EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000004907 (Gene tree)
Gene ID: -
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 67320 bases
Position: chrJH602058.1:20648230-20715549
Accession: 101716456
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000006718	Npa1	PF11707.8	1.1e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000006801	URB1-201	6915	XM_013071288	ENSHGLP00000006718	2304 (aa)	XP_012926742	-

Gene Model

Click here to download ENSHGLG00000004907's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000004907's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000004907	URB1	99	79.774	ENSG00000142207	URB1	99	79.671	Homo_sapiens
ENSHGLG00000004907	URB1	99	41.577	ENSAPOG00000020308	urb1	99	41.749	Acanthochromis_polyacanthus
ENSHGLG00000004907	URB1	99	76.723	ENSAMEG00000011998	URB1	99	76.810	Ailuropoda_melanoleuca
ENSHGLG00000004907	URB1	95	43.045	ENSACIG00000003248	urb1	97	42.909	Amphilophus_citrinellus
ENSHGLG00000004907	URB1	99	39.974	ENSAOCG00000010364	urb1	99	40.146	Amphiprion_ocellaris
ENSHGLG00000004907	URB1	97	50.154	ENSAPEG00000010758	urb1	99	50.154	Amphiprion_percula
ENSHGLG00000004907	URB1	98	43.651	ENSATEG00000011790	urb1	97	43.695	Anabas_testudineus
ENSHGLG00000004907	URB1	97	54.856	ENSAPLG00000012791	URB1	100	54.945	Anas_platyrhynchos
ENSHGLG00000004907	URB1	98	51.965	ENSACAG00000002817	URB1	98	51.915	Anolis_carolinensis
ENSHGLG00000004907	URB1	99	78.683	ENSANAG00000024617	URB1	99	78.683	Aotus_nancymaae
ENSHGLG00000004907	URB1	99	43.540	ENSACLG00000024865	urb1	99	43.546	Astatotilapia_calliptera
ENSHGLG00000004907	URB1	98	39.037	ENSAMXG00000012306	urb1	99	38.738	Astyanax_mexicanus
ENSHGLG00000004907	URB1	100	73.348	ENSBTAG00000012412	URB1	100	73.434	Bos_taurus
ENSHGLG00000004907	URB1	99	78.321	ENSCJAG00000009118	URB1	99	78.321	Callithrix_jacchus
ENSHGLG00000004907	URB1	99	76.750	ENSCAFG00000008892	URB1	99	76.750	Canis_familiaris
ENSHGLG00000004907	URB1	99	75.553	ENSCAFG00020025994	-	99	75.553	Canis_lupus_dingo
ENSHGLG00000004907	URB1	99	76.593	ENSCAFG00020025987	-	99	76.593	Canis_lupus_dingo
ENSHGLG00000004907	URB1	99	73.077	ENSCHIG00000015645	URB1	99	73.163	Capra_hircus
ENSHGLG00000004907	URB1	99	78.751	ENSTSYG00000013286	URB1	99	78.751	Carlito_syrichta
ENSHGLG00000004907	URB1	98	83.415	ENSCAPG00000015589	URB1	99	83.415	Cavia_aperea
ENSHGLG00000004907	URB1	99	84.846	ENSCPOG00000006748	URB1	99	84.846	Cavia_porcellus
ENSHGLG00000004907	URB1	99	78.717	ENSCCAG00000021299	URB1	99	78.717	Cebus_capucinus
ENSHGLG00000004907	URB1	99	79.064	ENSCATG00000042630	URB1	99	79.064	Cercocebus_atys
ENSHGLG00000004907	URB1	99	86.099	ENSCLAG00000005262	URB1	99	86.099	Chinchilla_lanigera
ENSHGLG00000004907	URB1	99	77.514	ENSCSAG00000009584	URB1	99	77.514	Chlorocebus_sabaeus
ENSHGLG00000004907	URB1	99	56.989	ENSCPBG00000006454	URB1	99	57.032	Chrysemys_picta_bellii
ENSHGLG00000004907	URB1	99	79.194	ENSCANG00000031088	URB1	99	79.194	Colobus_angolensis_palliatus
ENSHGLG00000004907	URB1	99	74.879	ENSCGRG00001010616	Urb1	100	74.718	Cricetulus_griseus_chok1gshd
ENSHGLG00000004907	URB1	98	74.435	ENSCGRG00000015840	Urb1	100	74.435	Cricetulus_griseus_crigri
ENSHGLG00000004907	URB1	99	41.584	ENSCSEG00000012616	urb1	99	41.714	Cynoglossus_semilaevis
ENSHGLG00000004907	URB1	92	52.941	ENSCVAG00000009076	urb1	99	51.434	Cyprinodon_variegatus
ENSHGLG00000004907	URB1	99	43.091	ENSDARG00000060308	urb1	99	43.120	Danio_rerio
ENSHGLG00000004907	URB1	85	75.864	ENSDNOG00000015586	URB1	99	75.864	Dasypus_novemcinctus
ENSHGLG00000004907	URB1	99	78.454	ENSDORG00000006735	Urb1	99	78.454	Dipodomys_ordii
ENSHGLG00000004907	URB1	91	79.450	ENSETEG00000009080	URB1	92	79.450	Echinops_telfairi
ENSHGLG00000004907	URB1	99	77.080	ENSEASG00005007711	URB1	99	77.080	Equus_asinus_asinus
ENSHGLG00000004907	URB1	97	84.607	ENSECAG00000013206	URB1	99	84.607	Equus_caballus
ENSHGLG00000004907	URB1	58	83.817	ENSEEUG00000003626	-	58	83.817	Erinaceus_europaeus
ENSHGLG00000004907	URB1	99	44.096	ENSELUG00000020516	urb1	99	44.125	Esox_lucius
ENSHGLG00000004907	URB1	99	76.465	ENSFCAG00000002177	URB1	99	76.465	Felis_catus
ENSHGLG00000004907	URB1	98	49.935	ENSFALG00000004636	URB1	99	50.131	Ficedula_albicollis
ENSHGLG00000004907	URB1	99	88.325	ENSFDAG00000007288	URB1	95	88.325	Fukomys_damarensis
ENSHGLG00000004907	URB1	99	41.501	ENSFHEG00000000202	urb1	99	42.209	Fundulus_heteroclitus
ENSHGLG00000004907	URB1	92	45.431	ENSGMOG00000001838	urb1	93	45.431	Gadus_morhua
ENSHGLG00000004907	URB1	99	55.076	ENSGALG00000015887	URB1	99	54.946	Gallus_gallus
ENSHGLG00000004907	URB1	94	50.205	ENSGAFG00000020694	urb1	98	50.205	Gambusia_affinis
ENSHGLG00000004907	URB1	99	43.296	ENSGACG00000011703	urb1	99	43.296	Gasterosteus_aculeatus
ENSHGLG00000004907	URB1	99	56.664	ENSGAGG00000022544	URB1	99	56.664	Gopherus_agassizii
ENSHGLG00000004907	URB1	99	79.627	ENSGGOG00000000285	URB1	99	79.627	Gorilla_gorilla
ENSHGLG00000004907	URB1	99	43.626	ENSHBUG00000001904	urb1	99	43.632	Haplochromis_burtoni
ENSHGLG00000004907	URB1	100	97.831	ENSHGLG00100010749	URB1	100	97.831	Heterocephalus_glaber_male
ENSHGLG00000004907	URB1	70	51.946	ENSHCOG00000018683	urb1	97	52.529	Hippocampus_comes
ENSHGLG00000004907	URB1	99	39.870	ENSIPUG00000014721	urb1	99	39.974	Ictalurus_punctatus
ENSHGLG00000004907	URB1	99	80.113	ENSSTOG00000004539	URB1	99	80.113	Ictidomys_tridecemlineatus
ENSHGLG00000004907	URB1	96	44.738	ENSKMAG00000006001	urb1	98	46.610	Kryptolebias_marmoratus
ENSHGLG00000004907	URB1	94	48.318	ENSLBEG00000027208	urb1	99	48.318	Labrus_bergylta
ENSHGLG00000004907	URB1	99	47.548	ENSLACG00000017059	URB1	99	47.593	Latimeria_chalumnae
ENSHGLG00000004907	URB1	99	45.126	ENSLOCG00000009190	urb1	99	45.060	Lepisosteus_oculatus
ENSHGLG00000004907	URB1	99	74.675	ENSLAFG00000010407	URB1	99	74.675	Loxodonta_africana
ENSHGLG00000004907	URB1	99	78.977	ENSMFAG00000034391	URB1	97	78.977	Macaca_fascicularis
ENSHGLG00000004907	URB1	99	78.804	ENSMMUG00000010295	URB1	99	78.804	Macaca_mulatta
ENSHGLG00000004907	URB1	99	77.677	ENSMNEG00000032981	URB1	99	77.677	Macaca_nemestrina
ENSHGLG00000004907	URB1	99	79.150	ENSMLEG00000041435	URB1	99	79.150	Mandrillus_leucophaeus
ENSHGLG00000004907	URB1	99	42.654	ENSMAMG00000011238	urb1	99	42.654	Mastacembelus_armatus
ENSHGLG00000004907	URB1	99	39.298	ENSMZEG00005011862	urb1	99	39.307	Maylandia_zebra
ENSHGLG00000004907	URB1	98	55.390	ENSMGAG00000014512	URB1	99	55.259	Meleagris_gallopavo
ENSHGLG00000004907	URB1	93	75.793	ENSMAUG00000010516	Urb1	100	75.279	Mesocricetus_auratus
ENSHGLG00000004907	URB1	100	78.163	ENSMICG00000016424	URB1	100	78.163	Microcebus_murinus
ENSHGLG00000004907	URB1	99	72.917	ENSMOCG00000012613	Urb1	99	72.917	Microtus_ochrogaster
ENSHGLG00000004907	URB1	99	61.538	ENSMODG00000021076	URB1	99	61.538	Monodelphis_domestica
ENSHGLG00000004907	URB1	97	49.898	ENSMALG00000017411	urb1	99	49.898	Monopterus_albus
ENSHGLG00000004907	URB1	99	74.143	MGP_CAROLIEiJ_G0020948	Urb1	99	74.143	Mus_caroli
ENSHGLG00000004907	URB1	99	74.187	ENSMUSG00000039929	Urb1	99	74.187	Mus_musculus
ENSHGLG00000004907	URB1	99	74.273	MGP_PahariEiJ_G0016653	Urb1	99	74.273	Mus_pahari
ENSHGLG00000004907	URB1	99	74.262	MGP_SPRETEiJ_G0021854	Urb1	99	74.262	Mus_spretus
ENSHGLG00000004907	URB1	99	76.586	ENSMPUG00000001123	URB1	99	76.586	Mustela_putorius_furo
ENSHGLG00000004907	URB1	99	75.554	ENSNGAG00000001905	Urb1	99	75.554	Nannospalax_galili
ENSHGLG00000004907	URB1	82	44.527	ENSNBRG00000001049	urb1	99	44.594	Neolamprologus_brichardi
ENSHGLG00000004907	URB1	99	77.599	ENSNLEG00000026872	URB1	99	77.503	Nomascus_leucogenys
ENSHGLG00000004907	URB1	92	66.157	ENSMEUG00000010828	URB1	94	65.725	Notamacropus_eugenii
ENSHGLG00000004907	URB1	99	71.453	ENSOPRG00000013482	URB1	100	71.453	Ochotona_princeps
ENSHGLG00000004907	URB1	99	84.455	ENSODEG00000002587	URB1	99	84.455	Octodon_degus
ENSHGLG00000004907	URB1	99	43.798	ENSONIG00000005599	urb1	100	43.798	Oreochromis_niloticus
ENSHGLG00000004907	URB1	99	77.826	ENSOCUG00000009381	URB1	99	77.826	Oryctolagus_cuniculus
ENSHGLG00000004907	URB1	99	42.771	ENSORLG00000003429	urb1	99	42.685	Oryzias_latipes
ENSHGLG00000004907	URB1	99	42.673	ENSORLG00020013785	urb1	99	42.673	Oryzias_latipes_hni
ENSHGLG00000004907	URB1	95	45.242	ENSORLG00015019421	urb1	98	45.242	Oryzias_latipes_hsok
ENSHGLG00000004907	URB1	78	54.563	ENSOMEG00000002094	urb1	98	54.890	Oryzias_melastigma
ENSHGLG00000004907	URB1	99	77.927	ENSOGAG00000017140	URB1	100	77.927	Otolemur_garnettii
ENSHGLG00000004907	URB1	97	73.048	ENSOARG00000013679	URB1	99	72.966	Ovis_aries
ENSHGLG00000004907	URB1	99	79.887	ENSPPAG00000003423	URB1	99	79.887	Pan_paniscus
ENSHGLG00000004907	URB1	99	76.596	ENSPPRG00000023131	URB1	99	76.596	Panthera_pardus
ENSHGLG00000004907	URB1	92	75.157	ENSPTIG00000016125	URB1	97	75.146	Panthera_tigris_altaica
ENSHGLG00000004907	URB1	99	79.757	ENSPTRG00000013852	URB1	99	79.757	Pan_troglodytes
ENSHGLG00000004907	URB1	99	79.237	ENSPANG00000021964	URB1	99	79.237	Papio_anubis
ENSHGLG00000004907	URB1	99	46.127	ENSPKIG00000003683	urb1	98	46.127	Paramormyrops_kingsleyae
ENSHGLG00000004907	URB1	99	74.294	ENSPEMG00000021205	Urb1	99	74.359	Peromyscus_maniculatus_bairdii
ENSHGLG00000004907	URB1	71	35.191	ENSPMAG00000009733	URB1	99	33.103	Petromyzon_marinus
ENSHGLG00000004907	URB1	99	61.366	ENSPCIG00000016350	URB1	99	61.740	Phascolarctos_cinereus
ENSHGLG00000004907	URB1	96	42.493	ENSPLAG00000004371	urb1	99	42.493	Poecilia_latipinna
ENSHGLG00000004907	URB1	99	43.030	ENSPMEG00000006634	urb1	99	43.030	Poecilia_mexicana
ENSHGLG00000004907	URB1	99	42.882	ENSPREG00000013453	urb1	99	42.882	Poecilia_reticulata
ENSHGLG00000004907	URB1	99	79.252	ENSPPYG00000011359	URB1	99	79.150	Pongo_abelii
ENSHGLG00000004907	URB1	99	64.655	ENSPCAG00000007430	URB1	99	64.655	Procavia_capensis
ENSHGLG00000004907	URB1	99	78.838	ENSPCOG00000022695	URB1	99	78.838	Propithecus_coquereli
ENSHGLG00000004907	URB1	99	75.553	ENSPVAG00000000889	URB1	99	75.553	Pteropus_vampyrus
ENSHGLG00000004907	URB1	99	42.396	ENSPNYG00000010589	urb1	99	42.402	Pundamilia_nyererei
ENSHGLG00000004907	URB1	99	39.158	ENSPNAG00000019324	urb1	99	39.386	Pygocentrus_nattereri
ENSHGLG00000004907	URB1	99	74.111	ENSRNOG00000002080	Urb1	99	74.241	Rattus_norvegicus
ENSHGLG00000004907	URB1	99	78.813	ENSRBIG00000033122	URB1	99	78.813	Rhinopithecus_bieti
ENSHGLG00000004907	URB1	99	78.899	ENSRROG00000040237	URB1	99	78.899	Rhinopithecus_roxellana
ENSHGLG00000004907	URB1	99	78.596	ENSSBOG00000027672	URB1	99	78.596	Saimiri_boliviensis_boliviensis
ENSHGLG00000004907	URB1	99	60.991	ENSSHAG00000005140	URB1	99	61.034	Sarcophilus_harrisii
ENSHGLG00000004907	URB1	93	45.450	ENSSFOG00015000339	urb1	99	45.539	Scleropages_formosus
ENSHGLG00000004907	URB1	99	42.611	ENSSMAG00000003782	urb1	99	42.716	Scophthalmus_maximus
ENSHGLG00000004907	URB1	99	43.454	ENSSDUG00000012313	urb1	99	43.454	Seriola_dumerili
ENSHGLG00000004907	URB1	99	43.325	ENSSLDG00000023179	urb1	99	43.325	Seriola_lalandi_dorsalis
ENSHGLG00000004907	URB1	99	53.262	ENSSPUG00000012447	URB1	99	53.219	Sphenodon_punctatus
ENSHGLG00000004907	URB1	99	42.980	ENSSPAG00000006325	urb1	99	43.152	Stegastes_partitus
ENSHGLG00000004907	URB1	99	75.087	ENSSSCG00000032024	URB1	99	74.957	Sus_scrofa
ENSHGLG00000004907	URB1	74	56.583	ENSTGUG00000013442	URB1	100	56.583	Taeniopygia_guttata
ENSHGLG00000004907	URB1	99	42.759	ENSTRUG00000009372	urb1	99	42.538	Takifugu_rubripes
ENSHGLG00000004907	URB1	99	42.199	ENSTNIG00000016277	urb1	100	42.055	Tetraodon_nigroviridis
ENSHGLG00000004907	URB1	78	80.636	ENSTBEG00000010044	URB1	79	80.636	Tupaia_belangeri
ENSHGLG00000004907	URB1	91	75.126	ENSTTRG00000007712	URB1	92	75.329	Tursiops_truncatus
ENSHGLG00000004907	URB1	99	76.863	ENSUAMG00000012231	URB1	99	76.863	Ursus_americanus
ENSHGLG00000004907	URB1	94	76.901	ENSUMAG00000017419	URB1	97	81.148	Ursus_maritimus
ENSHGLG00000004907	URB1	67	88.095	ENSVPAG00000001164	URB1	68	88.095	Vicugna_pacos
ENSHGLG00000004907	URB1	99	76.223	ENSVVUG00000000551	URB1	99	76.223	Vulpes_vulpes
ENSHGLG00000004907	URB1	99	48.686	ENSXETG00000009895	urb1	99	48.644	Xenopus_tropicalis
ENSHGLG00000004907	URB1	99	40.960	ENSXCOG00000005500	urb1	96	45.053	Xiphophorus_couchianus
ENSHGLG00000004907	URB1	99	40.830	ENSXMAG00000007253	urb1	96	45.003	Xiphophorus_maculatus