EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000003619 (Gene tree)
Gene ID: -
Gene Symbol: SCAF8
Alias: KIAA1116|RBM16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 93937 bases
Position: chrJH602098.1:3465821-3559757
Accession: 101707400
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000004938	RRM_1	PF00076.22	1.7e-09	1	1
ENSHGLP00000004939	RRM_1	PF00076.22	1.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000005002	SCAF8-201	7524	XM_013076697	ENSHGLP00000004938	1271 (aa)	XP_012932152	UPI00034FD153
ENSHGLT00000005003	SCAF8-202	3816	-	ENSHGLP00000004939	1271 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000003619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000003619's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000003619	SCAF8	100	95.597	ENSG00000213079	SCAF8	100	95.597	Homo_sapiens
ENSHGLG00000003619	SCAF8	87	68.111	ENSAPOG00000015527	SCAF8	77	67.750	Acanthochromis_polyacanthus
ENSHGLG00000003619	SCAF8	99	94.299	ENSAMEG00000007583	SCAF8	97	92.730	Ailuropoda_melanoleuca
ENSHGLG00000003619	SCAF8	87	68.111	ENSAOCG00000002421	SCAF8	76	67.750	Amphiprion_ocellaris
ENSHGLG00000003619	SCAF8	89	65.505	ENSATEG00000006959	SCAF8	97	64.862	Anabas_testudineus
ENSHGLG00000003619	SCAF8	100	78.894	ENSAPLG00000005765	SCAF8	100	78.894	Anas_platyrhynchos
ENSHGLG00000003619	SCAF8	100	73.811	ENSACAG00000005282	SCAF8	100	73.655	Anolis_carolinensis
ENSHGLG00000003619	SCAF8	100	95.362	ENSANAG00000036184	SCAF8	100	95.362	Aotus_nancymaae
ENSHGLG00000003619	SCAF8	87	69.024	ENSACLG00000018828	SCAF8	80	68.620	Astatotilapia_calliptera
ENSHGLG00000003619	SCAF8	100	93.475	ENSBTAG00000031917	SCAF8	100	93.475	Bos_taurus
ENSHGLG00000003619	SCAF8	100	95.126	ENSCJAG00000012631	SCAF8	97	93.581	Callithrix_jacchus
ENSHGLG00000003619	SCAF8	99	94.541	ENSCAFG00000000570	SCAF8	99	94.541	Canis_familiaris
ENSHGLG00000003619	SCAF8	100	93.873	ENSCAFG00020015048	SCAF8	99	94.401	Canis_lupus_dingo
ENSHGLG00000003619	SCAF8	100	93.396	ENSCHIG00000025041	SCAF8	100	93.396	Capra_hircus
ENSHGLG00000003619	SCAF8	99	94.616	ENSTSYG00000010991	SCAF8	97	94.616	Carlito_syrichta
ENSHGLG00000003619	SCAF8	65	98.707	ENSCAPG00000003300	SCAF8	85	98.684	Cavia_aperea
ENSHGLG00000003619	SCAF8	99	89.802	ENSCPOG00000022216	-	99	89.012	Cavia_porcellus
ENSHGLG00000003619	SCAF8	100	95.047	ENSCCAG00000024952	SCAF8	100	95.047	Cebus_capucinus
ENSHGLG00000003619	SCAF8	100	96.069	ENSCATG00000035361	SCAF8	100	96.069	Cercocebus_atys
ENSHGLG00000003619	SCAF8	100	96.381	ENSCLAG00000004910	SCAF8	100	96.907	Chinchilla_lanigera
ENSHGLG00000003619	SCAF8	99	96.041	ENSCSAG00000013430	SCAF8	100	94.509	Chlorocebus_sabaeus
ENSHGLG00000003619	SCAF8	100	95.755	ENSCANG00000039499	SCAF8	99	95.721	Colobus_angolensis_palliatus
ENSHGLG00000003619	SCAF8	100	91.424	ENSCGRG00001020167	Scaf8	100	91.424	Cricetulus_griseus_chok1gshd
ENSHGLG00000003619	SCAF8	99	91.356	ENSCGRG00000004120	Scaf8	99	91.356	Cricetulus_griseus_crigri
ENSHGLG00000003619	SCAF8	87	65.663	ENSCSEG00000000043	-	78	66.867	Cynoglossus_semilaevis
ENSHGLG00000003619	SCAF8	59	66.535	ENSCVAG00000000925	SCAF8	56	66.010	Cyprinodon_variegatus
ENSHGLG00000003619	SCAF8	96	87.787	ENSDNOG00000025271	SCAF8	100	91.393	Dasypus_novemcinctus
ENSHGLG00000003619	SCAF8	99	92.880	ENSDORG00000006391	Scaf8	100	92.744	Dipodomys_ordii
ENSHGLG00000003619	SCAF8	100	94.266	ENSEASG00005018879	SCAF8	100	94.266	Equus_asinus_asinus
ENSHGLG00000003619	SCAF8	100	94.418	ENSECAG00000005540	SCAF8	100	94.418	Equus_caballus
ENSHGLG00000003619	SCAF8	82	69.638	ENSELUG00000002779	SCAF8	73	69.032	Esox_lucius
ENSHGLG00000003619	SCAF8	100	94.811	ENSFCAG00000023424	SCAF8	100	94.811	Felis_catus
ENSHGLG00000003619	SCAF8	100	78.210	ENSFALG00000012433	SCAF8	100	78.460	Ficedula_albicollis
ENSHGLG00000003619	SCAF8	99	98.176	ENSFDAG00000010335	SCAF8	99	98.176	Fukomys_damarensis
ENSHGLG00000003619	SCAF8	91	67.946	ENSFHEG00000008284	SCAF8	77	67.698	Fundulus_heteroclitus
ENSHGLG00000003619	SCAF8	80	56.305	ENSGMOG00000018812	SCAF8	77	60.593	Gadus_morhua
ENSHGLG00000003619	SCAF8	99	79.859	ENSGALG00000013635	SCAF8	99	78.911	Gallus_gallus
ENSHGLG00000003619	SCAF8	92	67.857	ENSGAFG00000018033	SCAF8	78	64.655	Gambusia_affinis
ENSHGLG00000003619	SCAF8	93	54.061	ENSGACG00000006909	SCAF8	100	55.144	Gasterosteus_aculeatus
ENSHGLG00000003619	SCAF8	63	72.325	ENSGAGG00000017820	-	88	72.325	Gopherus_agassizii
ENSHGLG00000003619	SCAF8	100	95.597	ENSGGOG00000008645	SCAF8	100	95.597	Gorilla_gorilla
ENSHGLG00000003619	SCAF8	87	68.902	ENSHBUG00000019537	SCAF8	80	68.498	Haplochromis_burtoni
ENSHGLG00000003619	SCAF8	100	100.000	ENSHGLG00100004708	SCAF8	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000003619	SCAF8	99	95.804	ENSSTOG00000026043	SCAF8	99	95.804	Ictidomys_tridecemlineatus
ENSHGLG00000003619	SCAF8	100	91.745	ENSJJAG00000020480	Scaf8	100	91.745	Jaculus_jaculus
ENSHGLG00000003619	SCAF8	93	67.629	ENSKMAG00000012767	SCAF8	78	67.268	Kryptolebias_marmoratus
ENSHGLG00000003619	SCAF8	67	75.926	ENSLBEG00000012484	-	59	76.071	Labrus_bergylta
ENSHGLG00000003619	SCAF8	100	61.406	ENSLOCG00000016856	SCAF8	100	60.625	Lepisosteus_oculatus
ENSHGLG00000003619	SCAF8	100	91.994	ENSLAFG00000000022	SCAF8	100	92.543	Loxodonta_africana
ENSHGLG00000003619	SCAF8	100	96.069	ENSMFAG00000032738	SCAF8	100	96.069	Macaca_fascicularis
ENSHGLG00000003619	SCAF8	100	96.069	ENSMMUG00000015163	SCAF8	100	96.069	Macaca_mulatta
ENSHGLG00000003619	SCAF8	100	96.069	ENSMNEG00000043466	SCAF8	100	96.069	Macaca_nemestrina
ENSHGLG00000003619	SCAF8	99	96.041	ENSMLEG00000034845	SCAF8	99	96.038	Mandrillus_leucophaeus
ENSHGLG00000003619	SCAF8	83	65.051	ENSMAMG00000009457	SCAF8	76	64.158	Mastacembelus_armatus
ENSHGLG00000003619	SCAF8	87	68.902	ENSMZEG00005005698	SCAF8	80	68.498	Maylandia_zebra
ENSHGLG00000003619	SCAF8	99	79.453	ENSMGAG00000012762	SCAF8	100	79.021	Meleagris_gallopavo
ENSHGLG00000003619	SCAF8	99	90.722	ENSMAUG00000009513	Scaf8	100	90.722	Mesocricetus_auratus
ENSHGLG00000003619	SCAF8	100	94.187	ENSMICG00000028965	SCAF8	100	94.030	Microcebus_murinus
ENSHGLG00000003619	SCAF8	100	92.054	ENSMOCG00000014950	Scaf8	100	92.054	Microtus_ochrogaster
ENSHGLG00000003619	SCAF8	84	64.594	ENSMMOG00000002216	SCAF8	78	63.579	Mola_mola
ENSHGLG00000003619	SCAF8	99	85.613	ENSMODG00000008301	SCAF8	99	85.613	Monodelphis_domestica
ENSHGLG00000003619	SCAF8	87	68.370	ENSMALG00000011584	SCAF8	78	68.127	Monopterus_albus
ENSHGLG00000003619	SCAF8	100	91.109	MGP_CAROLIEiJ_G0021016	Scaf8	100	91.109	Mus_caroli
ENSHGLG00000003619	SCAF8	100	91.188	ENSMUSG00000046201	Scaf8	100	91.188	Mus_musculus
ENSHGLG00000003619	SCAF8	100	91.660	MGP_PahariEiJ_G0023334	Scaf8	100	91.660	Mus_pahari
ENSHGLG00000003619	SCAF8	99	93.903	ENSMPUG00000001974	SCAF8	100	92.421	Mustela_putorius_furo
ENSHGLG00000003619	SCAF8	100	92.138	ENSMLUG00000029190	SCAF8	100	92.138	Myotis_lucifugus
ENSHGLG00000003619	SCAF8	100	92.526	ENSNGAG00000012332	Scaf8	100	92.526	Nannospalax_galili
ENSHGLG00000003619	SCAF8	100	52.311	ENSNBRG00000009067	SCAF8	100	52.322	Neolamprologus_brichardi
ENSHGLG00000003619	SCAF8	100	94.275	ENSNLEG00000015509	SCAF8	99	94.229	Nomascus_leucogenys
ENSHGLG00000003619	SCAF8	70	92.857	ENSOPRG00000018413	-	76	93.939	Ochotona_princeps
ENSHGLG00000003619	SCAF8	100	97.484	ENSODEG00000007296	SCAF8	100	97.484	Octodon_degus
ENSHGLG00000003619	SCAF8	100	55.324	ENSONIG00000008119	SCAF8	99	55.349	Oreochromis_niloticus
ENSHGLG00000003619	SCAF8	99	95.645	ENSOCUG00000026063	SCAF8	99	95.645	Oryctolagus_cuniculus
ENSHGLG00000003619	SCAF8	86	68.519	ENSORLG00000017358	SCAF8	77	68.375	Oryzias_latipes
ENSHGLG00000003619	SCAF8	86	68.642	ENSORLG00020002214	SCAF8	78	67.389	Oryzias_latipes_hni
ENSHGLG00000003619	SCAF8	86	68.765	ENSORLG00015015779	SCAF8	78	68.765	Oryzias_latipes_hsok
ENSHGLG00000003619	SCAF8	86	68.765	ENSOMEG00000015471	SCAF8	77	68.765	Oryzias_melastigma
ENSHGLG00000003619	SCAF8	99	94.537	ENSOGAG00000034223	SCAF8	97	93.039	Otolemur_garnettii
ENSHGLG00000003619	SCAF8	99	93.344	ENSOARG00000004159	SCAF8	100	93.270	Ovis_aries
ENSHGLG00000003619	SCAF8	100	95.440	ENSPPAG00000039826	SCAF8	100	95.440	Pan_paniscus
ENSHGLG00000003619	SCAF8	100	94.890	ENSPPRG00000023175	SCAF8	100	94.890	Panthera_pardus
ENSHGLG00000003619	SCAF8	99	94.778	ENSPTIG00000014836	SCAF8	100	94.778	Panthera_tigris_altaica
ENSHGLG00000003619	SCAF8	100	95.597	ENSPTRG00000018727	SCAF8	100	95.597	Pan_troglodytes
ENSHGLG00000003619	SCAF8	100	95.912	ENSPANG00000017489	SCAF8	100	93.947	Papio_anubis
ENSHGLG00000003619	SCAF8	95	71.985	ENSPKIG00000021212	SCAF8	100	71.098	Paramormyrops_kingsleyae
ENSHGLG00000003619	SCAF8	89	73.775	ENSPSIG00000008614	SCAF8	94	76.718	Pelodiscus_sinensis
ENSHGLG00000003619	SCAF8	99	92.070	ENSPEMG00000010531	Scaf8	100	92.070	Peromyscus_maniculatus_bairdii
ENSHGLG00000003619	SCAF8	100	86.499	ENSPCIG00000001141	SCAF8	100	86.499	Phascolarctos_cinereus
ENSHGLG00000003619	SCAF8	100	54.726	ENSPFOG00000004176	SCAF8	100	54.601	Poecilia_formosa
ENSHGLG00000003619	SCAF8	86	68.395	ENSPLAG00000021432	SCAF8	77	67.901	Poecilia_latipinna
ENSHGLG00000003619	SCAF8	86	68.519	ENSPMEG00000007591	SCAF8	84	67.313	Poecilia_mexicana
ENSHGLG00000003619	SCAF8	86	68.395	ENSPREG00000000652	SCAF8	77	67.901	Poecilia_reticulata
ENSHGLG00000003619	SCAF8	100	93.956	ENSPPYG00000017121	SCAF8	100	93.642	Pongo_abelii
ENSHGLG00000003619	SCAF8	85	96.985	ENSPCAG00000013044	SCAF8	90	96.985	Procavia_capensis
ENSHGLG00000003619	SCAF8	100	94.501	ENSPCOG00000002067	SCAF8	99	94.299	Propithecus_coquereli
ENSHGLG00000003619	SCAF8	98	90.575	ENSPVAG00000005582	SCAF8	100	91.693	Pteropus_vampyrus
ENSHGLG00000003619	SCAF8	87	69.024	ENSPNYG00000007277	SCAF8	80	68.620	Pundamilia_nyererei
ENSHGLG00000003619	SCAF8	86	68.054	ENSPNAG00000024740	SCAF8	82	68.299	Pygocentrus_nattereri
ENSHGLG00000003619	SCAF8	100	91.188	ENSRNOG00000016919	Scaf8	100	91.188	Rattus_norvegicus
ENSHGLG00000003619	SCAF8	100	95.833	ENSRBIG00000035769	SCAF8	100	95.833	Rhinopithecus_bieti
ENSHGLG00000003619	SCAF8	100	95.755	ENSRROG00000013580	SCAF8	100	95.755	Rhinopithecus_roxellana
ENSHGLG00000003619	SCAF8	100	95.047	ENSSBOG00000027023	SCAF8	100	95.047	Saimiri_boliviensis_boliviensis
ENSHGLG00000003619	SCAF8	100	86.039	ENSSHAG00000009915	SCAF8	100	86.039	Sarcophilus_harrisii
ENSHGLG00000003619	SCAF8	100	54.012	ENSSFOG00015009481	SCAF8	93	68.947	Scleropages_formosus
ENSHGLG00000003619	SCAF8	87	67.788	ENSSMAG00000008275	SCAF8	77	67.188	Scophthalmus_maximus
ENSHGLG00000003619	SCAF8	100	77.225	ENSSPUG00000015219	SCAF8	100	76.998	Sphenodon_punctatus
ENSHGLG00000003619	SCAF8	100	94.261	ENSSSCG00000004070	SCAF8	100	94.261	Sus_scrofa
ENSHGLG00000003619	SCAF8	99	79.717	ENSTGUG00000011151	SCAF8	100	79.890	Taeniopygia_guttata
ENSHGLG00000003619	SCAF8	86	67.407	ENSTRUG00000009243	SCAF8	78	67.407	Takifugu_rubripes
ENSHGLG00000003619	SCAF8	87	65.223	ENSTNIG00000016885	SCAF8	99	65.343	Tetraodon_nigroviridis
ENSHGLG00000003619	SCAF8	99	93.582	ENSTTRG00000014538	SCAF8	100	93.582	Tursiops_truncatus
ENSHGLG00000003619	SCAF8	100	94.104	ENSUAMG00000024736	SCAF8	99	94.057	Ursus_americanus
ENSHGLG00000003619	SCAF8	98	94.066	ENSUMAG00000013404	SCAF8	100	94.066	Ursus_maritimus
ENSHGLG00000003619	SCAF8	67	84.302	ENSVPAG00000012465	SCAF8	99	83.834	Vicugna_pacos
ENSHGLG00000003619	SCAF8	99	94.616	ENSVVUG00000007532	SCAF8	100	94.547	Vulpes_vulpes
ENSHGLG00000003619	SCAF8	100	61.258	ENSXETG00000013132	scaf8	100	61.198	Xenopus_tropicalis
ENSHGLG00000003619	SCAF8	92	68.395	ENSXMAG00000019192	SCAF8	78	68.025	Xiphophorus_maculatus