EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000004590 (Gene tree)
Gene ID: -
Gene Symbol: PRDM4
Alias: PFM1
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 21301 bases
Position: chrJH602063.1:2076466-2097766
Accession: 101718300
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000006288	zf-C2H2	PF00096.26	1.9e-18	1	2
ENSHGLP00000006288	zf-C2H2	PF00096.26	1.9e-18	2	2
ENSHGLP00000006288	zf-met	PF12874.7	5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000006367	PRDM4-201	2644	XM_013072250	ENSHGLP00000006288	811 (aa)	XP_012927704	-

Gene Model

Click here to download ENSHGLG00000004590's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000004590's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000004590	PRDM4	98	93.601	ENSG00000110851	PRDM4	95	98.592	Homo_sapiens
ENSHGLG00000004590	PRDM4	98	93.609	ENSAMEG00000016174	PRDM4	99	93.484	Ailuropoda_melanoleuca
ENSHGLG00000004590	PRDM4	98	84.925	ENSAPLG00000009846	PRDM4	99	84.925	Anas_platyrhynchos
ENSHGLG00000004590	PRDM4	98	93.476	ENSANAG00000024800	PRDM4	99	93.726	Aotus_nancymaae
ENSHGLG00000004590	PRDM4	98	93.977	ENSBTAG00000012999	PRDM4	99	94.354	Bos_taurus
ENSHGLG00000004590	PRDM4	98	92.974	ENSCJAG00000015261	PRDM4	99	93.225	Callithrix_jacchus
ENSHGLG00000004590	PRDM4	98	93.601	ENSCAFG00000001788	PRDM4	99	93.977	Canis_familiaris
ENSHGLG00000004590	PRDM4	98	93.601	ENSCAFG00020004916	PRDM4	99	93.977	Canis_lupus_dingo
ENSHGLG00000004590	PRDM4	98	93.350	ENSCHIG00000019409	PRDM4	99	93.726	Capra_hircus
ENSHGLG00000004590	PRDM4	98	93.350	ENSTSYG00000009248	PRDM4	99	93.726	Carlito_syrichta
ENSHGLG00000004590	PRDM4	98	91.000	ENSCAPG00000013937	PRDM4	100	91.000	Cavia_aperea
ENSHGLG00000004590	PRDM4	98	90.435	ENSCPOG00000022385	PRDM4	100	90.435	Cavia_porcellus
ENSHGLG00000004590	PRDM4	98	93.601	ENSCCAG00000036033	PRDM4	99	93.852	Cebus_capucinus
ENSHGLG00000004590	PRDM4	98	93.225	ENSCATG00000044797	PRDM4	99	93.476	Cercocebus_atys
ENSHGLG00000004590	PRDM4	98	92.413	ENSCLAG00000007545	PRDM4	100	92.910	Chinchilla_lanigera
ENSHGLG00000004590	PRDM4	98	93.476	ENSCSAG00000002896	PRDM4	99	93.726	Chlorocebus_sabaeus
ENSHGLG00000004590	PRDM4	70	97.170	ENSCHOG00000001744	PRDM4	82	97.170	Choloepus_hoffmanni
ENSHGLG00000004590	PRDM4	98	86.307	ENSCPBG00000023187	PRDM4	100	86.307	Chrysemys_picta_bellii
ENSHGLG00000004590	PRDM4	98	93.601	ENSCANG00000021804	PRDM4	99	93.852	Colobus_angolensis_palliatus
ENSHGLG00000004590	PRDM4	98	90.411	ENSCGRG00001015102	-	100	90.411	Cricetulus_griseus_chok1gshd
ENSHGLG00000004590	PRDM4	95	90.439	ENSCGRG00000004044	-	100	90.439	Cricetulus_griseus_crigri
ENSHGLG00000004590	PRDM4	98	92.848	ENSDNOG00000032478	PRDM4	99	95.101	Dasypus_novemcinctus
ENSHGLG00000004590	PRDM4	98	80.653	ENSDORG00000015081	-	100	91.558	Dipodomys_ordii
ENSHGLG00000004590	PRDM4	94	44.945	ENSEBUG00000003775	prdm4	99	45.983	Eptatretus_burgeri
ENSHGLG00000004590	PRDM4	98	94.228	ENSECAG00000015423	PRDM4	99	94.605	Equus_caballus
ENSHGLG00000004590	PRDM4	92	90.533	ENSEEUG00000006569	PRDM4	99	90.533	Erinaceus_europaeus
ENSHGLG00000004590	PRDM4	98	59.417	ENSELUG00000015265	prdm4	99	59.781	Esox_lucius
ENSHGLG00000004590	PRDM4	98	93.601	ENSFCAG00000022478	PRDM4	99	93.977	Felis_catus
ENSHGLG00000004590	PRDM4	98	85.553	ENSFALG00000013342	PRDM4	100	85.553	Ficedula_albicollis
ENSHGLG00000004590	PRDM4	98	85.088	ENSGALG00000012619	PRDM4	99	85.088	Gallus_gallus
ENSHGLG00000004590	PRDM4	98	86.055	ENSGAGG00000002763	PRDM4	95	86.055	Gopherus_agassizii
ENSHGLG00000004590	PRDM4	98	93.726	ENSGGOG00000001244	PRDM4	99	93.977	Gorilla_gorilla
ENSHGLG00000004590	PRDM4	98	98.756	ENSHGLG00100007464	PRDM4	100	98.756	Heterocephalus_glaber_male
ENSHGLG00000004590	PRDM4	98	58.415	ENSIPUG00000024162	prdm4	100	58.415	Ictalurus_punctatus
ENSHGLG00000004590	PRDM4	98	93.099	ENSSTOG00000016168	PRDM4	99	93.225	Ictidomys_tridecemlineatus
ENSHGLG00000004590	PRDM4	98	88.302	ENSJJAG00000022448	-	95	93.496	Jaculus_jaculus
ENSHGLG00000004590	PRDM4	98	71.163	ENSLACG00000007452	PRDM4	99	71.411	Latimeria_chalumnae
ENSHGLG00000004590	PRDM4	77	42.480	ENSLOCG00000017092	prdm4	100	52.814	Lepisosteus_oculatus
ENSHGLG00000004590	PRDM4	96	93.528	ENSLAFG00000001483	PRDM4	100	93.909	Loxodonta_africana
ENSHGLG00000004590	PRDM4	98	93.601	ENSMFAG00000041862	PRDM4	99	93.852	Macaca_fascicularis
ENSHGLG00000004590	PRDM4	98	93.601	ENSMMUG00000015550	PRDM4	99	93.852	Macaca_mulatta
ENSHGLG00000004590	PRDM4	98	93.601	ENSMNEG00000032319	PRDM4	99	93.852	Macaca_nemestrina
ENSHGLG00000004590	PRDM4	98	93.476	ENSMLEG00000039607	PRDM4	99	93.726	Mandrillus_leucophaeus
ENSHGLG00000004590	PRDM4	98	77.472	ENSMGAG00000012815	PRDM4	100	77.472	Meleagris_gallopavo
ENSHGLG00000004590	PRDM4	98	92.472	ENSMICG00000007807	PRDM4	99	92.848	Microcebus_murinus
ENSHGLG00000004590	PRDM4	98	91.709	ENSMOCG00000000753	Prdm4	99	91.709	Microtus_ochrogaster
ENSHGLG00000004590	PRDM4	98	91.709	ENSMUSG00000035529	Prdm4	100	91.709	Mus_musculus
ENSHGLG00000004590	PRDM4	98	90.966	MGP_PahariEiJ_G0031398	Prdm4	100	91.105	Mus_pahari
ENSHGLG00000004590	PRDM4	98	91.468	MGP_SPRETEiJ_G0016505	Prdm4	100	91.614	Mus_spretus
ENSHGLG00000004590	PRDM4	98	87.765	ENSMPUG00000012238	PRDM4	99	87.141	Mustela_putorius_furo
ENSHGLG00000004590	PRDM4	98	93.225	ENSMLUG00000000767	PRDM4	99	93.601	Myotis_lucifugus
ENSHGLG00000004590	PRDM4	98	91.970	ENSNGAG00000018627	Prdm4	100	92.346	Nannospalax_galili
ENSHGLG00000004590	PRDM4	98	93.726	ENSNLEG00000006748	PRDM4	99	93.977	Nomascus_leucogenys
ENSHGLG00000004590	PRDM4	88	87.324	ENSMEUG00000004495	PRDM4	89	87.324	Notamacropus_eugenii
ENSHGLG00000004590	PRDM4	87	94.340	ENSOPRG00000010192	PRDM4	89	94.340	Ochotona_princeps
ENSHGLG00000004590	PRDM4	98	90.955	ENSODEG00000014750	PRDM4	99	91.332	Octodon_degus
ENSHGLG00000004590	PRDM4	98	88.206	ENSOANG00000005526	PRDM4	99	88.206	Ornithorhynchus_anatinus
ENSHGLG00000004590	PRDM4	92	96.567	ENSOCUG00000012859	PRDM4	96	96.567	Oryctolagus_cuniculus
ENSHGLG00000004590	PRDM4	98	93.852	ENSOGAG00000011945	PRDM4	100	94.228	Otolemur_garnettii
ENSHGLG00000004590	PRDM4	98	92.974	ENSOARG00000017955	PRDM4	99	93.350	Ovis_aries
ENSHGLG00000004590	PRDM4	98	93.601	ENSPPAG00000038438	PRDM4	99	93.852	Pan_paniscus
ENSHGLG00000004590	PRDM4	98	93.601	ENSPPRG00000004144	PRDM4	99	93.977	Panthera_pardus
ENSHGLG00000004590	PRDM4	98	93.601	ENSPTIG00000005847	PRDM4	99	93.977	Panthera_tigris_altaica
ENSHGLG00000004590	PRDM4	98	93.601	ENSPTRG00000005400	PRDM4	99	93.852	Pan_troglodytes
ENSHGLG00000004590	PRDM4	98	93.601	ENSPANG00000022084	PRDM4	99	93.852	Papio_anubis
ENSHGLG00000004590	PRDM4	98	59.334	ENSPKIG00000000875	prdm4	99	59.572	Paramormyrops_kingsleyae
ENSHGLG00000004590	PRDM4	90	79.227	ENSPSIG00000012066	PRDM4	100	79.227	Pelodiscus_sinensis
ENSHGLG00000004590	PRDM4	99	91.646	ENSPEMG00000014598	Prdm4	100	92.095	Peromyscus_maniculatus_bairdii
ENSHGLG00000004590	PRDM4	98	87.750	ENSPCIG00000009471	PRDM4	99	87.750	Phascolarctos_cinereus
ENSHGLG00000004590	PRDM4	98	93.476	ENSPPYG00000004913	PRDM4	99	93.726	Pongo_abelii
ENSHGLG00000004590	PRDM4	82	93.182	ENSPCAG00000009987	PRDM4	83	93.182	Procavia_capensis
ENSHGLG00000004590	PRDM4	98	92.472	ENSPCOG00000021060	PRDM4	99	92.848	Propithecus_coquereli
ENSHGLG00000004590	PRDM4	98	92.982	ENSPVAG00000001596	PRDM4	99	93.358	Pteropus_vampyrus
ENSHGLG00000004590	PRDM4	98	91.980	ENSRNOG00000004962	Prdm4	100	92.105	Rattus_norvegicus
ENSHGLG00000004590	PRDM4	98	93.601	ENSRBIG00000035488	PRDM4	99	93.852	Rhinopithecus_bieti
ENSHGLG00000004590	PRDM4	98	93.726	ENSRROG00000012779	PRDM4	99	93.977	Rhinopithecus_roxellana
ENSHGLG00000004590	PRDM4	98	93.476	ENSSBOG00000000403	PRDM4	99	93.726	Saimiri_boliviensis_boliviensis
ENSHGLG00000004590	PRDM4	98	62.776	ENSSFOG00015023358	prdm4	99	62.899	Scleropages_formosus
ENSHGLG00000004590	PRDM4	98	94.103	ENSSSCG00000000160	PRDM4	99	94.228	Sus_scrofa
ENSHGLG00000004590	PRDM4	98	85.678	ENSTGUG00000010962	-	99	85.678	Taeniopygia_guttata
ENSHGLG00000004590	PRDM4	72	88.225	ENSTBEG00000001732	PRDM4	84	88.225	Tupaia_belangeri
ENSHGLG00000004590	PRDM4	98	93.977	ENSTTRG00000011056	PRDM4	99	94.354	Tursiops_truncatus
ENSHGLG00000004590	PRDM4	98	93.476	ENSUAMG00000022796	PRDM4	99	93.852	Ursus_americanus
ENSHGLG00000004590	PRDM4	98	93.476	ENSUMAG00000017231	PRDM4	99	93.852	Ursus_maritimus
ENSHGLG00000004590	PRDM4	98	93.601	ENSVPAG00000002215	PRDM4	100	93.726	Vicugna_pacos
ENSHGLG00000004590	PRDM4	98	93.601	ENSVVUG00000023397	PRDM4	99	93.977	Vulpes_vulpes