EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000003822 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 3795 bases
Position: chrJH602101.1:11623930-11627724
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000005225	Upf2	PF04050.14	1.3e-30	1	1
ENSHGLP00000005225	MIF4G	PF02854.19	3.1e-43	1	2
ENSHGLP00000005225	MIF4G	PF02854.19	3.1e-43	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000005294	-	3576	-	ENSHGLP00000005225	1191 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000003822's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000003822's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000003822	-	99	87.313	ENSHGLG00000015176	-	99	88.337

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000003822	-	99	84.894	ENSG00000151461	UPF2	99	85.759	Homo_sapiens
ENSHGLG00000003822	-	99	68.755	ENSAPOG00000015837	UPF2	100	68.755	Acanthochromis_polyacanthus
ENSHGLG00000003822	-	99	85.433	ENSAMEG00000004586	UPF2	99	86.929	Ailuropoda_melanoleuca
ENSHGLG00000003822	-	99	72.984	ENSACIG00000018078	UPF2	100	72.905	Amphilophus_citrinellus
ENSHGLG00000003822	-	99	72.869	ENSAOCG00000016766	UPF2	99	72.869	Amphiprion_ocellaris
ENSHGLG00000003822	-	99	72.791	ENSAPEG00000019084	UPF2	99	72.791	Amphiprion_percula
ENSHGLG00000003822	-	99	72.756	ENSATEG00000021677	UPF2	99	72.678	Anabas_testudineus
ENSHGLG00000003822	-	99	77.044	ENSAPLG00000010287	UPF2	90	80.940	Anas_platyrhynchos
ENSHGLG00000003822	-	99	80.000	ENSACAG00000009259	UPF2	99	81.024	Anolis_carolinensis
ENSHGLG00000003822	-	99	78.436	ENSANAG00000028451	UPF2	99	76.935	Aotus_nancymaae
ENSHGLG00000003822	-	99	72.848	ENSACLG00000012696	UPF2	99	72.770	Astatotilapia_calliptera
ENSHGLG00000003822	-	99	72.557	ENSAMXG00000013700	UPF2	99	73.339	Astyanax_mexicanus
ENSHGLG00000003822	-	99	85.354	ENSBTAG00000000288	UPF2	99	86.614	Bos_taurus
ENSHGLG00000003822	-	99	85.276	ENSCJAG00000020685	UPF2	99	86.142	Callithrix_jacchus
ENSHGLG00000003822	-	99	85.354	ENSCAFG00000004839	UPF2	99	86.850	Canis_familiaris
ENSHGLG00000003822	-	96	93.878	ENSCAFG00020005882	UPF2	100	93.782	Canis_lupus_dingo
ENSHGLG00000003822	-	99	85.433	ENSCHIG00000020359	UPF2	99	86.693	Capra_hircus
ENSHGLG00000003822	-	99	84.646	ENSTSYG00000000935	UPF2	97	94.318	Carlito_syrichta
ENSHGLG00000003822	-	91	79.790	ENSCAPG00000016658	UPF2	95	80.140	Cavia_aperea
ENSHGLG00000003822	-	99	86.741	ENSCPOG00000008809	UPF2	100	87.780	Cavia_porcellus
ENSHGLG00000003822	-	99	80.315	ENSCCAG00000035991	UPF2	99	81.181	Cebus_capucinus
ENSHGLG00000003822	-	99	85.051	ENSCATG00000032679	UPF2	99	85.917	Cercocebus_atys
ENSHGLG00000003822	-	99	86.919	ENSCLAG00000011434	UPF2	99	87.943	Chinchilla_lanigera
ENSHGLG00000003822	-	99	85.051	ENSCSAG00000013372	UPF2	99	85.917	Chlorocebus_sabaeus
ENSHGLG00000003822	-	86	89.575	ENSCHOG00000000422	UPF2	89	89.189	Choloepus_hoffmanni
ENSHGLG00000003822	-	99	82.084	ENSCPBG00000027823	UPF2	100	82.005	Chrysemys_picta_bellii
ENSHGLG00000003822	-	79	43.071	ENSCSAVG00000007772	-	78	42.857	Ciona_savignyi
ENSHGLG00000003822	-	99	79.062	ENSCANG00000040396	UPF2	100	80.409	Colobus_angolensis_palliatus
ENSHGLG00000003822	-	99	84.397	ENSCGRG00001019347	Upf2	99	86.142	Cricetulus_griseus_chok1gshd
ENSHGLG00000003822	-	99	84.397	ENSCGRG00000017993	Upf2	99	86.142	Cricetulus_griseus_crigri
ENSHGLG00000003822	-	90	71.478	ENSCSEG00000003520	UPF2	91	71.662	Cynoglossus_semilaevis
ENSHGLG00000003822	-	99	72.598	ENSCVAG00000006167	UPF2	100	72.262	Cyprinodon_variegatus
ENSHGLG00000003822	-	99	85.433	ENSDNOG00000018160	UPF2	99	86.693	Dasypus_novemcinctus
ENSHGLG00000003822	-	99	84.634	ENSDORG00000002478	Upf2	99	86.772	Dipodomys_ordii
ENSHGLG00000003822	-	90	32.261	FBgn0029992	Upf2	81	41.667	Drosophila_melanogaster
ENSHGLG00000003822	-	72	100.000	ENSETEG00000011583	-	66	100.000	Echinops_telfairi
ENSHGLG00000003822	-	62	70.748	ENSEBUG00000012448	-	83	70.748	Eptatretus_burgeri
ENSHGLG00000003822	-	94	91.641	ENSEASG00005019274	UPF2	99	90.606	Equus_asinus_asinus
ENSHGLG00000003822	-	99	85.973	ENSECAG00000017022	UPF2	99	86.682	Equus_caballus
ENSHGLG00000003822	-	82	88.141	ENSEEUG00000007819	UPF2	82	88.782	Erinaceus_europaeus
ENSHGLG00000003822	-	99	72.084	ENSELUG00000012014	UPF2	100	72.240	Esox_lucius
ENSHGLG00000003822	-	99	93.889	ENSFCAG00000005785	UPF2	92	94.350	Felis_catus
ENSHGLG00000003822	-	99	81.102	ENSFALG00000001889	UPF2	98	82.047	Ficedula_albicollis
ENSHGLG00000003822	-	99	85.726	ENSFDAG00000014348	UPF2	99	87.549	Fukomys_damarensis
ENSHGLG00000003822	-	98	73.254	ENSFHEG00000009826	UPF2	99	72.857	Fundulus_heteroclitus
ENSHGLG00000003822	-	90	74.113	ENSGMOG00000005557	UPF2	100	69.867	Gadus_morhua
ENSHGLG00000003822	-	99	81.432	ENSGALG00000033772	UPF2	99	81.825	Gallus_gallus
ENSHGLG00000003822	-	99	72.166	ENSGAFG00000020867	UPF2	99	71.931	Gambusia_affinis
ENSHGLG00000003822	-	90	75.865	ENSGACG00000001080	UPF2	100	72.749	Gasterosteus_aculeatus
ENSHGLG00000003822	-	99	81.181	ENSGAGG00000002700	UPF2	99	82.126	Gopherus_agassizii
ENSHGLG00000003822	-	99	84.894	ENSGGOG00000001479	UPF2	99	85.759	Gorilla_gorilla
ENSHGLG00000003822	-	99	72.827	ENSHBUG00000004249	UPF2	100	72.749	Haplochromis_burtoni
ENSHGLG00000003822	-	99	86.480	ENSHGLG00100010036	UPF2	100	87.770	Heterocephalus_glaber_male
ENSHGLG00000003822	-	99	70.895	ENSHCOG00000004025	UPF2	99	70.950	Hippocampus_comes
ENSHGLG00000003822	-	99	71.819	ENSIPUG00000015524	UPF2	99	72.600	Ictalurus_punctatus
ENSHGLG00000003822	-	99	84.949	ENSSTOG00000013075	UPF2	99	87.008	Ictidomys_tridecemlineatus
ENSHGLG00000003822	-	99	84.700	ENSJJAG00000004913	Upf2	99	85.568	Jaculus_jaculus
ENSHGLG00000003822	-	98	73.312	ENSKMAG00000001071	UPF2	99	72.915	Kryptolebias_marmoratus
ENSHGLG00000003822	-	99	72.933	ENSLBEG00000016394	-	99	72.933	Labrus_bergylta
ENSHGLG00000003822	-	79	70.965	ENSLBEG00000000728	-	93	70.965	Labrus_bergylta
ENSHGLG00000003822	-	99	69.490	ENSLACG00000015945	UPF2	100	69.255	Latimeria_chalumnae
ENSHGLG00000003822	-	90	78.811	ENSLOCG00000015698	UPF2	99	75.887	Lepisosteus_oculatus
ENSHGLG00000003822	-	99	84.972	ENSMFAG00000043865	UPF2	99	85.838	Macaca_fascicularis
ENSHGLG00000003822	-	99	84.972	ENSMMUG00000008241	UPF2	99	85.838	Macaca_mulatta
ENSHGLG00000003822	-	80	83.122	ENSMNEG00000008062	UPF2	99	84.035	Macaca_nemestrina
ENSHGLG00000003822	-	94	87.923	ENSMLEG00000036120	UPF2	99	89.104	Mandrillus_leucophaeus
ENSHGLG00000003822	-	99	71.250	ENSMAMG00000018276	UPF2	99	72.521	Mastacembelus_armatus
ENSHGLG00000003822	-	99	72.848	ENSMZEG00005021595	UPF2	99	72.770	Maylandia_zebra
ENSHGLG00000003822	-	99	80.803	ENSMGAG00000004573	UPF2	99	81.353	Meleagris_gallopavo
ENSHGLG00000003822	-	99	82.530	ENSMAUG00000016512	Upf2	99	84.676	Mesocricetus_auratus
ENSHGLG00000003822	-	99	80.442	ENSMICG00000001716	UPF2	100	80.678	Microcebus_murinus
ENSHGLG00000003822	-	99	83.991	ENSMOCG00000008263	Upf2	99	85.658	Microtus_ochrogaster
ENSHGLG00000003822	-	99	70.584	ENSMMOG00000006528	UPF2	100	70.778	Mola_mola
ENSHGLG00000003822	-	99	83.701	ENSMODG00000016794	UPF2	99	84.646	Monodelphis_domestica
ENSHGLG00000003822	-	99	72.920	ENSMALG00000002663	UPF2	100	72.684	Monopterus_albus
ENSHGLG00000003822	-	99	84.003	MGP_CAROLIEiJ_G0023157	Upf2	99	88.931	Mus_caroli
ENSHGLG00000003822	-	99	84.003	ENSMUSG00000043241	Upf2	99	88.550	Mus_musculus
ENSHGLG00000003822	-	99	83.846	MGP_PahariEiJ_G0019217	Upf2	99	88.168	Mus_pahari
ENSHGLG00000003822	-	99	84.161	MGP_SPRETEiJ_G0024075	Upf2	99	88.550	Mus_spretus
ENSHGLG00000003822	-	99	85.197	ENSMPUG00000001064	UPF2	99	86.299	Mustela_putorius_furo
ENSHGLG00000003822	-	99	84.603	ENSMLUG00000000228	UPF2	100	85.782	Myotis_lucifugus
ENSHGLG00000003822	-	99	72.848	ENSNBRG00000013629	UPF2	99	72.770	Neolamprologus_brichardi
ENSHGLG00000003822	-	99	84.815	ENSNLEG00000012058	UPF2	99	85.681	Nomascus_leucogenys
ENSHGLG00000003822	-	58	89.062	ENSMEUG00000002180	-	54	89.062	Notamacropus_eugenii
ENSHGLG00000003822	-	80	96.479	ENSOPRG00000006801	-	77	96.479	Ochotona_princeps
ENSHGLG00000003822	-	99	86.367	ENSODEG00000001290	UPF2	99	87.392	Octodon_degus
ENSHGLG00000003822	-	99	72.926	ENSONIG00000017991	UPF2	99	72.848	Oreochromis_niloticus
ENSHGLG00000003822	-	99	86.185	ENSOCUG00000006230	UPF2	100	85.793	Oryctolagus_cuniculus
ENSHGLG00000003822	-	99	71.540	ENSORLG00000017189	UPF2	99	72.088	Oryzias_latipes
ENSHGLG00000003822	-	99	71.618	ENSORLG00020005969	UPF2	99	72.166	Oryzias_latipes_hni
ENSHGLG00000003822	-	99	71.540	ENSORLG00015005713	UPF2	99	72.088	Oryzias_latipes_hsok
ENSHGLG00000003822	-	99	70.024	ENSOMEG00000023420	UPF2	98	70.532	Oryzias_melastigma
ENSHGLG00000003822	-	99	84.961	ENSOGAG00000005796	UPF2	99	85.591	Otolemur_garnettii
ENSHGLG00000003822	-	99	85.299	ENSOARG00000014587	UPF2	99	86.557	Ovis_aries
ENSHGLG00000003822	-	99	81.392	ENSPPAG00000037953	UPF2	100	82.756	Pan_paniscus
ENSHGLG00000003822	-	99	85.276	ENSPPRG00000000690	UPF2	99	86.693	Panthera_pardus
ENSHGLG00000003822	-	99	85.276	ENSPTIG00000008867	UPF2	99	86.693	Panthera_tigris_altaica
ENSHGLG00000003822	-	99	84.894	ENSPTRG00000002291	UPF2	99	85.759	Pan_troglodytes
ENSHGLG00000003822	-	99	84.972	ENSPANG00000023399	UPF2	99	85.838	Papio_anubis
ENSHGLG00000003822	-	99	71.194	ENSPKIG00000025502	UPF2	99	71.819	Paramormyrops_kingsleyae
ENSHGLG00000003822	-	59	77.556	ENSPSIG00000015158	UPF2	95	78.353	Pelodiscus_sinensis
ENSHGLG00000003822	-	99	69.504	ENSPMGG00000005259	UPF2	100	70.236	Periophthalmus_magnuspinnatus
ENSHGLG00000003822	-	92	78.134	ENSPEMG00000015731	Upf2	99	80.175	Peromyscus_maniculatus_bairdii
ENSHGLG00000003822	-	99	82.598	ENSPCIG00000006656	UPF2	100	83.373	Phascolarctos_cinereus
ENSHGLG00000003822	-	99	72.400	ENSPFOG00000017118	UPF2	99	72.166	Poecilia_formosa
ENSHGLG00000003822	-	99	72.400	ENSPLAG00000005094	UPF2	99	72.166	Poecilia_latipinna
ENSHGLG00000003822	-	99	72.400	ENSPMEG00000017009	UPF2	99	72.166	Poecilia_mexicana
ENSHGLG00000003822	-	99	72.214	ENSPREG00000021880	UPF2	100	72.292	Poecilia_reticulata
ENSHGLG00000003822	-	66	87.665	ENSPPYG00000002089	-	99	88.144	Pongo_abelii
ENSHGLG00000003822	-	91	79.779	ENSPCAG00000000684	UPF2	90	80.055	Procavia_capensis
ENSHGLG00000003822	-	99	79.072	ENSPVAG00000017286	UPF2	99	79.937	Pteropus_vampyrus
ENSHGLG00000003822	-	99	72.054	ENSPNYG00000017096	UPF2	100	71.975	Pundamilia_nyererei
ENSHGLG00000003822	-	99	73.513	ENSPNAG00000009357	UPF2	100	73.465	Pygocentrus_nattereri
ENSHGLG00000003822	-	99	78.869	ENSRNOG00000023593	Upf2	99	96.629	Rattus_norvegicus
ENSHGLG00000003822	-	99	83.110	ENSRBIG00000037780	UPF2	100	84.779	Rhinopithecus_bieti
ENSHGLG00000003822	-	99	84.016	ENSRROG00000043547	UPF2	99	85.681	Rhinopithecus_roxellana
ENSHGLG00000003822	-	99	84.634	ENSSBOG00000020012	UPF2	99	86.299	Saimiri_boliviensis_boliviensis
ENSHGLG00000003822	-	99	72.948	ENSSFOG00015023788	upf2	100	72.713	Scleropages_formosus
ENSHGLG00000003822	-	89	73.374	ENSSMAG00000007637	UPF2	100	70.388	Scophthalmus_maximus
ENSHGLG00000003822	-	99	72.557	ENSSDUG00000017244	UPF2	99	72.791	Seriola_dumerili
ENSHGLG00000003822	-	99	71.193	ENSSLDG00000016866	UPF2	100	71.429	Seriola_lalandi_dorsalis
ENSHGLG00000003822	-	99	83.228	ENSSARG00000008615	UPF2	99	84.488	Sorex_araneus
ENSHGLG00000003822	-	94	91.525	ENSSPUG00000014544	UPF2	99	80.048	Sphenodon_punctatus
ENSHGLG00000003822	-	69	87.903	ENSSSCG00000011117	-	99	88.364	Sus_scrofa
ENSHGLG00000003822	-	99	80.915	ENSTGUG00000002163	-	100	81.861	Taeniopygia_guttata
ENSHGLG00000003822	-	99	72.478	ENSTRUG00000007519	UPF2	99	72.400	Takifugu_rubripes
ENSHGLG00000003822	-	99	71.272	ENSTNIG00000004453	UPF2	99	70.882	Tetraodon_nigroviridis
ENSHGLG00000003822	-	92	77.966	ENSTBEG00000012679	UPF2	93	78.831	Tupaia_belangeri
ENSHGLG00000003822	-	99	85.500	ENSTTRG00000016388	UPF2	99	86.446	Tursiops_truncatus
ENSHGLG00000003822	-	87	96.629	ENSUAMG00000023560	UPF2	96	96.629	Ursus_americanus
ENSHGLG00000003822	-	99	85.512	ENSUMAG00000012953	UPF2	95	86.614	Ursus_maritimus
ENSHGLG00000003822	-	82	96.774	ENSVPAG00000006763	UPF2	83	96.774	Vicugna_pacos
ENSHGLG00000003822	-	99	85.276	ENSVVUG00000006166	UPF2	99	86.772	Vulpes_vulpes
ENSHGLG00000003822	-	99	74.571	ENSXETG00000033103	UPF2	91	78.701	Xenopus_tropicalis
ENSHGLG00000003822	-	99	71.831	ENSXCOG00000011604	UPF2	100	71.987	Xiphophorus_couchianus
ENSHGLG00000003822	-	99	72.244	ENSXMAG00000017209	UPF2	99	71.931	Xiphophorus_maculatus