EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000003829 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 2307 bases
Position: chrJH602127.1:10733282-10735588
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000005232	CSD	PF00313.22	1.5e-69	1	5
ENSHGLP00000005232	CSD	PF00313.22	1.5e-69	2	5
ENSHGLP00000005232	CSD	PF00313.22	1.5e-69	3	5
ENSHGLP00000005232	CSD	PF00313.22	1.5e-69	4	5
ENSHGLP00000005232	CSD	PF00313.22	1.5e-69	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000005301	-	2193	-	ENSHGLP00000005232	730 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000003829's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000003829's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000003829	-	98	81.960	ENSHGLG00000010039	-	100	81.960
ENSHGLG00000003829	-	99	74.902	ENSHGLG00000000650	-	99	74.902
ENSHGLG00000003829	-	100	76.184	ENSHGLG00000019549	-	100	76.184
ENSHGLG00000003829	-	99	81.737	ENSHGLG00000008555	-	100	81.737
ENSHGLG00000003829	-	99	79.893	ENSHGLG00000007471	-	98	79.893
ENSHGLG00000003829	-	100	84.316	ENSHGLG00000009620	-	100	84.584

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000003829	-	100	89.309	ENSG00000009307	CSDE1	100	100.000	Homo_sapiens
ENSHGLG00000003829	-	100	69.740	ENSAPOG00000015538	csde1	100	69.740	Acanthochromis_polyacanthus
ENSHGLG00000003829	-	100	88.642	ENSAMEG00000017129	CSDE1	94	88.642	Ailuropoda_melanoleuca
ENSHGLG00000003829	-	90	71.585	ENSACIG00000015175	csde1	99	71.585	Amphilophus_citrinellus
ENSHGLG00000003829	-	100	69.870	ENSAOCG00000011510	csde1	100	69.870	Amphiprion_ocellaris
ENSHGLG00000003829	-	100	69.870	ENSAPEG00000007194	csde1	100	69.870	Amphiprion_percula
ENSHGLG00000003829	-	100	69.961	ENSATEG00000003864	csde1	100	69.961	Anabas_testudineus
ENSHGLG00000003829	-	100	82.529	ENSAPLG00000008797	CSDE1	100	82.529	Anas_platyrhynchos
ENSHGLG00000003829	-	100	79.323	ENSACAG00000003120	CSDE1	100	79.323	Anolis_carolinensis
ENSHGLG00000003829	-	100	89.048	ENSANAG00000024665	CSDE1	95	89.048	Aotus_nancymaae
ENSHGLG00000003829	-	92	68.478	ENSANAG00000028396	-	93	68.478	Aotus_nancymaae
ENSHGLG00000003829	-	100	69.571	ENSACLG00000013296	csde1	100	69.571	Astatotilapia_calliptera
ENSHGLG00000003829	-	100	69.261	ENSAMXG00000007436	csde1	100	69.261	Astyanax_mexicanus
ENSHGLG00000003829	-	100	89.179	ENSBTAG00000000678	CSDE1	100	89.179	Bos_taurus
ENSHGLG00000003829	-	100	89.048	ENSCJAG00000012565	CSDE1	94	89.048	Callithrix_jacchus
ENSHGLG00000003829	-	98	89.096	ENSCAFG00000009618	CSDE1	94	89.096	Canis_familiaris
ENSHGLG00000003829	-	100	89.179	ENSCAFG00020000481	CSDE1	100	89.179	Canis_lupus_dingo
ENSHGLG00000003829	-	100	89.179	ENSCHIG00000017250	CSDE1	100	89.179	Capra_hircus
ENSHGLG00000003829	-	100	89.048	ENSTSYG00000003747	CSDE1	100	89.048	Carlito_syrichta
ENSHGLG00000003829	-	100	73.062	ENSCAPG00000015128	CSDE1	100	73.062	Cavia_aperea
ENSHGLG00000003829	-	100	85.204	ENSCPOG00000040388	CSDE1	100	85.204	Cavia_porcellus
ENSHGLG00000003829	-	100	89.048	ENSCCAG00000036794	CSDE1	100	88.419	Cebus_capucinus
ENSHGLG00000003829	-	95	71.394	ENSCCAG00000033677	-	99	71.394	Cebus_capucinus
ENSHGLG00000003829	-	96	68.919	ENSCCAG00000030878	-	91	68.919	Cebus_capucinus
ENSHGLG00000003829	-	100	89.309	ENSCATG00000036962	CSDE1	98	88.836	Cercocebus_atys
ENSHGLG00000003829	-	100	89.570	ENSCLAG00000006618	CSDE1	100	89.570	Chinchilla_lanigera
ENSHGLG00000003829	-	100	85.840	ENSCSAG00000001658	CSDE1	95	85.840	Chlorocebus_sabaeus
ENSHGLG00000003829	-	100	84.199	ENSCHOG00000000918	CSDE1	89	84.199	Choloepus_hoffmanni
ENSHGLG00000003829	-	100	82.920	ENSCPBG00000016547	CSDE1	100	82.920	Chrysemys_picta_bellii
ENSHGLG00000003829	-	97	38.725	ENSCING00000014465	-	95	38.725	Ciona_intestinalis
ENSHGLG00000003829	-	95	38.999	ENSCSAVG00000008100	-	98	38.999	Ciona_savignyi
ENSHGLG00000003829	-	89	86.517	ENSCANG00000031069	-	94	86.517	Colobus_angolensis_palliatus
ENSHGLG00000003829	-	100	89.309	ENSCANG00000035096	CSDE1	98	88.836	Colobus_angolensis_palliatus
ENSHGLG00000003829	-	100	76.455	ENSCGRG00001014011	-	100	76.455	Cricetulus_griseus_chok1gshd
ENSHGLG00000003829	-	100	89.179	ENSCGRG00001016833	-	100	89.179	Cricetulus_griseus_chok1gshd
ENSHGLG00000003829	-	96	88.196	ENSCGRG00000002225	-	100	88.196	Cricetulus_griseus_crigri
ENSHGLG00000003829	-	100	85.778	ENSCGRG00000005831	-	100	85.778	Cricetulus_griseus_crigri
ENSHGLG00000003829	-	100	69.311	ENSCSEG00000002620	csde1	100	69.311	Cynoglossus_semilaevis
ENSHGLG00000003829	-	100	68.701	ENSCVAG00000001344	csde1	100	68.701	Cyprinodon_variegatus
ENSHGLG00000003829	-	100	67.835	ENSDARG00000074758	csde1	99	70.588	Danio_rerio
ENSHGLG00000003829	-	59	67.364	ENSDNOG00000034464	-	100	67.364	Dasypus_novemcinctus
ENSHGLG00000003829	-	100	88.932	ENSDNOG00000010287	-	93	88.932	Dasypus_novemcinctus
ENSHGLG00000003829	-	99	87.725	ENSDORG00000011609	Csde1	100	87.725	Dipodomys_ordii
ENSHGLG00000003829	-	94	45.492	FBgn0263352	Unr	83	39.405	Drosophila_melanogaster
ENSHGLG00000003829	-	92	94.815	ENSETEG00000002491	-	74	94.815	Echinops_telfairi
ENSHGLG00000003829	-	90	79.107	ENSETEG00000006280	-	100	79.107	Echinops_telfairi
ENSHGLG00000003829	-	99	70.118	ENSETEG00000013678	-	99	70.118	Echinops_telfairi
ENSHGLG00000003829	-	78	62.625	ENSETEG00000007109	-	99	62.625	Echinops_telfairi
ENSHGLG00000003829	-	99	49.015	ENSEBUG00000008647	csde1	99	47.494	Eptatretus_burgeri
ENSHGLG00000003829	-	100	89.700	ENSEASG00005006284	CSDE1	100	86.216	Equus_asinus_asinus
ENSHGLG00000003829	-	100	89.700	ENSECAG00000020885	CSDE1	99	89.045	Equus_caballus
ENSHGLG00000003829	-	92	88.715	ENSEEUG00000006286	CSDE1	68	88.715	Erinaceus_europaeus
ENSHGLG00000003829	-	100	68.889	ENSELUG00000015507	csde1	100	68.889	Esox_lucius
ENSHGLG00000003829	-	100	89.439	ENSFCAG00000029266	CSDE1	100	89.439	Felis_catus
ENSHGLG00000003829	-	100	79.198	ENSFALG00000003407	CSDE1	100	79.198	Ficedula_albicollis
ENSHGLG00000003829	-	99	88.623	ENSFDAG00000007882	CSDE1	100	88.623	Fukomys_damarensis
ENSHGLG00000003829	-	98	68.966	ENSFHEG00000010799	csde1	99	68.966	Fundulus_heteroclitus
ENSHGLG00000003829	-	99	67.127	ENSGMOG00000012731	csde1	100	67.127	Gadus_morhua
ENSHGLG00000003829	-	98	79.028	ENSGALG00000002139	CSDE1	98	79.028	Gallus_gallus
ENSHGLG00000003829	-	92	67.683	ENSGAFG00000005241	csde1	95	67.683	Gambusia_affinis
ENSHGLG00000003829	-	99	67.544	ENSGACG00000004544	csde1	100	67.544	Gasterosteus_aculeatus
ENSHGLG00000003829	-	100	82.529	ENSGAGG00000017685	CSDE1	100	79.323	Gopherus_agassizii
ENSHGLG00000003829	-	100	89.309	ENSGGOG00000002164	CSDE1	100	89.309	Gorilla_gorilla
ENSHGLG00000003829	-	100	69.571	ENSHBUG00000020315	csde1	100	69.571	Haplochromis_burtoni
ENSHGLG00000003829	-	100	76.090	ENSHGLG00100001846	-	100	76.090	Heterocephalus_glaber_male
ENSHGLG00000003829	-	99	78.266	ENSHGLG00100002245	-	99	78.266	Heterocephalus_glaber_male
ENSHGLG00000003829	-	96	80.320	ENSHGLG00100004833	-	100	80.320	Heterocephalus_glaber_male
ENSHGLG00000003829	-	100	92.603	ENSHGLG00100012072	-	100	92.603	Heterocephalus_glaber_male
ENSHGLG00000003829	-	100	90.091	ENSHGLG00100019438	-	100	90.091	Heterocephalus_glaber_male
ENSHGLG00000003829	-	98	81.737	ENSHGLG00100006910	-	100	81.737	Heterocephalus_glaber_male
ENSHGLG00000003829	-	93	78.741	ENSHGLG00100004195	-	100	78.741	Heterocephalus_glaber_male
ENSHGLG00000003829	-	99	77.896	ENSHGLG00100007287	-	98	77.896	Heterocephalus_glaber_male
ENSHGLG00000003829	-	100	68.612	ENSHCOG00000004158	csde1	100	68.612	Hippocampus_comes
ENSHGLG00000003829	-	100	69.520	ENSIPUG00000000355	csde1	100	69.520	Ictalurus_punctatus
ENSHGLG00000003829	-	100	74.323	ENSSTOG00000030994	-	100	74.323	Ictidomys_tridecemlineatus
ENSHGLG00000003829	-	90	75.054	ENSSTOG00000032722	-	98	75.054	Ictidomys_tridecemlineatus
ENSHGLG00000003829	-	99	87.575	ENSJJAG00000019571	Csde1	100	87.575	Jaculus_jaculus
ENSHGLG00000003829	-	100	66.874	ENSKMAG00000005685	csde1	100	66.543	Kryptolebias_marmoratus
ENSHGLG00000003829	-	100	69.870	ENSLBEG00000014770	csde1	100	69.870	Labrus_bergylta
ENSHGLG00000003829	-	100	68.983	ENSLACG00000018452	CSDE1	94	68.983	Latimeria_chalumnae
ENSHGLG00000003829	-	100	69.762	ENSLOCG00000010413	csde1	94	69.762	Lepisosteus_oculatus
ENSHGLG00000003829	-	100	88.396	ENSLAFG00000007150	CSDE1	96	88.396	Loxodonta_africana
ENSHGLG00000003829	-	100	89.309	ENSMFAG00000003674	CSDE1	100	89.309	Macaca_fascicularis
ENSHGLG00000003829	-	100	89.309	ENSMMUG00000001974	CSDE1	100	89.309	Macaca_mulatta
ENSHGLG00000003829	-	100	89.309	ENSMNEG00000045247	CSDE1	98	88.836	Macaca_nemestrina
ENSHGLG00000003829	-	100	89.048	ENSMLEG00000038673	CSDE1	94	89.048	Mandrillus_leucophaeus
ENSHGLG00000003829	-	100	70.390	ENSMAMG00000008821	csde1	100	70.390	Mastacembelus_armatus
ENSHGLG00000003829	-	100	69.571	ENSMZEG00005021675	csde1	100	69.571	Maylandia_zebra
ENSHGLG00000003829	-	100	82.292	ENSMGAG00000016381	CSDE1	100	82.292	Meleagris_gallopavo
ENSHGLG00000003829	-	99	87.874	ENSMAUG00000014031	Csde1	100	87.874	Mesocricetus_auratus
ENSHGLG00000003829	-	100	89.179	ENSMICG00000002050	CSDE1	99	89.062	Microcebus_murinus
ENSHGLG00000003829	-	100	89.179	ENSMOCG00000018960	Csde1	100	89.179	Microtus_ochrogaster
ENSHGLG00000003829	-	100	69.740	ENSMMOG00000015075	csde1	100	69.740	Mola_mola
ENSHGLG00000003829	-	100	85.436	ENSMODG00000004685	CSDE1	100	82.832	Monodelphis_domestica
ENSHGLG00000003829	-	100	70.000	ENSMALG00000007132	csde1	100	70.000	Monopterus_albus
ENSHGLG00000003829	-	100	88.918	MGP_CAROLIEiJ_G0025444	Csde1	100	88.918	Mus_caroli
ENSHGLG00000003829	-	100	89.048	ENSMUSG00000068823	Csde1	100	89.048	Mus_musculus
ENSHGLG00000003829	-	100	89.309	MGP_PahariEiJ_G0026888	Csde1	100	89.309	Mus_pahari
ENSHGLG00000003829	-	100	89.309	MGP_SPRETEiJ_G0026394	Csde1	100	89.309	Mus_spretus
ENSHGLG00000003829	-	98	85.824	ENSMPUG00000005753	CSDE1	99	85.824	Mustela_putorius_furo
ENSHGLG00000003829	-	100	88.527	ENSMLUG00000005681	CSDE1	94	88.527	Myotis_lucifugus
ENSHGLG00000003829	-	99	87.874	ENSNGAG00000021929	Csde1	100	87.874	Nannospalax_galili
ENSHGLG00000003829	-	96	64.155	ENSNGAG00000012599	-	100	64.155	Nannospalax_galili
ENSHGLG00000003829	-	100	69.571	ENSNBRG00000020808	csde1	100	69.571	Neolamprologus_brichardi
ENSHGLG00000003829	-	100	89.179	ENSNLEG00000004842	CSDE1	97	89.179	Nomascus_leucogenys
ENSHGLG00000003829	-	98	82.713	ENSMEUG00000002677	CSDE1	100	82.713	Notamacropus_eugenii
ENSHGLG00000003829	-	98	95.146	ENSOPRG00000005002	CSDE1	76	95.146	Ochotona_princeps
ENSHGLG00000003829	-	99	88.024	ENSODEG00000007383	-	100	88.024	Octodon_degus
ENSHGLG00000003829	-	96	66.125	ENSODEG00000005979	-	98	66.125	Octodon_degus
ENSHGLG00000003829	-	100	65.483	ENSONIG00000009309	csde1	100	65.483	Oreochromis_niloticus
ENSHGLG00000003829	-	100	69.260	ENSOANG00000003346	-	100	69.260	Ornithorhynchus_anatinus
ENSHGLG00000003829	-	100	88.657	ENSOCUG00000016438	CSDE1	94	88.657	Oryctolagus_cuniculus
ENSHGLG00000003829	-	100	69.051	ENSORLG00000000707	csde1	100	69.051	Oryzias_latipes
ENSHGLG00000003829	-	100	66.541	ENSORLG00020005148	csde1	100	64.994	Oryzias_latipes_hni
ENSHGLG00000003829	-	100	69.051	ENSORLG00015019415	csde1	100	69.051	Oryzias_latipes_hsok
ENSHGLG00000003829	-	100	70.130	ENSOMEG00000015656	csde1	100	70.130	Oryzias_melastigma
ENSHGLG00000003829	-	100	89.570	ENSOGAG00000012127	CSDE1	94	89.570	Otolemur_garnettii
ENSHGLG00000003829	-	100	89.309	ENSOARG00000020034	CSDE1	94	89.309	Ovis_aries
ENSHGLG00000003829	-	100	89.309	ENSPPAG00000025861	CSDE1	100	89.309	Pan_paniscus
ENSHGLG00000003829	-	100	89.439	ENSPPRG00000006747	CSDE1	94	89.439	Panthera_pardus
ENSHGLG00000003829	-	100	89.439	ENSPTIG00000015468	CSDE1	100	85.965	Panthera_tigris_altaica
ENSHGLG00000003829	-	100	89.309	ENSPTRG00000033721	CSDE1	97	89.309	Pan_troglodytes
ENSHGLG00000003829	-	100	89.309	ENSPANG00000018873	CSDE1	100	89.309	Papio_anubis
ENSHGLG00000003829	-	100	69.831	ENSPKIG00000009459	csde1	100	69.831	Paramormyrops_kingsleyae
ENSHGLG00000003829	-	96	81.195	ENSPSIG00000003823	CSDE1	96	81.195	Pelodiscus_sinensis
ENSHGLG00000003829	-	100	69.481	ENSPMGG00000000772	csde1	100	69.481	Periophthalmus_magnuspinnatus
ENSHGLG00000003829	-	99	87.874	ENSPEMG00000020357	-	100	87.874	Peromyscus_maniculatus_bairdii
ENSHGLG00000003829	-	100	82.957	ENSPCIG00000022587	CSDE1	100	82.957	Phascolarctos_cinereus
ENSHGLG00000003829	-	99	66.460	ENSPFOG00000012664	csde1	100	66.925	Poecilia_formosa
ENSHGLG00000003829	-	97	62.519	ENSPLAG00000017680	csde1	93	62.519	Poecilia_latipinna
ENSHGLG00000003829	-	97	62.673	ENSPMEG00000005094	csde1	95	62.673	Poecilia_mexicana
ENSHGLG00000003829	-	100	66.002	ENSPREG00000011631	csde1	100	64.140	Poecilia_reticulata
ENSHGLG00000003829	-	100	86.216	ENSPPYG00000000996	CSDE1	100	86.216	Pongo_abelii
ENSHGLG00000003829	-	100	84.746	ENSPCAG00000014368	CSDE1	94	84.746	Procavia_capensis
ENSHGLG00000003829	-	100	89.439	ENSPCOG00000017893	CSDE1	100	89.439	Propithecus_coquereli
ENSHGLG00000003829	-	89	75.746	ENSPCOG00000008223	-	91	75.746	Propithecus_coquereli
ENSHGLG00000003829	-	100	83.572	ENSPVAG00000008225	CSDE1	95	83.572	Pteropus_vampyrus
ENSHGLG00000003829	-	100	69.571	ENSPNYG00000013745	csde1	100	69.571	Pundamilia_nyererei
ENSHGLG00000003829	-	100	69.740	ENSPNAG00000001958	csde1	100	69.740	Pygocentrus_nattereri
ENSHGLG00000003829	-	100	86.090	ENSRNOG00000061058	Csde1	100	86.090	Rattus_norvegicus
ENSHGLG00000003829	-	100	83.594	ENSRBIG00000038966	-	94	83.594	Rhinopithecus_bieti
ENSHGLG00000003829	-	100	87.402	ENSRBIG00000038088	-	100	87.402	Rhinopithecus_bieti
ENSHGLG00000003829	-	100	89.309	ENSRROG00000043101	CSDE1	98	88.626	Rhinopithecus_roxellana
ENSHGLG00000003829	-	100	89.048	ENSSBOG00000035592	CSDE1	95	89.048	Saimiri_boliviensis_boliviensis
ENSHGLG00000003829	-	100	86.310	ENSSHAG00000009831	CSDE1	100	86.310	Sarcophilus_harrisii
ENSHGLG00000003829	-	100	69.571	ENSSFOG00015007498	csde1	100	69.571	Scleropages_formosus
ENSHGLG00000003829	-	100	70.130	ENSSMAG00000007203	csde1	100	70.130	Scophthalmus_maximus
ENSHGLG00000003829	-	100	69.740	ENSSDUG00000015380	csde1	100	69.740	Seriola_dumerili
ENSHGLG00000003829	-	100	69.740	ENSSLDG00000008819	csde1	100	69.740	Seriola_lalandi_dorsalis
ENSHGLG00000003829	-	100	88.396	ENSSARG00000000738	CSDE1	94	88.396	Sorex_araneus
ENSHGLG00000003829	-	100	82.660	ENSSPUG00000008714	CSDE1	100	82.660	Sphenodon_punctatus
ENSHGLG00000003829	-	100	70.130	ENSSPAG00000000716	csde1	100	70.130	Stegastes_partitus
ENSHGLG00000003829	-	100	89.179	ENSSSCG00000006752	CSDE1	100	89.179	Sus_scrofa
ENSHGLG00000003829	-	100	78.473	ENSTGUG00000000972	CSDE1	100	78.473	Taeniopygia_guttata
ENSHGLG00000003829	-	100	66.797	ENSTRUG00000007996	csde1	100	66.797	Takifugu_rubripes
ENSHGLG00000003829	-	89	67.050	ENSTNIG00000010878	csde1	100	67.050	Tetraodon_nigroviridis
ENSHGLG00000003829	-	66	88.957	ENSTBEG00000011880	-	62	88.957	Tupaia_belangeri
ENSHGLG00000003829	-	100	88.396	ENSTTRG00000015583	CSDE1	94	88.396	Tursiops_truncatus
ENSHGLG00000003829	-	89	84.541	ENSUAMG00000024289	-	99	84.541	Ursus_americanus
ENSHGLG00000003829	-	88	88.424	ENSUAMG00000021779	-	100	88.424	Ursus_americanus
ENSHGLG00000003829	-	100	82.529	ENSUMAG00000009720	-	97	82.529	Ursus_maritimus
ENSHGLG00000003829	-	85	88.836	ENSUMAG00000011714	-	99	88.836	Ursus_maritimus
ENSHGLG00000003829	-	100	90.654	ENSVPAG00000000749	CSDE1	79	90.654	Vicugna_pacos
ENSHGLG00000003829	-	93	84.357	ENSVVUG00000009890	CSDE1	94	84.357	Vulpes_vulpes
ENSHGLG00000003829	-	100	74.032	ENSXETG00000021448	csde1	100	74.032	Xenopus_tropicalis
ENSHGLG00000003829	-	92	59.708	ENSXCOG00000000035	csde1	99	59.708	Xiphophorus_couchianus
ENSHGLG00000003829	-	98	69.496	ENSXMAG00000009080	csde1	98	69.496	Xiphophorus_maculatus