70.130	Anabas_testudineus
ENSHGLG00000003564	-	73	90.361	ENSANAG00000031879	-	53	90.361	Aotus_nancymaae
ENSHGLG00000003564	-	72	89.024	ENSANAG00000031340	-	53	89.024	Aotus_nancymaae
ENSHGLG00000003564	-	73	91.566	ENSCJAG00000011949	-	55	91.566	Callithrix_jacchus
ENSHGLG00000003564	-	73	93.976	ENSCAFG00020002518	-	54	93.976	Canis_lupus_dingo
ENSHGLG00000003564	-	73	92.771	ENSCHOG00000012747	-	56	92.771	Choloepus_hoffmanni
ENSHGLG00000003564	-	70	65.000	ENSDORG00000000801	Rbm11	56	65.000	Dipodomys_ordii
ENSHGLG00000003564	-	76	64.368	ENSEBUG00000009746	rbm7	57	64.368	Eptatretus_burgeri
ENSHGLG00000003564	-	70	66.250	ENSFHEG00000000845	-	89	66.250	Fundulus_heteroclitus
ENSHGLG00000003564	-	91	82.301	ENSGGOG00000009941	-	84	82.301	Gorilla_gorilla
ENSHGLG00000003564	-	70	85.000	ENSHGLG00100015249	-	64	85.000	Heterocephalus_glaber_male
ENSHGLG00000003564	-	100	100.000	ENSHGLG00100001021	-	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000003564	-	96	71.930	ENSHGLG00100008973	-	99	71.930	Heterocephalus_glaber_male
ENSHGLG00000003564	-	96	80.180	ENSHGLG00100011703	-	96	80.180	Heterocephalus_glaber_male
ENSHGLG00000003564	-	68	67.949	ENSHCOG00000010866	-	82	67.949	Hippocampus_comes
ENSHGLG00000003564	-	70	53.750	ENSIPUG00000018209	rbm11	85	53.750	Ictalurus_punctatus
ENSHGLG00000003564	-	63	69.444	ENSKMAG00000001899	-	77	69.444	Kryptolebias_marmoratus
ENSHGLG00000003564	-	71	91.358	ENSMAUG00000017938	-	52	91.358	Mesocricetus_auratus
ENSHGLG00000003564	-	75	46.739	ENSMMOG00000004967	rbm7	88	46.739	Mola_mola
ENSHGLG00000003564	-	73	91.566	ENSMUSG00000042396	Rbm7	53	91.566	Mus_musculus
ENSHGLG00000003564	-	73	92.771	ENSODEG00000010164	-	56	92.771	Octodon_degus
ENSHGLG00000003564	-	68	63.636	ENSPMGG00000001523	rbm7	87	63.636	Periophthalmus_magnuspinnatus
ENSHGLG00000003564	-	78	64.045	ENSPMAG00000001518	-	97	64.045	Petromyzon_marinus
ENSHGLG00000003564	-	70	65.000	ENSPCAG00000008368	-	56	65.000	Procavia_capensis
ENSHGLG00000003564	-	67	55.263	ENSPNAG00000009243	rbm11	84	55.263	Pygocentrus_nattereri
ENSHGLG00000003564	-	71	59.259	ENSSFOG00015013138	rbm11	64	59.259	Scleropages_formosus
ENSHGLG00000003564	-	89	60.577	ENSSPAG00000019320	rbm7	82	60.577	Stegastes_partitus
ENSHGLG00000003564	-	68	66.234	ENSXCOG00000001191	-	85	66.234	Xiphophorus_couchianus