EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000003649 (Gene tree)
Gene ID: -
Gene Symbol: TRNT1
Alias: -
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 32104 bases
Position: chrJH602086.1:13362983-13395086
Accession: 101701523
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000004979	PolyA_pol	PF01743.20	2.2e-33	1	1
ENSHGLP00000004980	PolyA_pol	PF01743.20	2.2e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000005043	-	2024	-	ENSHGLP00000004979	434 (aa)	XP_021121712	A0A0P6J0V4
ENSHGLT00000005044	-	2481	XM_004854225	ENSHGLP00000004980	434 (aa)	XP_004854282	A0A0P6J0V4

Gene Model

Click here to download ENSHGLG00000003649's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000003649's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000003649	TRNT1	100	89.655	ENSHGLG00000000221	-	100	89.655

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000003649	TRNT1	99	92.379	ENSG00000072756	TRNT1	99	92.379	Homo_sapiens
ENSHGLG00000003649	TRNT1	98	65.330	ENSAPOG00000013687	trnt1	99	65.330	Acanthochromis_polyacanthus
ENSHGLG00000003649	TRNT1	99	90.575	ENSAMEG00000014520	TRNT1	99	90.575	Ailuropoda_melanoleuca
ENSHGLG00000003649	TRNT1	98	67.059	ENSACIG00000021706	trnt1	99	67.059	Amphilophus_citrinellus
ENSHGLG00000003649	TRNT1	98	66.588	ENSAOCG00000024612	trnt1	99	66.588	Amphiprion_ocellaris
ENSHGLG00000003649	TRNT1	96	59.952	ENSAPEG00000022627	trnt1	97	59.952	Amphiprion_percula
ENSHGLG00000003649	TRNT1	93	69.479	ENSATEG00000008928	trnt1	99	69.479	Anabas_testudineus
ENSHGLG00000003649	TRNT1	89	75.711	ENSAPLG00000004258	TRNT1	96	75.711	Anas_platyrhynchos
ENSHGLG00000003649	TRNT1	99	75.058	ENSACAG00000005657	TRNT1	99	75.058	Anolis_carolinensis
ENSHGLG00000003649	TRNT1	99	91.686	ENSANAG00000024802	TRNT1	99	91.686	Aotus_nancymaae
ENSHGLG00000003649	TRNT1	98	66.588	ENSACLG00000022227	trnt1	99	66.588	Astatotilapia_calliptera
ENSHGLG00000003649	TRNT1	97	67.933	ENSAMXG00000003960	trnt1	97	67.933	Astyanax_mexicanus
ENSHGLG00000003649	TRNT1	99	89.838	ENSBTAG00000019534	TRNT1	99	89.838	Bos_taurus
ENSHGLG00000003649	TRNT1	93	44.819	WBGene00010089	hpo-31	94	44.819	Caenorhabditis_elegans
ENSHGLG00000003649	TRNT1	99	91.686	ENSCJAG00000015466	TRNT1	99	91.686	Callithrix_jacchus
ENSHGLG00000003649	TRNT1	99	89.838	ENSCAFG00000005985	TRNT1	99	89.838	Canis_familiaris
ENSHGLG00000003649	TRNT1	99	89.838	ENSCAFG00020014746	TRNT1	99	89.838	Canis_lupus_dingo
ENSHGLG00000003649	TRNT1	99	89.607	ENSCHIG00000007030	TRNT1	99	89.607	Capra_hircus
ENSHGLG00000003649	TRNT1	99	92.379	ENSTSYG00000013390	TRNT1	99	92.379	Carlito_syrichta
ENSHGLG00000003649	TRNT1	87	75.397	ENSCAPG00000006891	TRNT1	100	75.397	Cavia_aperea
ENSHGLG00000003649	TRNT1	100	93.548	ENSCPOG00000007849	TRNT1	100	94.030	Cavia_porcellus
ENSHGLG00000003649	TRNT1	95	88.434	ENSCCAG00000002919	TRNT1	99	90.500	Cebus_capucinus
ENSHGLG00000003649	TRNT1	100	91.935	ENSCATG00000031985	TRNT1	99	91.935	Cercocebus_atys
ENSHGLG00000003649	TRNT1	100	94.931	ENSCLAG00000005186	TRNT1	100	94.931	Chinchilla_lanigera
ENSHGLG00000003649	TRNT1	99	92.379	ENSCSAG00000011052	TRNT1	99	92.379	Chlorocebus_sabaeus
ENSHGLG00000003649	TRNT1	85	89.604	ENSCHOG00000005712	TRNT1	85	89.604	Choloepus_hoffmanni
ENSHGLG00000003649	TRNT1	94	81.174	ENSCPBG00000017636	TRNT1	93	81.174	Chrysemys_picta_bellii
ENSHGLG00000003649	TRNT1	93	44.526	ENSCING00000007069	-	99	44.526	Ciona_intestinalis
ENSHGLG00000003649	TRNT1	97	44.575	ENSCSAVG00000007494	-	99	44.575	Ciona_savignyi
ENSHGLG00000003649	TRNT1	99	91.917	ENSCANG00000039030	TRNT1	99	91.917	Colobus_angolensis_palliatus
ENSHGLG00000003649	TRNT1	99	91.686	ENSCGRG00001009998	Trnt1	99	91.686	Cricetulus_griseus_chok1gshd
ENSHGLG00000003649	TRNT1	99	91.686	ENSCGRG00000013410	Trnt1	99	91.686	Cricetulus_griseus_crigri
ENSHGLG00000003649	TRNT1	94	67.402	ENSCSEG00000008157	trnt1	96	67.402	Cynoglossus_semilaevis
ENSHGLG00000003649	TRNT1	94	68.627	ENSCVAG00000019770	trnt1	96	68.627	Cyprinodon_variegatus
ENSHGLG00000003649	TRNT1	97	68.646	ENSDARG00000075297	trnt1	97	68.646	Danio_rerio
ENSHGLG00000003649	TRNT1	99	89.607	ENSDNOG00000008837	TRNT1	99	89.607	Dasypus_novemcinctus
ENSHGLG00000003649	TRNT1	99	89.838	ENSDORG00000014035	Trnt1	99	89.838	Dipodomys_ordii
ENSHGLG00000003649	TRNT1	92	49.136	FBgn0037369	CG2100	83	49.136	Drosophila_melanogaster
ENSHGLG00000003649	TRNT1	57	87.952	ENSETEG00000018177	TRNT1	100	87.952	Echinops_telfairi
ENSHGLG00000003649	TRNT1	93	61.538	ENSEBUG00000012779	-	95	61.538	Eptatretus_burgeri
ENSHGLG00000003649	TRNT1	99	90.762	ENSEASG00005003577	TRNT1	99	90.762	Equus_asinus_asinus
ENSHGLG00000003649	TRNT1	99	90.993	ENSECAG00000014420	TRNT1	99	90.993	Equus_caballus
ENSHGLG00000003649	TRNT1	99	87.298	ENSEEUG00000009567	TRNT1	99	87.298	Erinaceus_europaeus
ENSHGLG00000003649	TRNT1	98	68.065	ENSELUG00000003802	trnt1	99	68.065	Esox_lucius
ENSHGLG00000003649	TRNT1	99	90.762	ENSFCAG00000026805	TRNT1	99	90.762	Felis_catus
ENSHGLG00000003649	TRNT1	88	74.479	ENSFALG00000013539	TRNT1	99	74.479	Ficedula_albicollis
ENSHGLG00000003649	TRNT1	100	94.700	ENSFDAG00000018412	TRNT1	100	94.700	Fukomys_damarensis
ENSHGLG00000003649	TRNT1	96	67.139	ENSFHEG00000019294	trnt1	99	67.139	Fundulus_heteroclitus
ENSHGLG00000003649	TRNT1	94	68.059	ENSGMOG00000007460	trnt1	96	68.059	Gadus_morhua
ENSHGLG00000003649	TRNT1	95	73.430	ENSGALG00000017368	TRNT1	96	73.430	Gallus_gallus
ENSHGLG00000003649	TRNT1	94	68.137	ENSGAFG00000008647	trnt1	96	68.137	Gambusia_affinis
ENSHGLG00000003649	TRNT1	98	64.471	ENSGACG00000011903	trnt1	99	64.471	Gasterosteus_aculeatus
ENSHGLG00000003649	TRNT1	99	78.372	ENSGAGG00000020942	TRNT1	97	78.372	Gopherus_agassizii
ENSHGLG00000003649	TRNT1	99	92.610	ENSGGOG00000015286	TRNT1	99	92.610	Gorilla_gorilla
ENSHGLG00000003649	TRNT1	98	66.588	ENSHBUG00000002797	trnt1	99	66.588	Haplochromis_burtoni
ENSHGLG00000003649	TRNT1	100	98.848	ENSHGLG00100016421	TRNT1	100	98.848	Heterocephalus_glaber_male
ENSHGLG00000003649	TRNT1	94	66.912	ENSHCOG00000010618	trnt1	96	66.912	Hippocampus_comes
ENSHGLG00000003649	TRNT1	96	67.952	ENSIPUG00000000971	trnt1	96	67.952	Ictalurus_punctatus
ENSHGLG00000003649	TRNT1	99	89.145	ENSSTOG00000000150	TRNT1	98	93.564	Ictidomys_tridecemlineatus
ENSHGLG00000003649	TRNT1	99	91.455	ENSJJAG00000018561	Trnt1	99	91.455	Jaculus_jaculus
ENSHGLG00000003649	TRNT1	96	66.745	ENSKMAG00000011307	trnt1	99	66.745	Kryptolebias_marmoratus
ENSHGLG00000003649	TRNT1	94	62.683	ENSLBEG00000019457	trnt1	97	62.683	Labrus_bergylta
ENSHGLG00000003649	TRNT1	99	72.055	ENSLACG00000013227	TRNT1	99	72.055	Latimeria_chalumnae
ENSHGLG00000003649	TRNT1	97	71.259	ENSLOCG00000011105	trnt1	95	71.259	Lepisosteus_oculatus
ENSHGLG00000003649	TRNT1	99	91.224	ENSLAFG00000023191	TRNT1	99	91.224	Loxodonta_africana
ENSHGLG00000003649	TRNT1	100	92.166	ENSMFAG00000045113	TRNT1	99	92.166	Macaca_fascicularis
ENSHGLG00000003649	TRNT1	100	92.166	ENSMMUG00000017983	TRNT1	99	92.166	Macaca_mulatta
ENSHGLG00000003649	TRNT1	100	92.166	ENSMNEG00000037805	TRNT1	99	92.166	Macaca_nemestrina
ENSHGLG00000003649	TRNT1	88	93.194	ENSMLEG00000033671	TRNT1	99	93.194	Mandrillus_leucophaeus
ENSHGLG00000003649	TRNT1	98	66.824	ENSMAMG00000023401	trnt1	99	66.824	Mastacembelus_armatus
ENSHGLG00000003649	TRNT1	98	66.588	ENSMZEG00005009141	trnt1	99	66.588	Maylandia_zebra
ENSHGLG00000003649	TRNT1	74	75.312	ENSMGAG00000009971	TRNT1	99	75.312	Meleagris_gallopavo
ENSHGLG00000003649	TRNT1	99	91.917	ENSMAUG00000020707	Trnt1	99	91.917	Mesocricetus_auratus
ENSHGLG00000003649	TRNT1	99	92.379	ENSMICG00000016615	TRNT1	99	92.379	Microcebus_murinus
ENSHGLG00000003649	TRNT1	99	90.762	ENSMOCG00000004539	Trnt1	99	90.762	Microtus_ochrogaster
ENSHGLG00000003649	TRNT1	98	65.647	ENSMMOG00000010742	trnt1	99	65.647	Mola_mola
ENSHGLG00000003649	TRNT1	99	83.372	ENSMODG00000004368	TRNT1	99	83.372	Monodelphis_domestica
ENSHGLG00000003649	TRNT1	98	65.647	ENSMALG00000008376	trnt1	99	65.647	Monopterus_albus
ENSHGLG00000003649	TRNT1	99	93.240	MGP_CAROLIEiJ_G0028698	Trnt1	99	93.240	Mus_caroli
ENSHGLG00000003649	TRNT1	99	92.774	ENSMUSG00000013736	Trnt1	99	92.774	Mus_musculus
ENSHGLG00000003649	TRNT1	99	91.917	MGP_PahariEiJ_G0022449	Trnt1	100	92.118	Mus_pahari
ENSHGLG00000003649	TRNT1	99	92.774	MGP_SPRETEiJ_G0029726	Trnt1	99	92.774	Mus_spretus
ENSHGLG00000003649	TRNT1	99	91.455	ENSMPUG00000017017	TRNT1	99	91.455	Mustela_putorius_furo
ENSHGLG00000003649	TRNT1	89	86.753	ENSMLUG00000011864	TRNT1	99	86.753	Myotis_lucifugus
ENSHGLG00000003649	TRNT1	99	91.455	ENSNGAG00000000537	Trnt1	99	91.455	Nannospalax_galili
ENSHGLG00000003649	TRNT1	79	66.667	ENSNBRG00000023606	trnt1	99	66.667	Neolamprologus_brichardi
ENSHGLG00000003649	TRNT1	99	92.610	ENSNLEG00000003226	TRNT1	99	92.610	Nomascus_leucogenys
ENSHGLG00000003649	TRNT1	99	83.834	ENSMEUG00000004684	TRNT1	99	83.834	Notamacropus_eugenii
ENSHGLG00000003649	TRNT1	88	79.167	ENSOPRG00000015067	TRNT1	99	79.167	Ochotona_princeps
ENSHGLG00000003649	TRNT1	100	94.470	ENSODEG00000007597	TRNT1	100	94.470	Octodon_degus
ENSHGLG00000003649	TRNT1	98	66.588	ENSONIG00000020273	trnt1	98	66.588	Oreochromis_niloticus
ENSHGLG00000003649	TRNT1	99	73.611	ENSOANG00000007514	TRNT1	99	73.611	Ornithorhynchus_anatinus
ENSHGLG00000003649	TRNT1	99	84.758	ENSOCUG00000008580	TRNT1	99	84.758	Oryctolagus_cuniculus
ENSHGLG00000003649	TRNT1	97	65.476	ENSORLG00000003165	trnt1	99	65.476	Oryzias_latipes
ENSHGLG00000003649	TRNT1	97	65.714	ENSORLG00020022060	trnt1	99	65.714	Oryzias_latipes_hni
ENSHGLG00000003649	TRNT1	96	64.387	ENSORLG00015018915	trnt1	99	64.387	Oryzias_latipes_hsok
ENSHGLG00000003649	TRNT1	95	65.291	ENSOMEG00000003331	trnt1	97	65.291	Oryzias_melastigma
ENSHGLG00000003649	TRNT1	99	89.376	ENSOARG00000008631	TRNT1	99	89.376	Ovis_aries
ENSHGLG00000003649	TRNT1	99	92.610	ENSPPAG00000043566	TRNT1	99	92.610	Pan_paniscus
ENSHGLG00000003649	TRNT1	99	90.762	ENSPPRG00000001327	TRNT1	99	90.762	Panthera_pardus
ENSHGLG00000003649	TRNT1	99	90.762	ENSPTIG00000011448	TRNT1	99	90.762	Panthera_tigris_altaica
ENSHGLG00000003649	TRNT1	99	92.610	ENSPTRG00000014564	TRNT1	99	92.610	Pan_troglodytes
ENSHGLG00000003649	TRNT1	100	91.935	ENSPANG00000025944	TRNT1	99	91.935	Papio_anubis
ENSHGLG00000003649	TRNT1	94	69.682	ENSPKIG00000020015	trnt1	95	69.682	Paramormyrops_kingsleyae
ENSHGLG00000003649	TRNT1	91	79.798	ENSPSIG00000017356	TRNT1	99	81.389	Pelodiscus_sinensis
ENSHGLG00000003649	TRNT1	98	67.059	ENSPMGG00000008888	trnt1	98	67.059	Periophthalmus_magnuspinnatus
ENSHGLG00000003649	TRNT1	99	92.379	ENSPEMG00000019845	Trnt1	99	92.379	Peromyscus_maniculatus_bairdii
ENSHGLG00000003649	TRNT1	99	83.834	ENSPCIG00000030436	TRNT1	99	83.834	Phascolarctos_cinereus
ENSHGLG00000003649	TRNT1	94	67.647	ENSPFOG00000006194	trnt1	96	67.647	Poecilia_formosa
ENSHGLG00000003649	TRNT1	94	67.647	ENSPLAG00000015623	trnt1	99	67.494	Poecilia_latipinna
ENSHGLG00000003649	TRNT1	94	67.647	ENSPMEG00000012216	trnt1	99	67.494	Poecilia_mexicana
ENSHGLG00000003649	TRNT1	94	67.561	ENSPREG00000021470	trnt1	96	67.561	Poecilia_reticulata
ENSHGLG00000003649	TRNT1	99	92.841	ENSPPYG00000013702	TRNT1	99	92.841	Pongo_abelii
ENSHGLG00000003649	TRNT1	88	90.078	ENSPCAG00000001951	TRNT1	100	90.078	Procavia_capensis
ENSHGLG00000003649	TRNT1	99	92.379	ENSPCOG00000022228	TRNT1	99	92.379	Propithecus_coquereli
ENSHGLG00000003649	TRNT1	88	88.512	ENSPVAG00000008784	TRNT1	99	88.512	Pteropus_vampyrus
ENSHGLG00000003649	TRNT1	98	66.588	ENSPNYG00000003120	trnt1	99	66.588	Pundamilia_nyererei
ENSHGLG00000003649	TRNT1	97	67.458	ENSPNAG00000000565	trnt1	97	67.458	Pygocentrus_nattereri
ENSHGLG00000003649	TRNT1	99	93.473	ENSRNOG00000006432	Trnt1	99	93.473	Rattus_norvegicus
ENSHGLG00000003649	TRNT1	99	89.838	ENSRBIG00000042632	TRNT1	99	89.838	Rhinopithecus_bieti
ENSHGLG00000003649	TRNT1	99	91.686	ENSRROG00000036866	TRNT1	99	91.686	Rhinopithecus_roxellana
ENSHGLG00000003649	TRNT1	99	91.686	ENSSBOG00000021208	TRNT1	99	91.686	Saimiri_boliviensis_boliviensis
ENSHGLG00000003649	TRNT1	99	83.141	ENSSHAG00000018861	TRNT1	99	83.141	Sarcophilus_harrisii
ENSHGLG00000003649	TRNT1	94	70.270	ENSSFOG00015020844	trnt1	94	70.270	Scleropages_formosus
ENSHGLG00000003649	TRNT1	98	67.059	ENSSMAG00000015432	trnt1	97	67.059	Scophthalmus_maximus
ENSHGLG00000003649	TRNT1	98	65.647	ENSSDUG00000012320	trnt1	99	65.647	Seriola_dumerili
ENSHGLG00000003649	TRNT1	56	62.656	ENSSLDG00000016463	-	96	60.474	Seriola_lalandi_dorsalis
ENSHGLG00000003649	TRNT1	98	65.647	ENSSLDG00000009325	trnt1	99	65.647	Seriola_lalandi_dorsalis
ENSHGLG00000003649	TRNT1	88	81.462	ENSSPUG00000014153	TRNT1	99	81.462	Sphenodon_punctatus
ENSHGLG00000003649	TRNT1	98	65.647	ENSSPAG00000021005	trnt1	99	65.647	Stegastes_partitus
ENSHGLG00000003649	TRNT1	99	90.531	ENSSSCG00000011529	TRNT1	99	90.531	Sus_scrofa
ENSHGLG00000003649	TRNT1	93	74.568	ENSTGUG00000010192	TRNT1	99	74.568	Taeniopygia_guttata
ENSHGLG00000003649	TRNT1	98	66.588	ENSTRUG00000001088	trnt1	99	66.588	Takifugu_rubripes
ENSHGLG00000003649	TRNT1	99	66.589	ENSTNIG00000007363	trnt1	99	66.589	Tetraodon_nigroviridis
ENSHGLG00000003649	TRNT1	70	77.528	ENSTBEG00000006367	TRNT1	100	77.528	Tupaia_belangeri
ENSHGLG00000003649	TRNT1	99	89.607	ENSTTRG00000007803	TRNT1	99	89.607	Tursiops_truncatus
ENSHGLG00000003649	TRNT1	99	90.069	ENSUAMG00000022574	TRNT1	99	90.069	Ursus_americanus
ENSHGLG00000003649	TRNT1	99	90.531	ENSUMAG00000024092	TRNT1	99	90.531	Ursus_maritimus
ENSHGLG00000003649	TRNT1	99	90.069	ENSVVUG00000012810	TRNT1	99	90.069	Vulpes_vulpes
ENSHGLG00000003649	TRNT1	95	65.144	ENSXETG00000025091	trnt1	99	65.920	Xenopus_tropicalis
ENSHGLG00000003649	TRNT1	94	68.137	ENSXCOG00000010150	trnt1	96	68.137	Xiphophorus_couchianus
ENSHGLG00000003649	TRNT1	94	67.647	ENSXMAG00000002227	trnt1	96	67.647	Xiphophorus_maculatus