EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000003838 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 1558 bases
Position: chrJH602104.1:1554216-1555773
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000005246	PRP4	PF08799.11	1.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000005315	-	1404	-	ENSHGLP00000005246	467 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000003838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000003838's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000003838	-	100	80.998	ENSHGLG00000015191	PRPF4	100	80.998
ENSHGLG00000003838	-	100	68.085	ENSHGLG00000016628	-	100	69.052
ENSHGLG00000003838	-	57	30.579	ENSHGLG00000014556	POC1B	64	30.579

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000003838	-	100	80.230	ENSG00000136875	PRPF4	100	80.230	Homo_sapiens
ENSHGLG00000003838	-	90	61.506	ENSAPOG00000014132	prpf4	98	61.506	Acanthochromis_polyacanthus
ENSHGLG00000003838	-	100	80.422	ENSAMEG00000013048	PRPF4	98	80.422	Ailuropoda_melanoleuca
ENSHGLG00000003838	-	96	62.897	ENSACIG00000005579	prpf4	99	62.897	Amphilophus_citrinellus
ENSHGLG00000003838	-	96	61.782	ENSAOCG00000005457	prpf4	99	61.782	Amphiprion_ocellaris
ENSHGLG00000003838	-	96	61.584	ENSAPEG00000000776	prpf4	99	61.584	Amphiprion_percula
ENSHGLG00000003838	-	96	61.905	ENSATEG00000023013	prpf4	99	61.905	Anabas_testudineus
ENSHGLG00000003838	-	100	71.977	ENSAPLG00000006534	PRPF4	97	71.977	Anas_platyrhynchos
ENSHGLG00000003838	-	100	71.893	ENSACAG00000015110	PRPF4	100	71.893	Anolis_carolinensis
ENSHGLG00000003838	-	100	80.614	ENSANAG00000022464	PRPF4	96	80.614	Aotus_nancymaae
ENSHGLG00000003838	-	96	62.500	ENSACLG00000019031	prpf4	99	62.500	Astatotilapia_calliptera
ENSHGLG00000003838	-	97	58.717	ENSAMXG00000006756	prpf4	99	58.918	Astyanax_mexicanus
ENSHGLG00000003838	-	100	79.655	ENSBTAG00000004571	PRPF4	100	79.655	Bos_taurus
ENSHGLG00000003838	-	81	38.350	WBGene00007972	prp-4	89	36.697	Caenorhabditis_elegans
ENSHGLG00000003838	-	100	80.460	ENSCJAG00000017856	PRPF4	100	80.460	Callithrix_jacchus
ENSHGLG00000003838	-	100	80.422	ENSCAFG00000003224	PRPF4	97	80.422	Canis_familiaris
ENSHGLG00000003838	-	100	80.422	ENSCAFG00020022637	PRPF4	100	80.422	Canis_lupus_dingo
ENSHGLG00000003838	-	100	80.268	ENSCHIG00000024648	-	100	80.268	Capra_hircus
ENSHGLG00000003838	-	100	80.422	ENSTSYG00000010366	PRPF4	100	80.422	Carlito_syrichta
ENSHGLG00000003838	-	77	70.460	ENSCAPG00000008935	PRPF4	97	70.460	Cavia_aperea
ENSHGLG00000003838	-	100	80.998	ENSCPOG00000010747	-	100	80.998	Cavia_porcellus
ENSHGLG00000003838	-	100	75.816	ENSCPOG00000014729	-	100	75.816	Cavia_porcellus
ENSHGLG00000003838	-	100	80.614	ENSCCAG00000028990	PRPF4	100	80.614	Cebus_capucinus
ENSHGLG00000003838	-	100	80.230	ENSCATG00000021552	PRPF4	100	80.230	Cercocebus_atys
ENSHGLG00000003838	-	100	80.806	ENSCLAG00000013448	PRPF4	100	80.806	Chinchilla_lanigera
ENSHGLG00000003838	-	85	74.779	ENSCHOG00000007233	PRPF4	100	74.779	Choloepus_hoffmanni
ENSHGLG00000003838	-	99	72.816	ENSCPBG00000019136	PRPF4	78	70.741	Chrysemys_picta_bellii
ENSHGLG00000003838	-	95	49.206	ENSCING00000001299	-	97	49.206	Ciona_intestinalis
ENSHGLG00000003838	-	94	48.898	ENSCSAVG00000009178	-	98	49.453	Ciona_savignyi
ENSHGLG00000003838	-	100	80.422	ENSCANG00000003246	PRPF4	100	80.422	Colobus_angolensis_palliatus
ENSHGLG00000003838	-	100	80.473	ENSCGRG00001016992	Prpf4	100	80.473	Cricetulus_griseus_chok1gshd
ENSHGLG00000003838	-	100	80.473	ENSCGRG00000017560	Prpf4	100	80.473	Cricetulus_griseus_crigri
ENSHGLG00000003838	-	97	60.990	ENSCSEG00000020451	prpf4	99	60.990	Cynoglossus_semilaevis
ENSHGLG00000003838	-	97	64.554	ENSDARG00000067639	prpf4	99	64.554	Danio_rerio
ENSHGLG00000003838	-	100	80.077	ENSDNOG00000013203	PRPF4	100	80.077	Dasypus_novemcinctus
ENSHGLG00000003838	-	100	80.230	ENSDORG00000026275	Prpf4	100	80.230	Dipodomys_ordii
ENSHGLG00000003838	-	99	42.000	FBgn0036733	U4-U6-60K	99	39.781	Drosophila_melanogaster
ENSHGLG00000003838	-	100	78.776	ENSETEG00000020389	PRPF4	100	78.776	Echinops_telfairi
ENSHGLG00000003838	-	81	58.065	ENSEBUG00000015229	prpf4	86	58.525	Eptatretus_burgeri
ENSHGLG00000003838	-	100	80.614	ENSEASG00005022678	PRPF4	100	80.614	Equus_asinus_asinus
ENSHGLG00000003838	-	100	80.614	ENSECAG00000007072	PRPF4	100	80.614	Equus_caballus
ENSHGLG00000003838	-	72	79.741	ENSEEUG00000007480	PRPF4	86	79.741	Erinaceus_europaeus
ENSHGLG00000003838	-	97	64.950	ENSELUG00000007510	prpf4	99	64.950	Esox_lucius
ENSHGLG00000003838	-	100	80.460	ENSFCAG00000005514	PRPF4	100	80.460	Felis_catus
ENSHGLG00000003838	-	84	68.386	ENSFALG00000005423	PRPF4	86	68.386	Ficedula_albicollis
ENSHGLG00000003838	-	100	80.806	ENSFDAG00000005839	PRPF4	100	80.806	Fukomys_damarensis
ENSHGLG00000003838	-	96	61.905	ENSFHEG00000001300	prpf4	99	61.905	Fundulus_heteroclitus
ENSHGLG00000003838	-	98	72.603	ENSGALG00000008857	PRPF4	95	72.603	Gallus_gallus
ENSHGLG00000003838	-	64	58.824	ENSGAFG00000012164	prpf4	70	58.824	Gambusia_affinis
ENSHGLG00000003838	-	96	56.151	ENSGACG00000015476	prpf4	99	55.754	Gasterosteus_aculeatus
ENSHGLG00000003838	-	99	72.621	ENSGAGG00000025029	PRPF4	95	72.621	Gopherus_agassizii
ENSHGLG00000003838	-	100	80.230	ENSGGOG00000006943	PRPF4	100	80.230	Gorilla_gorilla
ENSHGLG00000003838	-	96	62.302	ENSHBUG00000000562	prpf4	99	62.302	Haplochromis_burtoni
ENSHGLG00000003838	-	100	100.000	ENSHGLG00100005571	-	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000003838	-	97	63.762	ENSIPUG00000017956	PRPF4	99	63.762	Ictalurus_punctatus
ENSHGLG00000003838	-	100	80.038	ENSSTOG00000027833	PRPF4	100	80.038	Ictidomys_tridecemlineatus
ENSHGLG00000003838	-	100	80.897	ENSJJAG00000008838	Prpf4	100	80.897	Jaculus_jaculus
ENSHGLG00000003838	-	96	61.310	ENSKMAG00000013236	prpf4	99	61.310	Kryptolebias_marmoratus
ENSHGLG00000003838	-	96	60.159	ENSLBEG00000020611	prpf4	99	60.956	Labrus_bergylta
ENSHGLG00000003838	-	99	65.896	ENSLACG00000016317	PRPF4	99	65.896	Latimeria_chalumnae
ENSHGLG00000003838	-	97	65.545	ENSLOCG00000000581	prpf4	99	65.545	Lepisosteus_oculatus
ENSHGLG00000003838	-	100	79.693	ENSLAFG00000018225	PRPF4	100	79.693	Loxodonta_africana
ENSHGLG00000003838	-	100	80.230	ENSMFAG00000039397	PRPF4	100	80.230	Macaca_fascicularis
ENSHGLG00000003838	-	100	80.230	ENSMMUG00000005844	PRPF4	100	80.230	Macaca_mulatta
ENSHGLG00000003838	-	100	71.124	ENSMNEG00000033737	PRPF4	100	71.124	Macaca_nemestrina
ENSHGLG00000003838	-	100	80.230	ENSMLEG00000040284	PRPF4	100	80.230	Mandrillus_leucophaeus
ENSHGLG00000003838	-	97	61.341	ENSMAMG00000020141	prpf4	99	61.341	Mastacembelus_armatus
ENSHGLG00000003838	-	96	62.500	ENSMZEG00005023205	prpf4	99	62.500	Maylandia_zebra
ENSHGLG00000003838	-	99	71.154	ENSMGAG00000001796	PRPF4	97	71.154	Meleagris_gallopavo
ENSHGLG00000003838	-	100	79.846	ENSMAUG00000018022	Prpf4	100	79.846	Mesocricetus_auratus
ENSHGLG00000003838	-	100	80.038	ENSMICG00000015022	PRPF4	100	79.885	Microcebus_murinus
ENSHGLG00000003838	-	100	79.655	ENSMOCG00000018273	Prpf4	100	79.655	Microtus_ochrogaster
ENSHGLG00000003838	-	97	60.000	ENSMMOG00000021177	prpf4	99	60.792	Mola_mola
ENSHGLG00000003838	-	100	76.482	ENSMODG00000004444	-	100	76.482	Monodelphis_domestica
ENSHGLG00000003838	-	100	76.291	ENSMODG00000025096	-	97	76.291	Monodelphis_domestica
ENSHGLG00000003838	-	96	61.706	ENSMALG00000013624	prpf4	99	61.706	Monopterus_albus
ENSHGLG00000003838	-	100	80.038	MGP_CAROLIEiJ_G0026078	Prpf4	100	80.038	Mus_caroli
ENSHGLG00000003838	-	100	80.038	ENSMUSG00000066148	Prpf4	100	80.038	Mus_musculus
ENSHGLG00000003838	-	100	80.038	MGP_PahariEiJ_G0028413	Prpf4	100	80.038	Mus_pahari
ENSHGLG00000003838	-	100	80.038	MGP_SPRETEiJ_G0027042	Prpf4	100	80.038	Mus_spretus
ENSHGLG00000003838	-	100	80.422	ENSMPUG00000007883	PRPF4	100	80.422	Mustela_putorius_furo
ENSHGLG00000003838	-	100	80.422	ENSMLUG00000015309	-	97	80.422	Myotis_lucifugus
ENSHGLG00000003838	-	100	78.695	ENSMLUG00000008626	-	97	78.695	Myotis_lucifugus
ENSHGLG00000003838	-	100	75.240	ENSNGAG00000000468	Prpf4	100	75.240	Nannospalax_galili
ENSHGLG00000003838	-	96	62.698	ENSNBRG00000007972	prpf4	99	62.698	Neolamprologus_brichardi
ENSHGLG00000003838	-	100	80.614	ENSNLEG00000016647	PRPF4	100	80.614	Nomascus_leucogenys
ENSHGLG00000003838	-	98	76.459	ENSMEUG00000013256	PRPF4	100	76.459	Notamacropus_eugenii
ENSHGLG00000003838	-	100	79.693	ENSOPRG00000005302	PRPF4	100	79.693	Ochotona_princeps
ENSHGLG00000003838	-	100	80.998	ENSODEG00000018147	PRPF4	100	80.998	Octodon_degus
ENSHGLG00000003838	-	99	61.185	ENSONIG00000012671	prpf4	99	62.500	Oreochromis_niloticus
ENSHGLG00000003838	-	100	80.422	ENSOCUG00000005046	PRPF4	100	80.422	Oryctolagus_cuniculus
ENSHGLG00000003838	-	96	60.200	ENSORLG00000019641	prpf4	98	60.200	Oryzias_latipes
ENSHGLG00000003838	-	96	60.200	ENSORLG00020019438	prpf4	98	60.200	Oryzias_latipes_hni
ENSHGLG00000003838	-	96	59.960	ENSOMEG00000020941	prpf4	99	59.960	Oryzias_melastigma
ENSHGLG00000003838	-	100	76.008	ENSOGAG00000007802	PRPF4	98	76.008	Otolemur_garnettii
ENSHGLG00000003838	-	100	80.422	ENSOARG00000006319	PRPF4	97	80.422	Ovis_aries
ENSHGLG00000003838	-	100	80.230	ENSPPAG00000041797	PRPF4	100	80.230	Pan_paniscus
ENSHGLG00000003838	-	100	80.614	ENSPPRG00000014360	PRPF4	100	80.614	Panthera_pardus
ENSHGLG00000003838	-	100	80.614	ENSPTIG00000009574	PRPF4	100	80.614	Panthera_tigris_altaica
ENSHGLG00000003838	-	100	80.230	ENSPTRG00000021274	PRPF4	100	80.077	Pan_troglodytes
ENSHGLG00000003838	-	100	80.230	ENSPANG00000025776	PRPF4	96	80.230	Papio_anubis
ENSHGLG00000003838	-	97	64.554	ENSPKIG00000017259	prpf4	99	64.554	Paramormyrops_kingsleyae
ENSHGLG00000003838	-	100	71.209	ENSPSIG00000010713	PRPF4	92	71.209	Pelodiscus_sinensis
ENSHGLG00000003838	-	99	45.083	ENSPMGG00000000997	prpf4	99	45.826	Periophthalmus_magnuspinnatus
ENSHGLG00000003838	-	100	80.230	ENSPEMG00000024115	Prpf4	100	80.230	Peromyscus_maniculatus_bairdii
ENSHGLG00000003838	-	98	76.505	ENSPCIG00000003821	PRPF4	100	76.505	Phascolarctos_cinereus
ENSHGLG00000003838	-	96	56.016	ENSPFOG00000013524	prpf4	98	59.938	Poecilia_formosa
ENSHGLG00000003838	-	61	59.021	ENSPLAG00000011620	prpf4	96	59.317	Poecilia_latipinna
ENSHGLG00000003838	-	62	61.145	ENSPMEG00000006813	prpf4	98	61.145	Poecilia_mexicana
ENSHGLG00000003838	-	98	79.922	ENSPCAG00000002561	PRPF4	99	79.922	Procavia_capensis
ENSHGLG00000003838	-	100	80.422	ENSPCOG00000011975	PRPF4	100	80.422	Propithecus_coquereli
ENSHGLG00000003838	-	100	77.586	ENSPVAG00000004708	PRPF4	100	77.586	Pteropus_vampyrus
ENSHGLG00000003838	-	96	62.500	ENSPNYG00000008013	prpf4	99	62.500	Pundamilia_nyererei
ENSHGLG00000003838	-	97	64.158	ENSPNAG00000000697	prpf4	99	64.158	Pygocentrus_nattereri
ENSHGLG00000003838	-	100	80.230	ENSRNOG00000014777	Prpf4	100	80.230	Rattus_norvegicus
ENSHGLG00000003838	-	100	80.422	ENSRBIG00000040221	PRPF4	100	80.422	Rhinopithecus_bieti
ENSHGLG00000003838	-	100	80.422	ENSRROG00000040240	PRPF4	100	80.422	Rhinopithecus_roxellana
ENSHGLG00000003838	-	100	76.673	ENSSHAG00000017658	PRPF4	100	76.673	Sarcophilus_harrisii
ENSHGLG00000003838	-	97	66.139	ENSSFOG00015008963	prpf4	99	66.139	Scleropages_formosus
ENSHGLG00000003838	-	96	60.714	ENSSMAG00000008889	prpf4	99	60.714	Scophthalmus_maximus
ENSHGLG00000003838	-	93	58.800	ENSSDUG00000022083	prpf4	97	59.000	Seriola_dumerili
ENSHGLG00000003838	-	93	58.765	ENSSLDG00000008115	prpf4	98	58.964	Seriola_lalandi_dorsalis
ENSHGLG00000003838	-	100	72.361	ENSSPUG00000015582	PRPF4	100	72.361	Sphenodon_punctatus
ENSHGLG00000003838	-	96	57.199	ENSSPAG00000011286	prpf4	99	57.199	Stegastes_partitus
ENSHGLG00000003838	-	100	80.614	ENSSSCG00000024648	PRPF4	100	80.614	Sus_scrofa
ENSHGLG00000003838	-	96	71.400	ENSTGUG00000002623	PRPF4	100	72.393	Taeniopygia_guttata
ENSHGLG00000003838	-	97	59.881	ENSTRUG00000008853	prpf4	99	60.672	Takifugu_rubripes
ENSHGLG00000003838	-	97	59.208	ENSTNIG00000013250	prpf4	99	60.000	Tetraodon_nigroviridis
ENSHGLG00000003838	-	100	76.628	ENSTBEG00000000821	PRPF4	100	76.628	Tupaia_belangeri
ENSHGLG00000003838	-	74	89.535	ENSTTRG00000003246	PRPF4	85	89.535	Tursiops_truncatus
ENSHGLG00000003838	-	63	79.641	ENSUAMG00000018288	PRPF4	90	79.641	Ursus_americanus
ENSHGLG00000003838	-	100	79.846	ENSUMAG00000019375	PRPF4	100	79.846	Ursus_maritimus
ENSHGLG00000003838	-	100	80.268	ENSVPAG00000005281	PRPF4	100	80.268	Vicugna_pacos
ENSHGLG00000003838	-	100	79.810	ENSVVUG00000002476	PRPF4	100	79.810	Vulpes_vulpes
ENSHGLG00000003838	-	80	57.143	ENSXCOG00000006101	prpf4	93	57.143	Xiphophorus_couchianus
ENSHGLG00000003838	-	96	58.691	ENSXMAG00000002750	prpf4	98	58.691	Xiphophorus_maculatus