EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000004478 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 2789 bases
Position: chrJH602093.1:10590086-10592874
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000006129	RRM_1	PF00076.22	3.9e-12	1	1
ENSHGLP00000006129	RRM_3	PF08777.11	3.7e-24	1	1
ENSHGLP00000006129	La	PF05383.17	3.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000006204	-	1191	-	ENSHGLP00000006129	396 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000004478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000004478's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000004478	-	100	82.266	ENSHGLG00000005832	-	100	82.266
ENSHGLG00000004478	-	100	88.647	ENSHGLG00000017580	-	100	88.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000004478	-	100	86.585	ENSG00000138385	SSB	100	88.333	Homo_sapiens
ENSHGLG00000004478	-	98	49.876	ENSAPOG00000003448	ssb	99	50.249	Acanthochromis_polyacanthus
ENSHGLG00000004478	-	100	83.412	ENSAMEG00000010507	SSB	100	83.412	Ailuropoda_melanoleuca
ENSHGLG00000004478	-	89	54.017	ENSACIG00000001738	ssb	94	54.017	Amphilophus_citrinellus
ENSHGLG00000004478	-	98	50.124	ENSAOCG00000020398	ssb	99	50.746	Amphiprion_ocellaris
ENSHGLG00000004478	-	98	50.372	ENSAPEG00000020395	ssb	99	50.995	Amphiprion_percula
ENSHGLG00000004478	-	99	53.071	ENSATEG00000016884	ssb	100	53.563	Anabas_testudineus
ENSHGLG00000004478	-	100	65.808	ENSAPLG00000006109	SSB	100	66.589	Anas_platyrhynchos
ENSHGLG00000004478	-	100	62.683	ENSACAG00000017008	SSB	99	62.927	Anolis_carolinensis
ENSHGLG00000004478	-	100	77.778	ENSANAG00000027195	-	100	77.778	Aotus_nancymaae
ENSHGLG00000004478	-	97	51.015	ENSACLG00000010798	ssb	98	51.015	Astatotilapia_calliptera
ENSHGLG00000004478	-	98	50.732	ENSAMXG00000012606	ssb	99	52.099	Astyanax_mexicanus
ENSHGLG00000004478	-	100	86.453	ENSBTAG00000008716	SSB	100	86.453	Bos_taurus
ENSHGLG00000004478	-	73	31.579	WBGene00016653	C44E4.4	76	31.579	Caenorhabditis_elegans
ENSHGLG00000004478	-	100	86.241	ENSCJAG00000045073	SSB	100	86.241	Callithrix_jacchus
ENSHGLG00000004478	-	100	86.520	ENSCAFG00000012418	SSB	100	86.520	Canis_familiaris
ENSHGLG00000004478	-	100	86.520	ENSCAFG00020002900	SSB	100	86.520	Canis_lupus_dingo
ENSHGLG00000004478	-	100	86.241	ENSCHIG00000022624	-	100	86.241	Capra_hircus
ENSHGLG00000004478	-	100	80.344	ENSCHIG00000022196	-	100	80.344	Capra_hircus
ENSHGLG00000004478	-	100	86.732	ENSTSYG00000000097	SSB	100	86.732	Carlito_syrichta
ENSHGLG00000004478	-	100	89.435	ENSCPOG00000003338	SSB	100	89.435	Cavia_porcellus
ENSHGLG00000004478	-	100	86.732	ENSCCAG00000035147	SSB	100	86.732	Cebus_capucinus
ENSHGLG00000004478	-	100	66.917	ENSCATG00000042909	-	100	66.917	Cercocebus_atys
ENSHGLG00000004478	-	100	71.642	ENSCATG00000036701	SSB	100	71.642	Cercocebus_atys
ENSHGLG00000004478	-	100	89.189	ENSCLAG00000015617	-	100	89.189	Chinchilla_lanigera
ENSHGLG00000004478	-	98	79.146	ENSCSAG00000018390	-	100	79.146	Chlorocebus_sabaeus
ENSHGLG00000004478	-	100	86.978	ENSCSAG00000015200	SSB	89	86.978	Chlorocebus_sabaeus
ENSHGLG00000004478	-	100	86.486	ENSCHOG00000007763	SSB	100	86.486	Choloepus_hoffmanni
ENSHGLG00000004478	-	100	72.263	ENSCPBG00000006519	SSB	100	73.479	Chrysemys_picta_bellii
ENSHGLG00000004478	-	100	77.444	ENSCANG00000033240	-	100	77.444	Colobus_angolensis_palliatus
ENSHGLG00000004478	-	100	86.978	ENSCANG00000027695	SSB	100	86.978	Colobus_angolensis_palliatus
ENSHGLG00000004478	-	98	71.247	ENSCANG00000028838	-	95	71.247	Colobus_angolensis_palliatus
ENSHGLG00000004478	-	100	70.388	ENSCGRG00001024831	Ssb	100	71.602	Cricetulus_griseus_chok1gshd
ENSHGLG00000004478	-	100	70.388	ENSCGRG00000005387	Ssb	100	71.602	Cricetulus_griseus_crigri
ENSHGLG00000004478	-	98	52.239	ENSCSEG00000011599	ssb	99	52.985	Cynoglossus_semilaevis
ENSHGLG00000004478	-	99	51.961	ENSCVAG00000021558	ssb	100	52.451	Cyprinodon_variegatus
ENSHGLG00000004478	-	98	53.960	ENSDARG00000029252	ssb	99	53.846	Danio_rerio
ENSHGLG00000004478	-	100	86.486	ENSDNOG00000013450	SSB	100	86.486	Dasypus_novemcinctus
ENSHGLG00000004478	-	100	76.998	ENSDORG00000005543	Ssb	100	76.998	Dipodomys_ordii
ENSHGLG00000004478	-	57	86.070	ENSETEG00000004614	-	61	86.070	Echinops_telfairi
ENSHGLG00000004478	-	97	45.431	ENSEBUG00000001237	ssb	96	45.867	Eptatretus_burgeri
ENSHGLG00000004478	-	100	87.715	ENSEASG00005022835	SSB	100	87.715	Equus_asinus_asinus
ENSHGLG00000004478	-	100	87.961	ENSECAG00000018495	SSB	100	87.961	Equus_caballus
ENSHGLG00000004478	-	76	69.481	ENSEEUG00000008077	SSB	78	69.481	Erinaceus_europaeus
ENSHGLG00000004478	-	98	53.846	ENSELUG00000020929	ssb	99	54.975	Esox_lucius
ENSHGLG00000004478	-	100	86.275	ENSFCAG00000011601	SSB	100	86.275	Felis_catus
ENSHGLG00000004478	-	100	68.059	ENSFALG00000000930	SSB	100	69.363	Ficedula_albicollis
ENSHGLG00000004478	-	100	90.172	ENSFDAG00000000598	SSB	100	90.172	Fukomys_damarensis
ENSHGLG00000004478	-	72	49.502	ENSFHEG00000003268	ssb	95	49.351	Fundulus_heteroclitus
ENSHGLG00000004478	-	97	50.370	ENSGMOG00000002664	ssb	99	50.617	Gadus_morhua
ENSHGLG00000004478	-	100	70.098	ENSGALG00000009677	SSB	100	70.098	Gallus_gallus
ENSHGLG00000004478	-	99	50.490	ENSGAFG00000002749	ssb	100	50.735	Gambusia_affinis
ENSHGLG00000004478	-	97	49.136	ENSGACG00000005107	ssb	98	49.630	Gasterosteus_aculeatus
ENSHGLG00000004478	-	100	72.506	ENSGAGG00000007807	SSB	100	73.479	Gopherus_agassizii
ENSHGLG00000004478	-	57	83.550	ENSGGOG00000023471	-	93	83.550	Gorilla_gorilla
ENSHGLG00000004478	-	100	74.436	ENSGGOG00000024891	-	100	74.436	Gorilla_gorilla
ENSHGLG00000004478	-	97	50.508	ENSHBUG00000006584	ssb	98	50.508	Haplochromis_burtoni
ENSHGLG00000004478	-	100	78.571	ENSHGLG00100008767	-	100	78.571	Heterocephalus_glaber_male
ENSHGLG00000004478	-	100	88.647	ENSHGLG00100003084	-	100	88.647	Heterocephalus_glaber_male
ENSHGLG00000004478	-	99	48.916	ENSHCOG00000019011	ssb	100	50.000	Hippocampus_comes
ENSHGLG00000004478	-	98	54.034	ENSIPUG00000003681	SSB	99	54.433	Ictalurus_punctatus
ENSHGLG00000004478	-	100	87.715	ENSSTOG00000008416	SSB	100	87.715	Ictidomys_tridecemlineatus
ENSHGLG00000004478	-	100	72.471	ENSJJAG00000023158	-	100	72.471	Jaculus_jaculus
ENSHGLG00000004478	-	99	62.129	ENSJJAG00000016250	-	99	62.129	Jaculus_jaculus
ENSHGLG00000004478	-	97	51.256	ENSKMAG00000017317	ssb	98	51.508	Kryptolebias_marmoratus
ENSHGLG00000004478	-	98	50.620	ENSLBEG00000017345	ssb	99	51.244	Labrus_bergylta
ENSHGLG00000004478	-	99	62.103	ENSLACG00000014056	SSB	99	63.081	Latimeria_chalumnae
ENSHGLG00000004478	-	98	61.042	ENSLOCG00000007933	ssb	99	61.538	Lepisosteus_oculatus
ENSHGLG00000004478	-	74	64.686	ENSLAFG00000026721	-	99	64.686	Loxodonta_africana
ENSHGLG00000004478	-	100	81.368	ENSLAFG00000000867	-	100	82.075	Loxodonta_africana
ENSHGLG00000004478	-	100	74.568	ENSLAFG00000028909	-	100	74.568	Loxodonta_africana
ENSHGLG00000004478	-	88	76.923	ENSMFAG00000041478	-	100	76.923	Macaca_fascicularis
ENSHGLG00000004478	-	100	87.224	ENSMFAG00000039066	SSB	100	87.224	Macaca_fascicularis
ENSHGLG00000004478	-	99	63.224	ENSMMUG00000039889	-	100	63.224	Macaca_mulatta
ENSHGLG00000004478	-	100	87.224	ENSMMUG00000023051	SSB	100	87.224	Macaca_mulatta
ENSHGLG00000004478	-	100	75.810	ENSMMUG00000011724	-	97	75.810	Macaca_mulatta
ENSHGLG00000004478	-	88	76.923	ENSMNEG00000034698	-	100	76.923	Macaca_nemestrina
ENSHGLG00000004478	-	100	74.757	ENSMNEG00000028321	SSB	100	75.243	Macaca_nemestrina
ENSHGLG00000004478	-	100	87.224	ENSMLEG00000035717	SSB	100	87.224	Mandrillus_leucophaeus
ENSHGLG00000004478	-	100	62.907	ENSMLEG00000042644	-	100	62.907	Mandrillus_leucophaeus
ENSHGLG00000004478	-	99	53.808	ENSMAMG00000004800	ssb	100	54.300	Mastacembelus_armatus
ENSHGLG00000004478	-	97	51.015	ENSMZEG00005005749	ssb	98	51.015	Maylandia_zebra
ENSHGLG00000004478	-	100	69.363	ENSMGAG00000010328	SSB	100	69.853	Meleagris_gallopavo
ENSHGLG00000004478	-	99	87.901	ENSMICG00000028252	-	99	87.901	Microcebus_murinus
ENSHGLG00000004478	-	98	79.699	ENSMICG00000033304	-	93	82.787	Microcebus_murinus
ENSHGLG00000004478	-	100	70.743	ENSMODG00000008227	-	100	71.703	Monodelphis_domestica
ENSHGLG00000004478	-	85	72.327	ENSMODG00000007027	-	99	72.327	Monodelphis_domestica
ENSHGLG00000004478	-	100	55.583	ENSMODG00000019271	-	100	55.831	Monodelphis_domestica
ENSHGLG00000004478	-	88	54.167	ENSMALG00000008045	ssb	89	54.595	Monopterus_albus
ENSHGLG00000004478	-	100	69.504	MGP_CAROLIEiJ_G0023629	-	100	81.522	Mus_caroli
ENSHGLG00000004478	-	100	68.794	ENSMUSG00000068882	Ssb	100	81.522	Mus_musculus
ENSHGLG00000004478	-	100	69.976	MGP_PahariEiJ_G0025081	-	100	82.609	Mus_pahari
ENSHGLG00000004478	-	100	68.794	MGP_SPRETEiJ_G0024551	Ssb	100	81.522	Mus_spretus
ENSHGLG00000004478	-	100	86.978	ENSMPUG00000000785	SSB	100	86.978	Mustela_putorius_furo
ENSHGLG00000004478	-	100	82.227	ENSMLUG00000016316	SSB	100	82.227	Myotis_lucifugus
ENSHGLG00000004478	-	97	51.015	ENSNBRG00000012661	ssb	98	51.015	Neolamprologus_brichardi
ENSHGLG00000004478	-	100	65.500	ENSNLEG00000028754	-	100	65.500	Nomascus_leucogenys
ENSHGLG00000004478	-	100	87.224	ENSNLEG00000004958	SSB	100	87.224	Nomascus_leucogenys
ENSHGLG00000004478	-	61	82.800	ENSMEUG00000001650	-	100	82.800	Notamacropus_eugenii
ENSHGLG00000004478	-	73	69.416	ENSOPRG00000008475	-	100	70.103	Ochotona_princeps
ENSHGLG00000004478	-	93	83.069	ENSODEG00000004202	-	100	83.069	Octodon_degus
ENSHGLG00000004478	-	97	50.508	ENSONIG00000008776	ssb	98	50.508	Oreochromis_niloticus
ENSHGLG00000004478	-	100	75.921	ENSOANG00000008543	SSB	100	76.658	Ornithorhynchus_anatinus
ENSHGLG00000004478	-	100	87.224	ENSOCUG00000010396	SSB	100	87.224	Oryctolagus_cuniculus
ENSHGLG00000004478	-	99	51.597	ENSORLG00000017208	ssb	100	52.088	Oryzias_latipes
ENSHGLG00000004478	-	99	51.597	ENSORLG00020022574	ssb	100	52.088	Oryzias_latipes_hni
ENSHGLG00000004478	-	99	51.597	ENSORLG00015016592	ssb	100	51.843	Oryzias_latipes_hsok
ENSHGLG00000004478	-	98	52.239	ENSOMEG00000003193	ssb	99	52.618	Oryzias_melastigma
ENSHGLG00000004478	-	100	82.311	ENSOGAG00000029768	SSB	100	82.311	Otolemur_garnettii
ENSHGLG00000004478	-	100	85.749	ENSOARG00000002906	SSB	100	85.749	Ovis_aries
ENSHGLG00000004478	-	100	73.434	ENSPPAG00000032427	-	100	85.366	Pan_paniscus
ENSHGLG00000004478	-	100	86.585	ENSPPAG00000042673	SSB	100	86.585	Pan_paniscus
ENSHGLG00000004478	-	94	68.718	ENSPPAG00000006189	-	99	68.718	Pan_paniscus
ENSHGLG00000004478	-	100	86.275	ENSPPRG00000006599	SSB	100	86.275	Panthera_pardus
ENSHGLG00000004478	-	100	86.275	ENSPTIG00000011021	SSB	97	86.275	Panthera_tigris_altaica
ENSHGLG00000004478	-	100	86.585	ENSPTRG00000012620	SSB	100	86.585	Pan_troglodytes
ENSHGLG00000004478	-	100	69.424	ENSPTRG00000042880	-	100	69.424	Pan_troglodytes
ENSHGLG00000004478	-	100	87.224	ENSPANG00000007440	SSB	100	87.224	Papio_anubis
ENSHGLG00000004478	-	100	64.411	ENSPANG00000034126	-	100	64.411	Papio_anubis
ENSHGLG00000004478	-	98	60.814	ENSPANG00000031877	-	95	60.814	Papio_anubis
ENSHGLG00000004478	-	98	57.778	ENSPKIG00000019325	ssb	99	58.168	Paramormyrops_kingsleyae
ENSHGLG00000004478	-	100	69.343	ENSPSIG00000002265	SSB	93	71.046	Pelodiscus_sinensis
ENSHGLG00000004478	-	84	51.003	ENSPMGG00000020075	ssb	91	51.429	Periophthalmus_magnuspinnatus
ENSHGLG00000004478	-	81	46.828	ENSPMAG00000002982	ssb	100	43.418	Petromyzon_marinus
ENSHGLG00000004478	-	100	74.510	ENSPCIG00000028591	-	100	76.716	Phascolarctos_cinereus
ENSHGLG00000004478	-	99	51.843	ENSPFOG00000009650	ssb	100	52.088	Poecilia_formosa
ENSHGLG00000004478	-	99	51.597	ENSPLAG00000020498	ssb	100	51.843	Poecilia_latipinna
ENSHGLG00000004478	-	99	51.351	ENSPMEG00000001051	ssb	100	51.843	Poecilia_mexicana
ENSHGLG00000004478	-	94	51.036	ENSPREG00000003708	ssb	99	51.295	Poecilia_reticulata
ENSHGLG00000004478	-	100	87.224	ENSPPYG00000012919	SSB	100	87.224	Pongo_abelii
ENSHGLG00000004478	-	94	82.078	ENSPCAG00000010276	SSB	100	82.857	Procavia_capensis
ENSHGLG00000004478	-	100	76.904	ENSPCOG00000023189	-	100	76.904	Propithecus_coquereli
ENSHGLG00000004478	-	100	85.012	ENSPCOG00000015741	-	100	85.012	Propithecus_coquereli
ENSHGLG00000004478	-	87	86.761	ENSPVAG00000006615	SSB	100	86.761	Pteropus_vampyrus
ENSHGLG00000004478	-	97	51.015	ENSPNYG00000006444	ssb	98	51.015	Pundamilia_nyererei
ENSHGLG00000004478	-	98	52.206	ENSPNAG00000011708	ssb	99	53.202	Pygocentrus_nattereri
ENSHGLG00000004478	-	100	69.976	ENSRNOG00000007998	Ssb	100	69.976	Rattus_norvegicus
ENSHGLG00000004478	-	100	70.488	ENSRNOG00000011606	AABR07061825.1	100	70.488	Rattus_norvegicus
ENSHGLG00000004478	-	93	76.408	ENSRBIG00000041232	-	98	76.408	Rhinopithecus_bieti
ENSHGLG00000004478	-	100	67.750	ENSRBIG00000029918	-	100	67.750	Rhinopithecus_bieti
ENSHGLG00000004478	-	100	70.388	ENSRBIG00000041972	SSB	88	85.217	Rhinopithecus_bieti
ENSHGLG00000004478	-	89	79.558	ENSRBIG00000041608	-	98	79.558	Rhinopithecus_bieti
ENSHGLG00000004478	-	100	86.978	ENSRROG00000040346	SSB	100	86.978	Rhinopithecus_roxellana
ENSHGLG00000004478	-	97	79.000	ENSRROG00000034102	-	98	79.000	Rhinopithecus_roxellana
ENSHGLG00000004478	-	100	75.500	ENSRROG00000007149	-	100	75.500	Rhinopithecus_roxellana
ENSHGLG00000004478	-	98	77.436	ENSRROG00000031684	-	100	77.436	Rhinopithecus_roxellana
ENSHGLG00000004478	-	100	87.224	ENSSBOG00000027204	SSB	100	87.224	Saimiri_boliviensis_boliviensis
ENSHGLG00000004478	-	100	74.328	ENSSHAG00000018062	SSB	100	76.225	Sarcophilus_harrisii
ENSHGLG00000004478	-	99	59.268	ENSSFOG00015000550	ssb	99	59.902	Scleropages_formosus
ENSHGLG00000004478	-	98	49.497	ENSSMAG00000013885	ssb	98	52.151	Scophthalmus_maximus
ENSHGLG00000004478	-	99	52.088	ENSSDUG00000020117	ssb	100	52.334	Seriola_dumerili
ENSHGLG00000004478	-	99	50.000	ENSSLDG00000002525	ssb	100	50.248	Seriola_lalandi_dorsalis
ENSHGLG00000004478	-	94	77.865	ENSSARG00000007747	SSB	100	77.865	Sorex_araneus
ENSHGLG00000004478	-	100	70.488	ENSSPUG00000012112	SSB	100	70.488	Sphenodon_punctatus
ENSHGLG00000004478	-	98	50.372	ENSSPAG00000005696	ssb	98	51.508	Stegastes_partitus
ENSHGLG00000004478	-	98	71.608	ENSSSCG00000015938	SSB	98	72.111	Sus_scrofa
ENSHGLG00000004478	-	100	67.237	ENSTGUG00000007942	SSB	100	69.024	Taeniopygia_guttata
ENSHGLG00000004478	-	99	52.346	ENSTRUG00000017839	ssb	100	52.346	Takifugu_rubripes
ENSHGLG00000004478	-	90	53.804	ENSTNIG00000000915	ssb	100	53.804	Tetraodon_nigroviridis
ENSHGLG00000004478	-	82	85.217	ENSTBEG00000009056	SSB	82	85.217	Tupaia_belangeri
ENSHGLG00000004478	-	100	86.029	ENSTTRG00000002152	SSB	100	86.029	Tursiops_truncatus
ENSHGLG00000004478	-	93	87.599	ENSUAMG00000027833	SSB	99	87.599	Ursus_americanus
ENSHGLG00000004478	-	100	87.010	ENSUMAG00000013907	SSB	100	87.010	Ursus_maritimus
ENSHGLG00000004478	-	100	86.700	ENSVPAG00000007183	SSB	100	86.700	Vicugna_pacos
ENSHGLG00000004478	-	100	86.520	ENSVVUG00000016573	SSB	78	86.520	Vulpes_vulpes
ENSHGLG00000004478	-	100	54.186	ENSXETG00000025402	ssb	100	55.116	Xenopus_tropicalis
ENSHGLG00000004478	-	94	49.091	ENSXCOG00000019109	ssb	99	49.351	Xiphophorus_couchianus
ENSHGLG00000004478	-	99	50.735	ENSXMAG00000004888	ssb	100	50.980	Xiphophorus_maculatus