EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000004492 (Gene tree)
Gene ID: -
Gene Symbol: RTCB
Alias: -
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 19142 bases
Position: chrJH602063.1:2045092-2064233
Accession: 101717628
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000006151	RtcB	PF01139.17	6.6e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000006226	-	3563	XM_004844787	ENSHGLP00000006151	505 (aa)	XP_004844844	G5BPE1

Gene Model

Click here to download ENSHGLG00000004492's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000004492's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000004492	RTCB	93	71.002	ENSHGLG00000001066	-	99	71.002

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000004492	RTCB	100	99.802	ENSG00000100220	RTCB	100	99.802	Homo_sapiens
ENSHGLG00000004492	RTCB	100	94.455	ENSAPOG00000006040	rtcb	100	94.455	Acanthochromis_polyacanthus
ENSHGLG00000004492	RTCB	100	99.604	ENSAMEG00000016152	RTCB	100	99.604	Ailuropoda_melanoleuca
ENSHGLG00000004492	RTCB	100	90.099	ENSACIG00000009083	rtcb	100	90.099	Amphilophus_citrinellus
ENSHGLG00000004492	RTCB	100	94.653	ENSAOCG00000005662	rtcb	100	95.435	Amphiprion_ocellaris
ENSHGLG00000004492	RTCB	100	94.653	ENSAPEG00000024701	rtcb	100	94.653	Amphiprion_percula
ENSHGLG00000004492	RTCB	96	89.938	ENSAPEG00000024653	rtcb	100	89.938	Amphiprion_percula
ENSHGLG00000004492	RTCB	100	94.257	ENSATEG00000000618	rtcb	100	94.257	Anabas_testudineus
ENSHGLG00000004492	RTCB	100	93.642	ENSACAG00000014817	RTCB	100	93.642	Anolis_carolinensis
ENSHGLG00000004492	RTCB	72	97.222	ENSANAG00000023724	-	100	62.846	Aotus_nancymaae
ENSHGLG00000004492	RTCB	100	83.762	ENSANAG00000018191	-	91	83.762	Aotus_nancymaae
ENSHGLG00000004492	RTCB	100	93.069	ENSACLG00000008367	rtcb	100	94.130	Astatotilapia_calliptera
ENSHGLG00000004492	RTCB	100	94.257	ENSAMXG00000042320	rtcb	100	94.257	Astyanax_mexicanus
ENSHGLG00000004492	RTCB	100	99.406	ENSBTAG00000011070	RTCB	100	99.406	Bos_taurus
ENSHGLG00000004492	RTCB	100	72.871	WBGene00008877	rtcb-1	100	72.871	Caenorhabditis_elegans
ENSHGLG00000004492	RTCB	100	99.406	ENSCJAG00000006128	RTCB	100	99.406	Callithrix_jacchus
ENSHGLG00000004492	RTCB	100	99.604	ENSCAFG00000001785	RTCB	100	99.604	Canis_familiaris
ENSHGLG00000004492	RTCB	100	95.248	ENSCAFG00000010789	-	100	95.248	Canis_familiaris
ENSHGLG00000004492	RTCB	87	95.909	ENSCAFG00020018953	-	99	95.909	Canis_lupus_dingo
ENSHGLG00000004492	RTCB	100	99.604	ENSCAFG00020004890	-	100	99.604	Canis_lupus_dingo
ENSHGLG00000004492	RTCB	100	99.604	ENSCHIG00000027009	-	100	99.604	Capra_hircus
ENSHGLG00000004492	RTCB	100	99.010	ENSTSYG00000012320	RTCB	100	99.010	Carlito_syrichta
ENSHGLG00000004492	RTCB	94	99.161	ENSCAPG00000011647	RTCB	96	99.161	Cavia_aperea
ENSHGLG00000004492	RTCB	100	99.406	ENSCCAG00000000618	RTCB	100	99.406	Cebus_capucinus
ENSHGLG00000004492	RTCB	100	99.406	ENSCATG00000033424	RTCB	100	99.406	Cercocebus_atys
ENSHGLG00000004492	RTCB	100	99.208	ENSCLAG00000007997	RTCB	100	99.208	Chinchilla_lanigera
ENSHGLG00000004492	RTCB	100	99.208	ENSCSAG00000008351	RTCB	100	99.208	Chlorocebus_sabaeus
ENSHGLG00000004492	RTCB	100	84.950	ENSCHOG00000009123	RTCB	100	84.950	Choloepus_hoffmanni
ENSHGLG00000004492	RTCB	100	96.436	ENSCPBG00000023184	RTCB	100	96.436	Chrysemys_picta_bellii
ENSHGLG00000004492	RTCB	100	81.584	ENSCING00000003830	-	100	81.584	Ciona_intestinalis
ENSHGLG00000004492	RTCB	100	81.980	ENSCSAVG00000008124	-	100	81.093	Ciona_savignyi
ENSHGLG00000004492	RTCB	100	95.644	ENSCANG00000001891	RTCB	100	95.644	Colobus_angolensis_palliatus
ENSHGLG00000004492	RTCB	100	99.208	ENSCGRG00001011173	Rtcb	100	99.208	Cricetulus_griseus_chok1gshd
ENSHGLG00000004492	RTCB	93	99.575	ENSCGRG00000009587	-	96	99.575	Cricetulus_griseus_crigri
ENSHGLG00000004492	RTCB	100	93.663	ENSCSEG00000003986	rtcb	100	93.663	Cynoglossus_semilaevis
ENSHGLG00000004492	RTCB	82	93.269	ENSCVAG00000000569	rtcb	95	93.269	Cyprinodon_variegatus
ENSHGLG00000004492	RTCB	100	93.861	ENSDARG00000101047	rtcb	100	93.861	Danio_rerio
ENSHGLG00000004492	RTCB	80	96.560	ENSDNOG00000012425	RTCB	99	96.560	Dasypus_novemcinctus
ENSHGLG00000004492	RTCB	100	98.812	ENSDORG00000010855	Rtcb	100	98.812	Dipodomys_ordii
ENSHGLG00000004492	RTCB	99	85.288	FBgn0032781	RtcB	99	85.288	Drosophila_melanogaster
ENSHGLG00000004492	RTCB	100	92.475	ENSETEG00000001988	RTCB	100	92.475	Echinops_telfairi
ENSHGLG00000004492	RTCB	100	85.545	ENSEBUG00000014235	rtcb	100	85.545	Eptatretus_burgeri
ENSHGLG00000004492	RTCB	100	99.604	ENSEASG00005019059	RTCB	100	99.604	Equus_asinus_asinus
ENSHGLG00000004492	RTCB	100	99.604	ENSECAG00000023998	RTCB	100	99.604	Equus_caballus
ENSHGLG00000004492	RTCB	89	90.157	ENSEEUG00000006251	RTCB	100	90.157	Erinaceus_europaeus
ENSHGLG00000004492	RTCB	100	82.609	ENSELUG00000009275	rtcb	100	82.609	Esox_lucius
ENSHGLG00000004492	RTCB	100	99.802	ENSFCAG00000026480	RTCB	100	99.802	Felis_catus
ENSHGLG00000004492	RTCB	100	97.426	ENSFALG00000013334	RTCB	100	97.426	Ficedula_albicollis
ENSHGLG00000004492	RTCB	100	100.000	ENSFDAG00000018150	RTCB	100	100.000	Fukomys_damarensis
ENSHGLG00000004492	RTCB	100	94.257	ENSFHEG00000009595	rtcb	100	94.257	Fundulus_heteroclitus
ENSHGLG00000004492	RTCB	100	91.683	ENSGMOG00000018882	rtcb	100	91.683	Gadus_morhua
ENSHGLG00000004492	RTCB	100	97.228	ENSGALG00000012611	RTCB	100	97.228	Gallus_gallus
ENSHGLG00000004492	RTCB	100	94.653	ENSGAFG00000004198	rtcb	100	94.653	Gambusia_affinis
ENSHGLG00000004492	RTCB	100	93.663	ENSGACG00000000586	rtcb	100	93.663	Gasterosteus_aculeatus
ENSHGLG00000004492	RTCB	93	95.745	ENSGAGG00000019133	RTCB	98	95.745	Gopherus_agassizii
ENSHGLG00000004492	RTCB	100	99.802	ENSGGOG00000011402	RTCB	100	99.802	Gorilla_gorilla
ENSHGLG00000004492	RTCB	100	93.069	ENSHBUG00000020571	rtcb	100	93.069	Haplochromis_burtoni
ENSHGLG00000004492	RTCB	100	100.000	ENSHGLG00100008965	RTCB	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000004492	RTCB	100	91.321	ENSHCOG00000006450	rtcb	100	91.321	Hippocampus_comes
ENSHGLG00000004492	RTCB	100	94.455	ENSIPUG00000015443	rtcb	100	94.455	Ictalurus_punctatus
ENSHGLG00000004492	RTCB	100	99.406	ENSSTOG00000003878	RTCB	100	99.406	Ictidomys_tridecemlineatus
ENSHGLG00000004492	RTCB	100	98.812	ENSJJAG00000010667	Rtcb	100	98.812	Jaculus_jaculus
ENSHGLG00000004492	RTCB	100	94.257	ENSKMAG00000013178	rtcb	100	94.257	Kryptolebias_marmoratus
ENSHGLG00000004492	RTCB	100	93.465	ENSLBEG00000000214	rtcb	100	93.465	Labrus_bergylta
ENSHGLG00000004492	RTCB	100	94.455	ENSLBEG00000010566	RTCB	100	94.455	Labrus_bergylta
ENSHGLG00000004492	RTCB	100	95.248	ENSLACG00000013033	RTCB	100	95.248	Latimeria_chalumnae
ENSHGLG00000004492	RTCB	100	94.455	ENSLOCG00000016515	rtcb	99	94.455	Lepisosteus_oculatus
ENSHGLG00000004492	RTCB	100	98.614	ENSLAFG00000002082	RTCB	100	98.614	Loxodonta_africana
ENSHGLG00000004492	RTCB	100	99.208	ENSMFAG00000034419	RTCB	100	99.208	Macaca_fascicularis
ENSHGLG00000004492	RTCB	100	99.208	ENSMMUG00000006720	RTCB	100	99.208	Macaca_mulatta
ENSHGLG00000004492	RTCB	100	99.208	ENSMNEG00000040669	RTCB	100	99.208	Macaca_nemestrina
ENSHGLG00000004492	RTCB	100	99.406	ENSMLEG00000040505	RTCB	100	99.406	Mandrillus_leucophaeus
ENSHGLG00000004492	RTCB	100	94.257	ENSMAMG00000020676	rtcb	100	94.257	Mastacembelus_armatus
ENSHGLG00000004492	RTCB	100	93.069	ENSMZEG00005018942	rtcb	100	93.069	Maylandia_zebra
ENSHGLG00000004492	RTCB	100	96.844	ENSMGAG00000012805	RTCB	100	96.844	Meleagris_gallopavo
ENSHGLG00000004492	RTCB	60	100.000	ENSMAUG00000008301	Rtcb	100	100.000	Mesocricetus_auratus
ENSHGLG00000004492	RTCB	100	99.604	ENSMICG00000013303	-	100	99.604	Microcebus_murinus
ENSHGLG00000004492	RTCB	100	80.000	ENSMICG00000036677	-	100	80.000	Microcebus_murinus
ENSHGLG00000004492	RTCB	100	99.208	ENSMOCG00000002440	Rtcb	100	99.208	Microtus_ochrogaster
ENSHGLG00000004492	RTCB	100	94.257	ENSMMOG00000005987	rtcb	100	94.257	Mola_mola
ENSHGLG00000004492	RTCB	100	98.218	ENSMODG00000001414	RTCB	100	98.218	Monodelphis_domestica
ENSHGLG00000004492	RTCB	100	94.455	ENSMALG00000007603	rtcb	100	94.455	Monopterus_albus
ENSHGLG00000004492	RTCB	100	99.208	MGP_CAROLIEiJ_G0015689	Rtcb	100	99.208	Mus_caroli
ENSHGLG00000004492	RTCB	100	99.208	ENSMUSG00000001783	Rtcb	100	99.208	Mus_musculus
ENSHGLG00000004492	RTCB	100	99.208	MGP_PahariEiJ_G0031396	Rtcb	100	99.208	Mus_pahari
ENSHGLG00000004492	RTCB	100	99.208	MGP_SPRETEiJ_G0016507	Rtcb	100	99.208	Mus_spretus
ENSHGLG00000004492	RTCB	100	99.604	ENSMPUG00000012285	RTCB	100	99.604	Mustela_putorius_furo
ENSHGLG00000004492	RTCB	100	96.844	ENSMLUG00000007803	RTCB	100	96.844	Myotis_lucifugus
ENSHGLG00000004492	RTCB	75	100.000	ENSNGAG00000005093	Rtcb	100	100.000	Nannospalax_galili
ENSHGLG00000004492	RTCB	100	93.267	ENSNBRG00000017202	rtcb	100	93.267	Neolamprologus_brichardi
ENSHGLG00000004492	RTCB	100	99.802	ENSNLEG00000004960	RTCB	100	99.802	Nomascus_leucogenys
ENSHGLG00000004492	RTCB	100	72.871	ENSMEUG00000007809	-	100	72.871	Notamacropus_eugenii
ENSHGLG00000004492	RTCB	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSHGLG00000004492	RTCB	100	65.545	ENSODEG00000005042	-	100	65.545	Octodon_degus
ENSHGLG00000004492	RTCB	82	100.000	ENSODEG00000013033	-	100	100.000	Octodon_degus
ENSHGLG00000004492	RTCB	100	94.257	ENSONIG00000007474	rtcb	100	94.257	Oreochromis_niloticus
ENSHGLG00000004492	RTCB	100	98.218	ENSOANG00000005524	RTCB	100	98.218	Ornithorhynchus_anatinus
ENSHGLG00000004492	RTCB	93	99.362	ENSOCUG00000008270	RTCB	96	99.362	Oryctolagus_cuniculus
ENSHGLG00000004492	RTCB	100	93.663	ENSORLG00000020093	rtcb	100	93.663	Oryzias_latipes
ENSHGLG00000004492	RTCB	100	93.663	ENSORLG00020003706	rtcb	100	93.663	Oryzias_latipes_hni
ENSHGLG00000004492	RTCB	100	93.861	ENSORLG00015002968	rtcb	100	93.861	Oryzias_latipes_hsok
ENSHGLG00000004492	RTCB	100	93.465	ENSOMEG00000021278	rtcb	100	93.465	Oryzias_melastigma
ENSHGLG00000004492	RTCB	100	99.010	ENSOGAG00000001425	RTCB	100	99.010	Otolemur_garnettii
ENSHGLG00000004492	RTCB	100	99.604	ENSOARG00000018008	RTCB	100	99.604	Ovis_aries
ENSHGLG00000004492	RTCB	100	99.802	ENSPPAG00000028667	RTCB	100	99.802	Pan_paniscus
ENSHGLG00000004492	RTCB	100	99.802	ENSPPRG00000004038	RTCB	100	99.802	Panthera_pardus
ENSHGLG00000004492	RTCB	94	96.421	ENSPTIG00000020499	RTCB	97	96.421	Panthera_tigris_altaica
ENSHGLG00000004492	RTCB	100	99.802	ENSPTRG00000014287	RTCB	100	99.802	Pan_troglodytes
ENSHGLG00000004492	RTCB	100	99.208	ENSPANG00000016035	RTCB	100	99.208	Papio_anubis
ENSHGLG00000004492	RTCB	100	92.871	ENSPKIG00000001881	rtcb	100	92.871	Paramormyrops_kingsleyae
ENSHGLG00000004492	RTCB	91	98.043	ENSPSIG00000011690	RTCB	100	98.043	Pelodiscus_sinensis
ENSHGLG00000004492	RTCB	100	94.455	ENSPMGG00000016672	rtcb	100	94.455	Periophthalmus_magnuspinnatus
ENSHGLG00000004492	RTCB	100	99.208	ENSPEMG00000019548	Rtcb	100	99.208	Peromyscus_maniculatus_bairdii
ENSHGLG00000004492	RTCB	100	91.485	ENSPMAG00000005657	rtcb	100	91.485	Petromyzon_marinus
ENSHGLG00000004492	RTCB	100	98.614	ENSPCIG00000009467	RTCB	100	98.614	Phascolarctos_cinereus
ENSHGLG00000004492	RTCB	100	95.050	ENSPFOG00000003058	rtcb	100	95.050	Poecilia_formosa
ENSHGLG00000004492	RTCB	100	94.851	ENSPLAG00000017663	rtcb	100	94.851	Poecilia_latipinna
ENSHGLG00000004492	RTCB	100	95.050	ENSPMEG00000006227	rtcb	100	95.050	Poecilia_mexicana
ENSHGLG00000004492	RTCB	100	94.653	ENSPREG00000018467	rtcb	100	94.653	Poecilia_reticulata
ENSHGLG00000004492	RTCB	100	99.802	ENSPPYG00000011752	RTCB	100	99.802	Pongo_abelii
ENSHGLG00000004492	RTCB	93	81.144	ENSPCAG00000013641	RTCB	100	81.144	Procavia_capensis
ENSHGLG00000004492	RTCB	100	99.406	ENSPCOG00000017243	RTCB	100	99.406	Propithecus_coquereli
ENSHGLG00000004492	RTCB	93	98.723	ENSPVAG00000002380	RTCB	100	98.723	Pteropus_vampyrus
ENSHGLG00000004492	RTCB	100	93.069	ENSPNYG00000022760	rtcb	100	93.069	Pundamilia_nyererei
ENSHGLG00000004492	RTCB	100	95.050	ENSPNAG00000009209	rtcb	100	95.050	Pygocentrus_nattereri
ENSHGLG00000004492	RTCB	100	99.208	ENSRNOG00000004813	Rtcb	100	99.208	Rattus_norvegicus
ENSHGLG00000004492	RTCB	100	90.514	ENSRBIG00000042090	RTCB	100	90.514	Rhinopithecus_bieti
ENSHGLG00000004492	RTCB	100	94.455	ENSSBOG00000020085	-	100	94.455	Saimiri_boliviensis_boliviensis
ENSHGLG00000004492	RTCB	94	99.578	ENSSHAG00000016277	RTCB	100	99.578	Sarcophilus_harrisii
ENSHGLG00000004492	RTCB	100	92.871	ENSSFOG00015000763	rtcb	100	92.871	Scleropages_formosus
ENSHGLG00000004492	RTCB	100	93.663	ENSSFOG00015011572	RTCB	100	93.663	Scleropages_formosus
ENSHGLG00000004492	RTCB	100	90.495	ENSSMAG00000005096	rtcb	100	90.495	Scophthalmus_maximus
ENSHGLG00000004492	RTCB	100	93.663	ENSSDUG00000012605	rtcb	100	93.663	Seriola_dumerili
ENSHGLG00000004492	RTCB	100	93.663	ENSSLDG00000019458	rtcb	100	93.663	Seriola_lalandi_dorsalis
ENSHGLG00000004492	RTCB	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSHGLG00000004492	RTCB	100	96.040	ENSSPUG00000012814	RTCB	100	96.040	Sphenodon_punctatus
ENSHGLG00000004492	RTCB	100	94.653	ENSSPAG00000004623	rtcb	100	94.653	Stegastes_partitus
ENSHGLG00000004492	RTCB	100	99.802	ENSSSCG00000000158	RTCB	100	99.802	Sus_scrofa
ENSHGLG00000004492	RTCB	100	97.426	ENSTGUG00000010947	RTCB	99	97.426	Taeniopygia_guttata
ENSHGLG00000004492	RTCB	91	95.435	ENSTRUG00000009880	rtcb	100	95.435	Takifugu_rubripes
ENSHGLG00000004492	RTCB	100	93.267	ENSTNIG00000002484	rtcb	100	93.267	Tetraodon_nigroviridis
ENSHGLG00000004492	RTCB	100	85.941	ENSTBEG00000004418	RTCB	100	85.941	Tupaia_belangeri
ENSHGLG00000004492	RTCB	93	98.723	ENSTTRG00000006417	RTCB	100	98.723	Tursiops_truncatus
ENSHGLG00000004492	RTCB	100	99.604	ENSUAMG00000022792	RTCB	100	99.604	Ursus_americanus
ENSHGLG00000004492	RTCB	100	99.604	ENSUMAG00000017225	RTCB	100	99.604	Ursus_maritimus
ENSHGLG00000004492	RTCB	100	99.604	ENSVPAG00000005375	RTCB	100	99.604	Vicugna_pacos
ENSHGLG00000004492	RTCB	100	99.604	ENSVVUG00000023408	RTCB	100	99.754	Vulpes_vulpes
ENSHGLG00000004492	RTCB	100	94.455	ENSXETG00000011523	rtcb	100	94.455	Xenopus_tropicalis
ENSHGLG00000004492	RTCB	100	94.653	ENSXMAG00000002855	rtcb	100	94.653	Xiphophorus_maculatus