EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000003950 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 2002 bases
Position: chrJH602070.1:11388659-11390660
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000005396	SRP72	PF08492.12	3.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000005466	-	1644	-	ENSHGLP00000005396	547 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000003950's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000003950's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000003950	-	97	90.830	ENSHGLG00000005029	-	86	90.830
ENSHGLG00000003950	-	97	94.760	ENSHGLG00000009791	SRP72	86	94.760
ENSHGLG00000003950	-	97	71.304	ENSHGLG00000018597	-	86	71.304
ENSHGLG00000003950	-	53	67.683	ENSHGLG00000003496	-	97	67.988
ENSHGLG00000003950	-	97	69.064	ENSHGLG00000010633	-	98	68.697

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000003950	-	97	93.450	ENSG00000174780	SRP72	92	95.567	Homo_sapiens
ENSHGLG00000003950	-	99	61.184	ENSAPOG00000019438	srp72	97	60.811	Acanthochromis_polyacanthus
ENSHGLG00000003950	-	97	92.140	ENSAMEG00000008469	SRP72	86	92.140	Ailuropoda_melanoleuca
ENSHGLG00000003950	-	99	69.333	ENSACIG00000000488	srp72	86	69.333	Amphilophus_citrinellus
ENSHGLG00000003950	-	100	69.432	ENSAOCG00000011256	srp72	86	69.432	Amphiprion_ocellaris
ENSHGLG00000003950	-	100	68.996	ENSAPEG00000001512	srp72	86	68.996	Amphiprion_percula
ENSHGLG00000003950	-	90	68.000	ENSATEG00000006781	srp72	97	58.763	Anabas_testudineus
ENSHGLG00000003950	-	98	76.037	ENSAPLG00000008751	SRP72	84	76.037	Anas_platyrhynchos
ENSHGLG00000003950	-	95	79.545	ENSACAG00000002381	SRP72	85	78.070	Anolis_carolinensis
ENSHGLG00000003950	-	94	91.703	ENSANAG00000020836	-	97	79.461	Aotus_nancymaae
ENSHGLG00000003950	-	99	68.444	ENSACLG00000014617	srp72	86	68.444	Astatotilapia_calliptera
ENSHGLG00000003950	-	97	70.044	ENSAMXG00000004011	srp72	86	70.044	Astyanax_mexicanus
ENSHGLG00000003950	-	97	93.013	ENSBTAG00000010593	SRP72	86	93.013	Bos_taurus
ENSHGLG00000003950	-	67	33.908	WBGene00017245	srpa-72	61	32.759	Caenorhabditis_elegans
ENSHGLG00000003950	-	97	90.830	ENSCJAG00000017998	SRP72	86	90.830	Callithrix_jacchus
ENSHGLG00000003950	-	97	93.013	ENSCAFG00000002244	SRP72	86	93.013	Canis_familiaris
ENSHGLG00000003950	-	97	93.013	ENSCAFG00020027338	SRP72	86	92.576	Canis_lupus_dingo
ENSHGLG00000003950	-	97	86.522	ENSCHIG00000021465	SRP72	86	86.522	Capra_hircus
ENSHGLG00000003950	-	96	92.308	ENSTSYG00000010571	-	96	80.438	Carlito_syrichta
ENSHGLG00000003950	-	82	74.380	ENSCAPG00000016668	SRP72	90	77.605	Cavia_aperea
ENSHGLG00000003950	-	97	93.450	ENSCPOG00000000218	SRP72	86	93.450	Cavia_porcellus
ENSHGLG00000003950	-	97	87.336	ENSCCAG00000030830	-	86	87.336	Cebus_capucinus
ENSHGLG00000003950	-	94	90.393	ENSCCAG00000030683	-	83	90.393	Cebus_capucinus
ENSHGLG00000003950	-	97	93.450	ENSCATG00000008072	SRP72	86	93.450	Cercocebus_atys
ENSHGLG00000003950	-	97	74.375	ENSCATG00000045359	-	82	74.132	Cercocebus_atys
ENSHGLG00000003950	-	97	93.450	ENSCLAG00000003571	SRP72	86	93.450	Chinchilla_lanigera
ENSHGLG00000003950	-	97	93.450	ENSCSAG00000005079	SRP72	86	93.450	Chlorocebus_sabaeus
ENSHGLG00000003950	-	80	94.068	ENSCHOG00000013240	SRP72	70	94.068	Choloepus_hoffmanni
ENSHGLG00000003950	-	95	81.019	ENSCPBG00000015015	SRP72	86	78.603	Chrysemys_picta_bellii
ENSHGLG00000003950	-	93	40.639	ENSCING00000002417	-	83	40.455	Ciona_intestinalis
ENSHGLG00000003950	-	90	39.171	ENSCSAVG00000011288	-	99	33.692	Ciona_savignyi
ENSHGLG00000003950	-	99	68.149	ENSCANG00000037920	-	97	68.373	Colobus_angolensis_palliatus
ENSHGLG00000003950	-	97	93.450	ENSCANG00000041709	SRP72	86	93.450	Colobus_angolensis_palliatus
ENSHGLG00000003950	-	100	93.886	ENSCGRG00001013548	Srp72	86	93.886	Cricetulus_griseus_chok1gshd
ENSHGLG00000003950	-	93	94.271	ENSCGRG00000003013	Srp72	84	94.271	Cricetulus_griseus_crigri
ENSHGLG00000003950	-	98	70.667	ENSCSEG00000003616	srp72	85	70.667	Cynoglossus_semilaevis
ENSHGLG00000003950	-	89	70.222	ENSCVAG00000001520	srp72	87	70.222	Cyprinodon_variegatus
ENSHGLG00000003950	-	81	72.667	ENSDARG00000014139	srp72	84	72.667	Danio_rerio
ENSHGLG00000003950	-	97	90.830	ENSDNOG00000039012	SRP72	72	90.830	Dasypus_novemcinctus
ENSHGLG00000003950	-	95	91.324	ENSDORG00000000171	Srp72	86	90.351	Dipodomys_ordii
ENSHGLG00000003950	-	86	46.269	FBgn0038810	Srp72	82	44.595	Drosophila_melanogaster
ENSHGLG00000003950	-	95	89.908	ENSETEG00000005191	SRP72	86	90.000	Echinops_telfairi
ENSHGLG00000003950	-	83	45.941	ENSEBUG00000003696	srp72	97	45.957	Eptatretus_burgeri
ENSHGLG00000003950	-	97	92.140	ENSEASG00005017747	SRP72	86	92.140	Equus_asinus_asinus
ENSHGLG00000003950	-	97	91.703	ENSECAG00000006920	SRP72	86	91.703	Equus_caballus
ENSHGLG00000003950	-	99	68.889	ENSELUG00000022415	srp72	85	68.889	Esox_lucius
ENSHGLG00000003950	-	96	92.308	ENSFCAG00000027600	SRP72	86	91.739	Felis_catus
ENSHGLG00000003950	-	95	81.019	ENSFALG00000006713	SRP72	86	77.974	Ficedula_albicollis
ENSHGLG00000003950	-	96	58.435	ENSFDAG00000009793	-	95	58.435	Fukomys_damarensis
ENSHGLG00000003950	-	97	92.576	ENSFDAG00000002014	-	86	92.576	Fukomys_damarensis
ENSHGLG00000003950	-	99	68.860	ENSFHEG00000017652	srp72	80	68.860	Fundulus_heteroclitus
ENSHGLG00000003950	-	96	67.556	ENSGMOG00000005986	srp72	85	67.556	Gadus_morhua
ENSHGLG00000003950	-	95	80.093	ENSGALG00000011403	SRP72	86	77.391	Gallus_gallus
ENSHGLG00000003950	-	97	70.667	ENSGAFG00000017762	srp72	85	70.667	Gambusia_affinis
ENSHGLG00000003950	-	99	66.667	ENSGACG00000016749	srp72	86	66.667	Gasterosteus_aculeatus
ENSHGLG00000003950	-	82	82.877	ENSGAGG00000024611	SRP72	82	82.877	Gopherus_agassizii
ENSHGLG00000003950	-	97	92.576	ENSGGOG00000013234	-	86	92.576	Gorilla_gorilla
ENSHGLG00000003950	-	99	69.333	ENSHBUG00000020723	srp72	86	69.333	Haplochromis_burtoni
ENSHGLG00000003950	-	97	94.760	ENSHGLG00100009021	SRP72	86	94.760	Heterocephalus_glaber_male
ENSHGLG00000003950	-	97	90.830	ENSHGLG00100011236	-	86	90.830	Heterocephalus_glaber_male
ENSHGLG00000003950	-	97	66.552	ENSHGLG00100009346	-	97	68.268	Heterocephalus_glaber_male
ENSHGLG00000003950	-	100	99.817	ENSHGLG00100017133	-	100	99.817	Heterocephalus_glaber_male
ENSHGLG00000003950	-	97	67.556	ENSHCOG00000013760	srp72	86	67.556	Hippocampus_comes
ENSHGLG00000003950	-	97	69.778	ENSIPUG00000000210	srp72	85	69.778	Ictalurus_punctatus
ENSHGLG00000003950	-	97	93.886	ENSSTOG00000007305	SRP72	86	93.886	Ictidomys_tridecemlineatus
ENSHGLG00000003950	-	95	91.284	ENSJJAG00000018324	Srp72	86	90.909	Jaculus_jaculus
ENSHGLG00000003950	-	97	68.750	ENSKMAG00000003776	srp72	85	68.750	Kryptolebias_marmoratus
ENSHGLG00000003950	-	97	74.222	ENSLOCG00000002628	srp72	85	74.222	Lepisosteus_oculatus
ENSHGLG00000003950	-	97	92.576	ENSLAFG00000018307	SRP72	86	92.576	Loxodonta_africana
ENSHGLG00000003950	-	97	74.375	ENSMFAG00000037164	-	84	74.051	Macaca_fascicularis
ENSHGLG00000003950	-	97	93.013	ENSMFAG00000031065	SRP72	86	93.013	Macaca_fascicularis
ENSHGLG00000003950	-	92	69.753	ENSMMUG00000021262	-	81	69.470	Macaca_mulatta
ENSHGLG00000003950	-	98	93.013	ENSMMUG00000016368	SRP72	86	93.013	Macaca_mulatta
ENSHGLG00000003950	-	97	93.013	ENSMNEG00000038065	-	86	93.013	Macaca_nemestrina
ENSHGLG00000003950	-	94	93.450	ENSMLEG00000030140	-	83	93.450	Mandrillus_leucophaeus
ENSHGLG00000003950	-	99	67.105	ENSMAMG00000014989	srp72	76	67.105	Mastacembelus_armatus
ENSHGLG00000003950	-	99	68.889	ENSMZEG00005003325	srp72	86	68.889	Maylandia_zebra
ENSHGLG00000003950	-	90	70.487	ENSMGAG00000008567	SRP72	85	71.060	Meleagris_gallopavo
ENSHGLG00000003950	-	98	93.578	ENSMAUG00000001237	Srp72	86	93.478	Mesocricetus_auratus
ENSHGLG00000003950	-	94	91.703	ENSMICG00000008507	-	83	91.703	Microcebus_murinus
ENSHGLG00000003950	-	100	93.886	ENSMOCG00000020309	Srp72	86	93.886	Microtus_ochrogaster
ENSHGLG00000003950	-	99	64.444	ENSMMOG00000002627	srp72	86	64.444	Mola_mola
ENSHGLG00000003950	-	95	84.722	ENSMODG00000020697	SRP72	86	84.279	Monodelphis_domestica
ENSHGLG00000003950	-	99	68.000	ENSMALG00000003747	srp72	97	57.555	Monopterus_albus
ENSHGLG00000003950	-	100	93.450	MGP_CAROLIEiJ_G0027323	Srp72	86	93.450	Mus_caroli
ENSHGLG00000003950	-	100	93.450	ENSMUSG00000036323	Srp72	86	93.450	Mus_musculus
ENSHGLG00000003950	-	99	93.213	MGP_PahariEiJ_G0017103	Srp72	86	92.208	Mus_pahari
ENSHGLG00000003950	-	100	93.450	MGP_SPRETEiJ_G0028317	Srp72	86	93.450	Mus_spretus
ENSHGLG00000003950	-	97	90.830	ENSMPUG00000004828	SRP72	86	90.830	Mustela_putorius_furo
ENSHGLG00000003950	-	95	90.411	ENSMLUG00000007344	SRP72	86	89.270	Myotis_lucifugus
ENSHGLG00000003950	-	100	91.703	ENSNGAG00000012595	Srp72	86	91.703	Nannospalax_galili
ENSHGLG00000003950	-	99	69.778	ENSNBRG00000014492	srp72	86	69.778	Neolamprologus_brichardi
ENSHGLG00000003950	-	97	79.718	ENSNLEG00000008806	-	97	79.718	Nomascus_leucogenys
ENSHGLG00000003950	-	83	84.722	ENSMEUG00000005164	SRP72	76	83.913	Notamacropus_eugenii
ENSHGLG00000003950	-	97	89.520	ENSOPRG00000012521	SRP72	86	89.520	Ochotona_princeps
ENSHGLG00000003950	-	97	86.087	ENSODEG00000012214	SRP72	86	86.087	Octodon_degus
ENSHGLG00000003950	-	99	68.860	ENSONIG00000001446	srp72	86	68.860	Oreochromis_niloticus
ENSHGLG00000003950	-	96	76.923	ENSOANG00000008562	SRP72	85	76.316	Ornithorhynchus_anatinus
ENSHGLG00000003950	-	97	92.140	ENSOCUG00000012226	SRP72	86	92.140	Oryctolagus_cuniculus
ENSHGLG00000003950	-	99	69.333	ENSORLG00000020418	srp72	97	59.545	Oryzias_latipes
ENSHGLG00000003950	-	99	68.444	ENSORLG00020009138	srp72	83	68.444	Oryzias_latipes_hni
ENSHGLG00000003950	-	99	68.444	ENSORLG00015018251	srp72	86	68.444	Oryzias_latipes_hsok
ENSHGLG00000003950	-	97	69.333	ENSOMEG00000022008	srp72	86	69.333	Oryzias_melastigma
ENSHGLG00000003950	-	97	90.393	ENSOGAG00000003578	SRP72	86	90.393	Otolemur_garnettii
ENSHGLG00000003950	-	97	93.013	ENSOARG00000004329	SRP72	86	93.013	Ovis_aries
ENSHGLG00000003950	-	75	65.493	ENSPPAG00000032490	-	86	60.194	Pan_paniscus
ENSHGLG00000003950	-	99	56.977	ENSPPAG00000011428	-	95	58.179	Pan_paniscus
ENSHGLG00000003950	-	97	93.450	ENSPPAG00000042265	SRP72	86	93.450	Pan_paniscus
ENSHGLG00000003950	-	97	92.140	ENSPPRG00000015991	SRP72	86	92.140	Panthera_pardus
ENSHGLG00000003950	-	97	92.140	ENSPTIG00000018786	SRP72	86	92.140	Panthera_tigris_altaica
ENSHGLG00000003950	-	99	68.559	ENSPTRG00000048100	-	82	70.513	Pan_troglodytes
ENSHGLG00000003950	-	76	65.035	ENSPTRG00000043609	-	95	58.216	Pan_troglodytes
ENSHGLG00000003950	-	97	93.450	ENSPTRG00000048466	-	86	93.450	Pan_troglodytes
ENSHGLG00000003950	-	92	73.457	ENSPANG00000030230	-	84	73.354	Papio_anubis
ENSHGLG00000003950	-	97	93.450	ENSPANG00000005495	SRP72	86	93.450	Papio_anubis
ENSHGLG00000003950	-	92	78.392	ENSPSIG00000003003	SRP72	86	78.392	Pelodiscus_sinensis
ENSHGLG00000003950	-	98	92.661	ENSPEMG00000012828	-	86	91.379	Peromyscus_maniculatus_bairdii
ENSHGLG00000003950	-	95	85.000	ENSPCIG00000000732	SRP72	85	83.772	Phascolarctos_cinereus
ENSHGLG00000003950	-	97	70.667	ENSPFOG00000003480	srp72	85	70.667	Poecilia_formosa
ENSHGLG00000003950	-	97	70.667	ENSPLAG00000020122	srp72	85	70.667	Poecilia_latipinna
ENSHGLG00000003950	-	97	70.222	ENSPMEG00000019988	srp72	85	70.222	Poecilia_mexicana
ENSHGLG00000003950	-	97	70.667	ENSPREG00000006218	srp72	97	60.914	Poecilia_reticulata
ENSHGLG00000003950	-	97	93.013	ENSPPYG00000014752	-	67	93.013	Pongo_abelii
ENSHGLG00000003950	-	55	67.714	ENSPPYG00000009152	-	87	67.714	Pongo_abelii
ENSHGLG00000003950	-	97	93.450	ENSPVAG00000005590	SRP72	86	93.450	Pteropus_vampyrus
ENSHGLG00000003950	-	99	69.333	ENSPNYG00000001916	srp72	86	69.333	Pundamilia_nyererei
ENSHGLG00000003950	-	97	68.722	ENSPNAG00000022424	srp72	86	68.722	Pygocentrus_nattereri
ENSHGLG00000003950	-	100	93.886	ENSRNOG00000002100	LOC108348180	86	93.886	Rattus_norvegicus
ENSHGLG00000003950	-	98	66.667	ENSRBIG00000029328	-	96	66.483	Rhinopithecus_bieti
ENSHGLG00000003950	-	97	79.310	ENSRBIG00000042069	SRP72	97	74.368	Rhinopithecus_bieti
ENSHGLG00000003950	-	97	93.450	ENSRROG00000035704	SRP72	86	93.450	Rhinopithecus_roxellana
ENSHGLG00000003950	-	91	85.204	ENSSHAG00000000614	SRP72	86	75.862	Sarcophilus_harrisii
ENSHGLG00000003950	-	99	72.889	ENSSFOG00015002026	srp72	85	72.889	Scleropages_formosus
ENSHGLG00000003950	-	97	67.111	ENSSMAG00000007639	srp72	86	67.111	Scophthalmus_maximus
ENSHGLG00000003950	-	99	67.982	ENSSDUG00000007345	srp72	85	68.722	Seriola_dumerili
ENSHGLG00000003950	-	97	68.421	ENSSLDG00000021819	srp72	86	67.265	Seriola_lalandi_dorsalis
ENSHGLG00000003950	-	77	74.785	ENSSARG00000005804	SRP72	70	74.785	Sorex_araneus
ENSHGLG00000003950	-	95	81.019	ENSSPUG00000009740	SRP72	86	78.947	Sphenodon_punctatus
ENSHGLG00000003950	-	99	68.444	ENSSPAG00000011565	srp72	86	68.444	Stegastes_partitus
ENSHGLG00000003950	-	99	89.140	ENSSSCG00000008900	SRP72	86	88.696	Sus_scrofa
ENSHGLG00000003950	-	95	80.556	ENSTGUG00000004767	SRP72	86	77.093	Taeniopygia_guttata
ENSHGLG00000003950	-	97	66.667	ENSTRUG00000009831	srp72	85	66.667	Takifugu_rubripes
ENSHGLG00000003950	-	99	67.982	ENSTNIG00000013073	srp72	86	67.982	Tetraodon_nigroviridis
ENSHGLG00000003950	-	77	80.508	ENSTBEG00000007394	SRP72	84	67.049	Tupaia_belangeri
ENSHGLG00000003950	-	90	93.229	ENSTTRG00000010945	SRP72	85	93.229	Tursiops_truncatus
ENSHGLG00000003950	-	55	79.656	ENSUAMG00000001701	SRP72	92	79.656	Ursus_americanus
ENSHGLG00000003950	-	97	91.703	ENSUMAG00000008151	SRP72	86	91.703	Ursus_maritimus
ENSHGLG00000003950	-	97	93.450	ENSVPAG00000000458	SRP72	87	93.450	Vicugna_pacos
ENSHGLG00000003950	-	97	92.576	ENSVVUG00000006020	SRP72	86	92.576	Vulpes_vulpes
ENSHGLG00000003950	-	93	68.394	ENSXETG00000010205	srp72	85	68.394	Xenopus_tropicalis
ENSHGLG00000003950	-	97	70.222	ENSXMAG00000018000	srp72	85	70.614	Xiphophorus_maculatus