EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000004968 (Gene tree)
Gene ID: -
Gene Symbol: RRP1B
Alias: KIAA0179|Nnp1|PPP1R136|RRP1
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 22033 bases
Position: chrJH602058.1:27365141-27387173
Accession: 101698323
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000006807	Nop52	PF05997.12	3.3e-68	1	1
ENSHGLP00000006806	Nop52	PF05997.12	3.8e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000006889	RRP1B-201	2190	XM_004842403	ENSHGLP00000006806	729 (aa)	XP_004842460	UPI00034F2779
ENSHGLT00000006890	RRP1B-202	2053	XM_013071331	ENSHGLP00000006807	674 (aa)	XP_012926785	UPI0006573912

Gene Model

Click here to download ENSHGLG00000004968's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000004968's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000004968	RRP1B	61	46.207	ENSG00000160214	RRP1	78	65.714	Homo_sapiens
ENSHGLG00000004968	RRP1B	100	65.177	ENSG00000160208	RRP1B	99	64.529	Homo_sapiens
ENSHGLG00000004968	RRP1B	66	45.669	ENSAPOG00000007490	-	50	45.669	Acanthochromis_polyacanthus
ENSHGLG00000004968	RRP1B	71	73.282	ENSAMEG00000011401	RRP1B	70	73.282	Ailuropoda_melanoleuca
ENSHGLG00000004968	RRP1B	57	47.804	ENSAMEG00000011448	RRP1	82	47.804	Ailuropoda_melanoleuca
ENSHGLG00000004968	RRP1B	59	50.000	ENSAOCG00000017894	-	98	49.315	Amphiprion_ocellaris
ENSHGLG00000004968	RRP1B	64	44.094	ENSAPEG00000024150	-	53	46.457	Amphiprion_percula
ENSHGLG00000004968	RRP1B	55	49.067	ENSANAG00000037815	RRP1	82	49.468	Aotus_nancymaae
ENSHGLG00000004968	RRP1B	100	63.922	ENSANAG00000034889	RRP1B	99	63.696	Aotus_nancymaae
ENSHGLG00000004968	RRP1B	100	57.390	ENSBTAG00000017418	RRP1B	99	57.708	Bos_taurus
ENSHGLG00000004968	RRP1B	100	62.402	ENSCJAG00000017077	RRP1B	99	61.911	Callithrix_jacchus
ENSHGLG00000004968	RRP1B	53	49.863	ENSCJAG00000043205	RRP1	73	49.863	Callithrix_jacchus
ENSHGLG00000004968	RRP1B	95	60.615	ENSCAFG00000010621	RRP1B	99	61.453	Canis_familiaris
ENSHGLG00000004968	RRP1B	55	58.120	ENSCAFG00000010646	RRP1	84	44.030	Canis_familiaris
ENSHGLG00000004968	RRP1B	62	46.445	ENSCAFG00020018979	RRP1	78	49.030	Canis_lupus_dingo
ENSHGLG00000004968	RRP1B	100	62.051	ENSCAFG00020018901	RRP1B	99	62.184	Canis_lupus_dingo
ENSHGLG00000004968	RRP1B	100	58.411	ENSCHIG00000021519	RRP1B	99	57.067	Capra_hircus
ENSHGLG00000004968	RRP1B	100	75.443	ENSCPOG00000002396	RRP1B	99	74.761	Cavia_porcellus
ENSHGLG00000004968	RRP1B	55	47.990	ENSCCAG00000029828	RRP1	83	47.990	Cebus_capucinus
ENSHGLG00000004968	RRP1B	100	64.099	ENSCCAG00000029384	RRP1B	99	63.743	Cebus_capucinus
ENSHGLG00000004968	RRP1B	100	64.491	ENSCATG00000017423	RRP1B	99	64.136	Cercocebus_atys
ENSHGLG00000004968	RRP1B	100	76.295	ENSCLAG00000005622	RRP1B	99	76.295	Chinchilla_lanigera
ENSHGLG00000004968	RRP1B	53	48.352	ENSCLAG00000011639	RRP1	79	48.352	Chinchilla_lanigera
ENSHGLG00000004968	RRP1B	100	64.798	ENSCSAG00000007961	RRP1B	99	64.444	Chlorocebus_sabaeus
ENSHGLG00000004968	RRP1B	58	32.750	ENSCING00000003304	-	78	33.425	Ciona_intestinalis
ENSHGLG00000004968	RRP1B	100	64.928	ENSCANG00000040952	RRP1B	99	64.575	Colobus_angolensis_palliatus
ENSHGLG00000004968	RRP1B	100	61.518	ENSCGRG00001023882	-	99	61.119	Cricetulus_griseus_chok1gshd
ENSHGLG00000004968	RRP1B	100	61.753	ENSCGRG00001010889	-	99	61.355	Cricetulus_griseus_chok1gshd
ENSHGLG00000004968	RRP1B	61	44.762	ENSCGRG00001011920	Rrp1	81	47.945	Cricetulus_griseus_chok1gshd
ENSHGLG00000004968	RRP1B	61	44.762	ENSCGRG00000008915	Rrp1	81	47.945	Cricetulus_griseus_crigri
ENSHGLG00000004968	RRP1B	95	60.504	ENSCGRG00000001553	Rrp1b	97	60.000	Cricetulus_griseus_crigri
ENSHGLG00000004968	RRP1B	59	52.273	ENSCSEG00000020711	-	77	52.273	Cynoglossus_semilaevis
ENSHGLG00000004968	RRP1B	53	40.771	ENSCVAG00000017568	-	93	40.591	Cyprinodon_variegatus
ENSHGLG00000004968	RRP1B	65	47.153	ENSDNOG00000019880	RRP1	79	52.486	Dasypus_novemcinctus
ENSHGLG00000004968	RRP1B	100	59.079	ENSDNOG00000032774	RRP1B	51	72.727	Dasypus_novemcinctus
ENSHGLG00000004968	RRP1B	94	54.443	ENSDORG00000005496	Rrp1b	100	56.073	Dipodomys_ordii
ENSHGLG00000004968	RRP1B	93	78.824	ENSETEG00000019489	RRP1B	93	78.824	Echinops_telfairi
ENSHGLG00000004968	RRP1B	61	45.498	ENSEASG00005001673	RRP1	84	48.072	Equus_asinus_asinus
ENSHGLG00000004968	RRP1B	100	63.660	ENSEASG00005001687	RRP1B	99	62.336	Equus_asinus_asinus
ENSHGLG00000004968	RRP1B	100	63.158	ENSECAG00000018018	RRP1B	99	62.073	Equus_caballus
ENSHGLG00000004968	RRP1B	61	44.575	ENSECAG00000015703	RRP1	84	47.558	Equus_caballus
ENSHGLG00000004968	RRP1B	65	50.833	ENSELUG00000015885	-	93	42.775	Esox_lucius
ENSHGLG00000004968	RRP1B	100	62.769	ENSFCAG00000010272	RRP1B	99	62.399	Felis_catus
ENSHGLG00000004968	RRP1B	61	47.101	ENSFCAG00000008434	RRP1	82	48.843	Felis_catus
ENSHGLG00000004968	RRP1B	96	78.501	ENSFDAG00000010899	RRP1B	96	78.501	Fukomys_damarensis
ENSHGLG00000004968	RRP1B	53	47.778	ENSFDAG00000013728	RRP1	79	47.354	Fukomys_damarensis
ENSHGLG00000004968	RRP1B	56	48.421	ENSFHEG00000016314	-	52	48.421	Fundulus_heteroclitus
ENSHGLG00000004968	RRP1B	64	50.943	ENSGMOG00000001953	-	67	50.943	Gadus_morhua
ENSHGLG00000004968	RRP1B	65	49.573	ENSGACG00000001438	rrp1	72	48.333	Gasterosteus_aculeatus
ENSHGLG00000004968	RRP1B	61	46.207	ENSGGOG00000000173	RRP1	82	48.974	Gorilla_gorilla
ENSHGLG00000004968	RRP1B	100	64.791	ENSGGOG00000012069	RRP1B	99	64.529	Gorilla_gorilla
ENSHGLG00000004968	RRP1B	55	43.455	ENSHBUG00000003766	-	50	42.677	Haplochromis_burtoni
ENSHGLG00000004968	RRP1B	93	92.105	ENSHGLG00100002232	RRP1B	99	92.105	Heterocephalus_glaber_male
ENSHGLG00000004968	RRP1B	68	42.763	ENSHCOG00000018388	-	62	42.763	Hippocampus_comes
ENSHGLG00000004968	RRP1B	63	42.735	ENSIPUG00000000673	-	72	41.470	Ictalurus_punctatus
ENSHGLG00000004968	RRP1B	99	67.292	ENSSTOG00000011790	RRP1B	96	67.333	Ictidomys_tridecemlineatus
ENSHGLG00000004968	RRP1B	60	45.521	ENSSTOG00000011116	RRP1	87	46.770	Ictidomys_tridecemlineatus
ENSHGLG00000004968	RRP1B	100	56.901	ENSJJAG00000021279	Rrp1b	99	57.180	Jaculus_jaculus
ENSHGLG00000004968	RRP1B	61	45.902	ENSKMAG00000005539	rrp1	78	47.200	Kryptolebias_marmoratus
ENSHGLG00000004968	RRP1B	51	39.889	ENSLBEG00000021417	RRP1	94	41.114	Labrus_bergylta
ENSHGLG00000004968	RRP1B	55	50.000	ENSLACG00000017332	-	51	50.000	Latimeria_chalumnae
ENSHGLG00000004968	RRP1B	64	52.459	ENSLOCG00000004064	-	51	44.882	Lepisosteus_oculatus
ENSHGLG00000004968	RRP1B	54	48.533	ENSLAFG00000022901	RRP1	82	48.533	Loxodonta_africana
ENSHGLG00000004968	RRP1B	88	55.685	ENSLAFG00000000766	RRP1B	89	72.368	Loxodonta_africana
ENSHGLG00000004968	RRP1B	100	64.360	ENSMFAG00000039152	RRP1B	99	64.005	Macaca_fascicularis
ENSHGLG00000004968	RRP1B	100	62.484	ENSMMUG00000000104	RRP1B	99	62.123	Macaca_mulatta
ENSHGLG00000004968	RRP1B	100	64.230	ENSMNEG00000034269	RRP1B	99	63.874	Macaca_nemestrina
ENSHGLG00000004968	RRP1B	95	63.187	ENSMLEG00000040044	RRP1B	99	62.810	Mandrillus_leucophaeus
ENSHGLG00000004968	RRP1B	57	43.781	ENSMLEG00000037797	RRP1	77	48.048	Mandrillus_leucophaeus
ENSHGLG00000004968	RRP1B	100	59.893	ENSMAUG00000021508	Rrp1b	99	60.428	Mesocricetus_auratus
ENSHGLG00000004968	RRP1B	59	45.926	ENSMICG00000004700	RRP1	88	46.465	Microcebus_murinus
ENSHGLG00000004968	RRP1B	100	66.667	ENSMICG00000004686	RRP1B	99	66.446	Microcebus_murinus
ENSHGLG00000004968	RRP1B	65	37.728	ENSMOCG00000015687	Rrp1	86	40.714	Microtus_ochrogaster
ENSHGLG00000004968	RRP1B	100	58.933	ENSMOCG00000001117	Rrp1b	99	58.667	Microtus_ochrogaster
ENSHGLG00000004968	RRP1B	53	36.314	ENSMMOG00000019175	rrp1	96	36.883	Mola_mola
ENSHGLG00000004968	RRP1B	100	57.199	ENSMODG00000021033	RRP1B	99	56.545	Monodelphis_domestica
ENSHGLG00000004968	RRP1B	56	42.632	ENSMALG00000010310	rrp1	97	42.632	Monopterus_albus
ENSHGLG00000004968	RRP1B	100	59.176	MGP_CAROLIEiJ_G0021376	Rrp1b	99	59.279	Mus_caroli
ENSHGLG00000004968	RRP1B	60	53.947	MGP_CAROLIEiJ_G0015508	Rrp1	72	53.947	Mus_caroli
ENSHGLG00000004968	RRP1B	60	53.947	ENSMUSG00000061032	Rrp1	83	40.238	Mus_musculus
ENSHGLG00000004968	RRP1B	100	59.230	ENSMUSG00000058392	Rrp1b	99	58.964	Mus_musculus
ENSHGLG00000004968	RRP1B	100	59.813	MGP_PahariEiJ_G0023695	Rrp1b	99	58.886	Mus_pahari
ENSHGLG00000004968	RRP1B	57	54.386	MGP_PahariEiJ_G0030921	Rrp1	58	46.980	Mus_pahari
ENSHGLG00000004968	RRP1B	100	58.964	MGP_SPRETEiJ_G0022290	Rrp1b	99	58.933	Mus_spretus
ENSHGLG00000004968	RRP1B	56	53.947	MGP_SPRETEiJ_G0016321	Rrp1	83	39.762	Mus_spretus
ENSHGLG00000004968	RRP1B	54	43.885	ENSMPUG00000009826	RRP1	78	45.573	Mustela_putorius_furo
ENSHGLG00000004968	RRP1B	91	56.714	ENSMPUG00000009810	RRP1B	99	56.688	Mustela_putorius_furo
ENSHGLG00000004968	RRP1B	50	59.633	ENSMLUG00000017788	RRP1	82	44.337	Myotis_lucifugus
ENSHGLG00000004968	RRP1B	100	63.021	ENSMLUG00000007738	RRP1B	99	63.206	Myotis_lucifugus
ENSHGLG00000004968	RRP1B	100	60.776	ENSNGAG00000021073	Rrp1b	99	60.509	Nannospalax_galili
ENSHGLG00000004968	RRP1B	100	63.325	ENSNLEG00000001490	RRP1B	99	63.648	Nomascus_leucogenys
ENSHGLG00000004968	RRP1B	61	46.347	ENSNLEG00000034734	RRP1	77	50.820	Nomascus_leucogenys
ENSHGLG00000004968	RRP1B	64	83.478	ENSMEUG00000003226	-	79	83.478	Notamacropus_eugenii
ENSHGLG00000004968	RRP1B	53	43.611	ENSOPRG00000001319	RRP1	98	44.167	Ochotona_princeps
ENSHGLG00000004968	RRP1B	100	71.156	ENSODEG00000013177	RRP1B	99	71.156	Octodon_degus
ENSHGLG00000004968	RRP1B	99	47.539	ENSOANG00000006470	RRP1B	51	58.205	Ornithorhynchus_anatinus
ENSHGLG00000004968	RRP1B	50	55.000	ENSOANG00000006472	-	99	48.248	Ornithorhynchus_anatinus
ENSHGLG00000004968	RRP1B	65	43.784	ENSORLG00020007199	-	55	50.538	Oryzias_latipes_hni
ENSHGLG00000004968	RRP1B	65	45.968	ENSORLG00015004425	-	55	44.961	Oryzias_latipes_hsok
ENSHGLG00000004968	RRP1B	60	53.488	ENSOMEG00000016910	-	56	53.488	Oryzias_melastigma
ENSHGLG00000004968	RRP1B	81	68.852	ENSOGAG00000009872	RRP1B	85	67.661	Otolemur_garnettii
ENSHGLG00000004968	RRP1B	54	47.849	ENSOGAG00000006105	RRP1	82	48.248	Otolemur_garnettii
ENSHGLG00000004968	RRP1B	95	57.024	ENSOARG00000011314	RRP1B	100	55.756	Ovis_aries
ENSHGLG00000004968	RRP1B	61	46.207	ENSPPAG00000029050	RRP1	82	48.974	Pan_paniscus
ENSHGLG00000004968	RRP1B	95	63.573	ENSPPAG00000035319	RRP1B	99	62.948	Pan_paniscus
ENSHGLG00000004968	RRP1B	61	46.359	ENSPPRG00000010656	RRP1	88	46.489	Panthera_pardus
ENSHGLG00000004968	RRP1B	100	61.342	ENSPPRG00000010356	RRP1B	99	60.748	Panthera_pardus
ENSHGLG00000004968	RRP1B	70	73.228	ENSPTIG00000016894	RRP1B	91	74.016	Panthera_tigris_altaica
ENSHGLG00000004968	RRP1B	56	43.005	ENSPTIG00000019473	RRP1	79	44.944	Panthera_tigris_altaica
ENSHGLG00000004968	RRP1B	100	64.783	ENSPTRG00000013958	RRP1B	99	64.267	Pan_troglodytes
ENSHGLG00000004968	RRP1B	61	46.207	ENSPTRG00000013962	RRP1	82	48.974	Pan_troglodytes
ENSHGLG00000004968	RRP1B	100	64.668	ENSPANG00000011090	RRP1B	99	64.314	Papio_anubis
ENSHGLG00000004968	RRP1B	61	45.823	ENSPANG00000015097	RRP1	77	49.315	Papio_anubis
ENSHGLG00000004968	RRP1B	67	51.538	ENSPKIG00000003422	-	62	51.538	Paramormyrops_kingsleyae
ENSHGLG00000004968	RRP1B	51	37.360	ENSPMGG00000007512	-	88	37.500	Periophthalmus_magnuspinnatus
ENSHGLG00000004968	RRP1B	59	46.437	ENSPEMG00000018421	Rrp1	81	48.901	Peromyscus_maniculatus_bairdii
ENSHGLG00000004968	RRP1B	100	61.394	ENSPEMG00000022490	Rrp1b	99	61.507	Peromyscus_maniculatus_bairdii
ENSHGLG00000004968	RRP1B	100	57.612	ENSPCIG00000015513	RRP1B	99	57.737	Phascolarctos_cinereus
ENSHGLG00000004968	RRP1B	70	43.830	ENSPCIG00000015523	-	72	55.488	Phascolarctos_cinereus
ENSHGLG00000004968	RRP1B	53	43.014	ENSPLAG00000016684	-	52	43.562	Poecilia_latipinna
ENSHGLG00000004968	RRP1B	65	43.284	ENSPMEG00000007042	-	58	43.407	Poecilia_mexicana
ENSHGLG00000004968	RRP1B	65	43.939	ENSPREG00000015673	-	59	43.939	Poecilia_reticulata
ENSHGLG00000004968	RRP1B	61	46.207	ENSPPYG00000011474	RRP1	82	48.718	Pongo_abelii
ENSHGLG00000004968	RRP1B	100	64.837	ENSPPYG00000011470	RRP1B	99	64.444	Pongo_abelii
ENSHGLG00000004968	RRP1B	85	83.158	ENSPCAG00000013723	RRP1B	91	83.158	Procavia_capensis
ENSHGLG00000004968	RRP1B	100	66.756	ENSPCOG00000017927	RRP1B	99	66.756	Propithecus_coquereli
ENSHGLG00000004968	RRP1B	100	56.636	ENSPVAG00000001436	RRP1B	99	55.658	Pteropus_vampyrus
ENSHGLG00000004968	RRP1B	100	61.053	ENSRNOG00000001194	Rrp1b	99	60.658	Rattus_norvegicus
ENSHGLG00000004968	RRP1B	61	42.857	ENSRNOG00000001203	Rrp1	86	45.153	Rattus_norvegicus
ENSHGLG00000004968	RRP1B	100	61.017	ENSRBIG00000041689	RRP1B	99	60.915	Rhinopithecus_bieti
ENSHGLG00000004968	RRP1B	61	44.700	ENSRBIG00000032082	RRP1	77	49.589	Rhinopithecus_bieti
ENSHGLG00000004968	RRP1B	100	64.928	ENSRROG00000031499	RRP1B	99	64.837	Rhinopithecus_roxellana
ENSHGLG00000004968	RRP1B	56	45.685	ENSSBOG00000034689	RRP1	86	45.685	Saimiri_boliviensis_boliviensis
ENSHGLG00000004968	RRP1B	95	60.505	ENSSBOG00000034727	RRP1B	99	60.400	Saimiri_boliviensis_boliviensis
ENSHGLG00000004968	RRP1B	100	57.405	ENSSHAG00000017789	RRP1B	99	57.422	Sarcophilus_harrisii
ENSHGLG00000004968	RRP1B	59	48.696	ENSSFOG00015003932	-	61	48.696	Scleropages_formosus
ENSHGLG00000004968	RRP1B	66	44.928	ENSSMAG00000016847	-	87	43.132	Scophthalmus_maximus
ENSHGLG00000004968	RRP1B	71	47.287	ENSSDUG00000000551	-	54	47.287	Seriola_dumerili
ENSHGLG00000004968	RRP1B	65	47.287	ENSSLDG00000002538	-	54	47.287	Seriola_lalandi_dorsalis
ENSHGLG00000004968	RRP1B	76	59.930	ENSSARG00000003108	-	74	59.930	Sorex_araneus
ENSHGLG00000004968	RRP1B	65	47.619	ENSSPAG00000005370	-	52	47.619	Stegastes_partitus
ENSHGLG00000004968	RRP1B	100	57.507	ENSSSCG00000021698	RRP1B	99	57.086	Sus_scrofa
ENSHGLG00000004968	RRP1B	55	46.134	ENSSSCG00000037061	RRP1	83	46.825	Sus_scrofa
ENSHGLG00000004968	RRP1B	51	43.258	ENSTRUG00000017592	rrp1	99	43.258	Takifugu_rubripes
ENSHGLG00000004968	RRP1B	78	45.283	ENSTNIG00000005053	rrp1	81	41.873	Tetraodon_nigroviridis
ENSHGLG00000004968	RRP1B	78	76.261	ENSTBEG00000000422	RRP1B	99	76.261	Tupaia_belangeri
ENSHGLG00000004968	RRP1B	100	58.546	ENSTTRG00000000723	RRP1B	99	57.600	Tursiops_truncatus
ENSHGLG00000004968	RRP1B	100	61.924	ENSUAMG00000026765	RRP1B	99	61.382	Ursus_americanus
ENSHGLG00000004968	RRP1B	64	74.603	ENSUMAG00000025510	RRP1B	91	73.810	Ursus_maritimus
ENSHGLG00000004968	RRP1B	95	60.809	ENSVVUG00000024509	RRP1B	99	61.785	Vulpes_vulpes
ENSHGLG00000004968	RRP1B	79	45.631	ENSXETG00000013683	rrp1b	67	45.062	Xenopus_tropicalis
ENSHGLG00000004968	RRP1B	59	48.958	ENSXMAG00000023123	-	58	48.958	Xiphophorus_maculatus