EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000005085 (Gene tree)
Gene ID: -
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 25486 bases
Position: chrJH602096.1:6218209-6243694
Accession: 101701762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000006961	zf-C3HC	PF07967.13	8.3e-39	1	1
ENSHGLP00000006962	zf-C3HC	PF07967.13	2e-38	1	1
ENSHGLP00000006960	zf-C3HC	PF07967.13	2.7e-38	1	1
ENSHGLP00000006962	Rsm1	PF08600.10	1.5e-16	1	2
ENSHGLP00000006962	Rsm1	PF08600.10	1.5e-16	2	2
ENSHGLP00000006960	Rsm1	PF08600.10	1.8e-16	1	2
ENSHGLP00000006960	Rsm1	PF08600.10	1.8e-16	2	2
ENSHGLP00000006961	Rsm1	PF08600.10	3e-16	1	2
ENSHGLP00000006961	Rsm1	PF08600.10	3e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000007046	-	1446	-	ENSHGLP00000006962	481 (aa)	-	-
ENSHGLT00000007044	-	1848	XM_004856338	ENSHGLP00000006960	501 (aa)	XP_004856395	A0A0P6J5H7
ENSHGLT00000007045	-	1293	-	ENSHGLP00000006961	430 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000005085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000005085's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000005085	ZC3HC1	99	88.822	ENSG00000091732	ZC3HC1	99	88.822	Homo_sapiens
ENSHGLG00000005085	ZC3HC1	94	48.802	ENSAPOG00000009078	zc3hc1	95	44.646	Acanthochromis_polyacanthus
ENSHGLG00000005085	ZC3HC1	100	88.294	ENSAMEG00000005425	ZC3HC1	100	88.294	Ailuropoda_melanoleuca
ENSHGLG00000005085	ZC3HC1	92	47.256	ENSACIG00000019513	zc3hc1	95	42.254	Amphilophus_citrinellus
ENSHGLG00000005085	ZC3HC1	94	49.102	ENSAOCG00000024310	zc3hc1	95	45.051	Amphiprion_ocellaris
ENSHGLG00000005085	ZC3HC1	94	49.102	ENSAPEG00000004907	zc3hc1	95	45.051	Amphiprion_percula
ENSHGLG00000005085	ZC3HC1	86	47.907	ENSATEG00000016898	zc3hc1	86	46.759	Anabas_testudineus
ENSHGLG00000005085	ZC3HC1	88	62.472	ENSAPLG00000003832	ZC3HC1	99	62.472	Anas_platyrhynchos
ENSHGLG00000005085	ZC3HC1	100	60.117	ENSACAG00000001638	ZC3HC1	100	60.117	Anolis_carolinensis
ENSHGLG00000005085	ZC3HC1	100	87.007	ENSANAG00000022213	ZC3HC1	100	87.007	Aotus_nancymaae
ENSHGLG00000005085	ZC3HC1	88	44.516	ENSACLG00000025033	zc3hc1	98	43.255	Astatotilapia_calliptera
ENSHGLG00000005085	ZC3HC1	95	44.754	ENSAMXG00000036792	zc3hc1	97	43.918	Astyanax_mexicanus
ENSHGLG00000005085	ZC3HC1	100	87.647	ENSBTAG00000011247	ZC3HC1	100	86.653	Bos_taurus
ENSHGLG00000005085	ZC3HC1	100	88.247	ENSCJAG00000010536	ZC3HC1	100	88.247	Callithrix_jacchus
ENSHGLG00000005085	ZC3HC1	100	88.048	ENSCAFG00000028735	-	100	88.048	Canis_familiaris
ENSHGLG00000005085	ZC3HC1	100	88.048	ENSCAFG00000029401	-	99	88.048	Canis_familiaris
ENSHGLG00000005085	ZC3HC1	100	88.317	ENSCAFG00000001499	-	99	88.317	Canis_familiaris
ENSHGLG00000005085	ZC3HC1	100	88.446	ENSCAFG00000031850	-	100	88.446	Canis_familiaris
ENSHGLG00000005085	ZC3HC1	100	88.247	ENSCAFG00020006829	-	100	88.247	Canis_lupus_dingo
ENSHGLG00000005085	ZC3HC1	100	87.302	ENSCAFG00020023333	-	100	87.302	Canis_lupus_dingo
ENSHGLG00000005085	ZC3HC1	100	80.279	ENSCHIG00000014103	ZC3HC1	100	80.279	Capra_hircus
ENSHGLG00000005085	ZC3HC1	100	86.056	ENSTSYG00000002843	ZC3HC1	100	86.056	Carlito_syrichta
ENSHGLG00000005085	ZC3HC1	89	71.930	ENSCAPG00000016300	ZC3HC1	93	82.659	Cavia_aperea
ENSHGLG00000005085	ZC3HC1	100	89.535	ENSCPOG00000014034	ZC3HC1	100	89.535	Cavia_porcellus
ENSHGLG00000005085	ZC3HC1	100	76.316	ENSCCAG00000020384	ZC3HC1	100	87.225	Cebus_capucinus
ENSHGLG00000005085	ZC3HC1	100	89.044	ENSCATG00000023130	ZC3HC1	100	89.044	Cercocebus_atys
ENSHGLG00000005085	ZC3HC1	100	65.538	ENSCLAG00000008260	ZC3HC1	100	64.940	Chinchilla_lanigera
ENSHGLG00000005085	ZC3HC1	73	88.251	ENSCSAG00000009881	ZC3HC1	97	88.251	Chlorocebus_sabaeus
ENSHGLG00000005085	ZC3HC1	90	87.361	ENSCHOG00000011846	ZC3HC1	99	87.361	Choloepus_hoffmanni
ENSHGLG00000005085	ZC3HC1	96	67.629	ENSCPBG00000017519	ZC3HC1	100	66.600	Chrysemys_picta_bellii
ENSHGLG00000005085	ZC3HC1	100	88.845	ENSCANG00000029091	ZC3HC1	100	88.845	Colobus_angolensis_palliatus
ENSHGLG00000005085	ZC3HC1	100	84.462	ENSCGRG00001018805	Zc3hc1	100	84.462	Cricetulus_griseus_chok1gshd
ENSHGLG00000005085	ZC3HC1	100	83.267	ENSCGRG00000017114	Zc3hc1	100	83.267	Cricetulus_griseus_crigri
ENSHGLG00000005085	ZC3HC1	96	43.028	ENSCSEG00000009284	zc3hc1	94	42.430	Cynoglossus_semilaevis
ENSHGLG00000005085	ZC3HC1	93	45.133	ENSCVAG00000011566	zc3hc1	94	42.449	Cyprinodon_variegatus
ENSHGLG00000005085	ZC3HC1	95	47.347	ENSDARG00000062651	zc3hc1	95	46.531	Danio_rerio
ENSHGLG00000005085	ZC3HC1	100	84.661	ENSDNOG00000045016	ZC3HC1	100	84.661	Dasypus_novemcinctus
ENSHGLG00000005085	ZC3HC1	100	75.697	ENSDORG00000008697	Zc3hc1	100	75.697	Dipodomys_ordii
ENSHGLG00000005085	ZC3HC1	90	88.717	ENSEASG00005008789	ZC3HC1	97	88.717	Equus_asinus_asinus
ENSHGLG00000005085	ZC3HC1	100	87.674	ENSECAG00000017886	ZC3HC1	100	87.674	Equus_caballus
ENSHGLG00000005085	ZC3HC1	84	79.630	ENSEEUG00000003123	ZC3HC1	84	79.630	Erinaceus_europaeus
ENSHGLG00000005085	ZC3HC1	94	43.976	ENSELUG00000023168	zc3hc1	94	44.800	Esox_lucius
ENSHGLG00000005085	ZC3HC1	100	88.845	ENSFCAG00000010429	ZC3HC1	100	88.845	Felis_catus
ENSHGLG00000005085	ZC3HC1	90	61.111	ENSFALG00000005006	ZC3HC1	100	61.111	Ficedula_albicollis
ENSHGLG00000005085	ZC3HC1	100	92.326	ENSFDAG00000019897	ZC3HC1	100	92.326	Fukomys_damarensis
ENSHGLG00000005085	ZC3HC1	95	45.376	ENSFHEG00000020149	zc3hc1	96	42.084	Fundulus_heteroclitus
ENSHGLG00000005085	ZC3HC1	93	45.399	ENSGMOG00000002914	zc3hc1	95	42.443	Gadus_morhua
ENSHGLG00000005085	ZC3HC1	99	62.076	ENSGALG00000008003	ZC3HC1	99	62.076	Gallus_gallus
ENSHGLG00000005085	ZC3HC1	95	46.224	ENSGAFG00000016095	zc3hc1	96	42.857	Gambusia_affinis
ENSHGLG00000005085	ZC3HC1	93	47.130	ENSGACG00000019706	zc3hc1	94	44.672	Gasterosteus_aculeatus
ENSHGLG00000005085	ZC3HC1	78	68.542	ENSGAGG00000016106	ZC3HC1	100	68.542	Gopherus_agassizii
ENSHGLG00000005085	ZC3HC1	99	88.824	ENSGGOG00000015504	ZC3HC1	99	88.822	Gorilla_gorilla
ENSHGLG00000005085	ZC3HC1	94	44.148	ENSHBUG00000008347	zc3hc1	94	42.945	Haplochromis_burtoni
ENSHGLG00000005085	ZC3HC1	100	100.000	ENSHGLG00100011395	ZC3HC1	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000005085	ZC3HC1	95	43.443	ENSHCOG00000014309	zc3hc1	95	42.740	Hippocampus_comes
ENSHGLG00000005085	ZC3HC1	100	85.857	ENSSTOG00000023599	-	100	85.857	Ictidomys_tridecemlineatus
ENSHGLG00000005085	ZC3HC1	92	49.371	ENSKMAG00000015315	zc3hc1	88	44.148	Kryptolebias_marmoratus
ENSHGLG00000005085	ZC3HC1	94	45.892	ENSLBEG00000017325	zc3hc1	95	43.625	Labrus_bergylta
ENSHGLG00000005085	ZC3HC1	82	54.878	ENSLACG00000013032	ZC3HC1	97	54.197	Latimeria_chalumnae
ENSHGLG00000005085	ZC3HC1	99	54.335	ENSLOCG00000015963	zc3hc1	99	51.677	Lepisosteus_oculatus
ENSHGLG00000005085	ZC3HC1	100	86.628	ENSLAFG00000001292	ZC3HC1	100	86.364	Loxodonta_africana
ENSHGLG00000005085	ZC3HC1	100	89.243	ENSMFAG00000030176	ZC3HC1	100	89.706	Macaca_fascicularis
ENSHGLG00000005085	ZC3HC1	100	88.863	ENSMMUG00000006155	ZC3HC1	100	88.863	Macaca_mulatta
ENSHGLG00000005085	ZC3HC1	100	89.442	ENSMNEG00000011833	ZC3HC1	100	89.442	Macaca_nemestrina
ENSHGLG00000005085	ZC3HC1	100	89.243	ENSMLEG00000027328	ZC3HC1	100	89.243	Mandrillus_leucophaeus
ENSHGLG00000005085	ZC3HC1	93	48.182	ENSMAMG00000010691	zc3hc1	95	43.775	Mastacembelus_armatus
ENSHGLG00000005085	ZC3HC1	94	43.737	ENSMZEG00005007142	zc3hc1	94	42.536	Maylandia_zebra
ENSHGLG00000005085	ZC3HC1	99	60.947	ENSMGAG00000002977	ZC3HC1	99	61.736	Meleagris_gallopavo
ENSHGLG00000005085	ZC3HC1	82	79.518	ENSMAUG00000017032	Zc3hc1	92	79.518	Mesocricetus_auratus
ENSHGLG00000005085	ZC3HC1	100	87.849	ENSMICG00000009167	ZC3HC1	100	87.849	Microcebus_murinus
ENSHGLG00000005085	ZC3HC1	100	84.263	ENSMOCG00000015239	Zc3hc1	100	84.412	Microtus_ochrogaster
ENSHGLG00000005085	ZC3HC1	86	42.857	ENSMMOG00000002204	zc3hc1	98	41.778	Mola_mola
ENSHGLG00000005085	ZC3HC1	100	63.462	ENSMODG00000014630	ZC3HC1	100	63.462	Monodelphis_domestica
ENSHGLG00000005085	ZC3HC1	93	46.243	ENSMALG00000014447	zc3hc1	95	42.799	Monopterus_albus
ENSHGLG00000005085	ZC3HC1	100	83.267	MGP_CAROLIEiJ_G0028183	Zc3hc1	100	83.267	Mus_caroli
ENSHGLG00000005085	ZC3HC1	100	82.669	ENSMUSG00000039130	Zc3hc1	100	82.669	Mus_musculus
ENSHGLG00000005085	ZC3HC1	100	76.693	MGP_PahariEiJ_G0021941	Zc3hc1	100	76.693	Mus_pahari
ENSHGLG00000005085	ZC3HC1	100	82.831	MGP_SPRETEiJ_G0029183	Zc3hc1	100	82.831	Mus_spretus
ENSHGLG00000005085	ZC3HC1	100	86.722	ENSMPUG00000005297	ZC3HC1	95	87.448	Mustela_putorius_furo
ENSHGLG00000005085	ZC3HC1	65	85.079	ENSMLUG00000029228	-	99	81.232	Myotis_lucifugus
ENSHGLG00000005085	ZC3HC1	100	86.931	ENSMLUG00000000063	-	100	86.931	Myotis_lucifugus
ENSHGLG00000005085	ZC3HC1	100	84.118	ENSNGAG00000019014	Zc3hc1	100	83.897	Nannospalax_galili
ENSHGLG00000005085	ZC3HC1	93	46.951	ENSNBRG00000004577	zc3hc1	94	42.623	Neolamprologus_brichardi
ENSHGLG00000005085	ZC3HC1	99	88.024	ENSNLEG00000012698	ZC3HC1	99	88.024	Nomascus_leucogenys
ENSHGLG00000005085	ZC3HC1	98	77.328	ENSMEUG00000011023	ZC3HC1	98	77.328	Notamacropus_eugenii
ENSHGLG00000005085	ZC3HC1	75	81.395	ENSOPRG00000007867	-	68	81.395	Ochotona_princeps
ENSHGLG00000005085	ZC3HC1	100	88.837	ENSODEG00000014604	ZC3HC1	100	88.837	Octodon_degus
ENSHGLG00000005085	ZC3HC1	94	44.353	ENSONIG00000011644	zc3hc1	94	43.149	Oreochromis_niloticus
ENSHGLG00000005085	ZC3HC1	90	67.241	ENSOANG00000011460	ZC3HC1	100	67.241	Ornithorhynchus_anatinus
ENSHGLG00000005085	ZC3HC1	100	86.006	ENSOCUG00000017137	ZC3HC1	100	83.168	Oryctolagus_cuniculus
ENSHGLG00000005085	ZC3HC1	95	43.532	ENSORLG00000014409	zc3hc1	94	42.740	Oryzias_latipes
ENSHGLG00000005085	ZC3HC1	95	43.737	ENSORLG00020015874	zc3hc1	94	42.945	Oryzias_latipes_hni
ENSHGLG00000005085	ZC3HC1	95	43.532	ENSORLG00015014641	zc3hc1	94	42.740	Oryzias_latipes_hsok
ENSHGLG00000005085	ZC3HC1	94	48.036	ENSOMEG00000020604	zc3hc1	94	44.353	Oryzias_melastigma
ENSHGLG00000005085	ZC3HC1	94	48.036	ENSOMEG00000000215	zc3hc1	94	43.943	Oryzias_melastigma
ENSHGLG00000005085	ZC3HC1	100	81.673	ENSOGAG00000026193	ZC3HC1	100	81.673	Otolemur_garnettii
ENSHGLG00000005085	ZC3HC1	100	88.630	ENSOARG00000004907	ZC3HC1	99	87.129	Ovis_aries
ENSHGLG00000005085	ZC3HC1	99	88.822	ENSPPAG00000043172	ZC3HC1	99	88.822	Pan_paniscus
ENSHGLG00000005085	ZC3HC1	100	90.000	ENSPPRG00000001004	ZC3HC1	100	88.048	Panthera_pardus
ENSHGLG00000005085	ZC3HC1	100	88.645	ENSPTIG00000007823	ZC3HC1	100	88.645	Panthera_tigris_altaica
ENSHGLG00000005085	ZC3HC1	99	88.423	ENSPTRG00000019685	ZC3HC1	99	88.423	Pan_troglodytes
ENSHGLG00000005085	ZC3HC1	100	88.863	ENSPANG00000014229	ZC3HC1	100	88.863	Papio_anubis
ENSHGLG00000005085	ZC3HC1	94	50.943	ENSPKIG00000007172	zc3hc1	95	47.095	Paramormyrops_kingsleyae
ENSHGLG00000005085	ZC3HC1	94	66.450	ENSPSIG00000016646	ZC3HC1	100	60.980	Pelodiscus_sinensis
ENSHGLG00000005085	ZC3HC1	100	42.147	ENSPMGG00000003548	zc3hc1	99	42.141	Periophthalmus_magnuspinnatus
ENSHGLG00000005085	ZC3HC1	100	84.263	ENSPEMG00000000514	Zc3hc1	100	84.263	Peromyscus_maniculatus_bairdii
ENSHGLG00000005085	ZC3HC1	99	73.253	ENSPCIG00000020619	ZC3HC1	100	76.864	Phascolarctos_cinereus
ENSHGLG00000005085	ZC3HC1	95	45.058	ENSPFOG00000003466	zc3hc1	96	42.656	Poecilia_formosa
ENSHGLG00000005085	ZC3HC1	95	45.058	ENSPLAG00000022211	zc3hc1	96	42.600	Poecilia_latipinna
ENSHGLG00000005085	ZC3HC1	95	45.058	ENSPMEG00000001458	zc3hc1	96	42.656	Poecilia_mexicana
ENSHGLG00000005085	ZC3HC1	95	45.349	ENSPREG00000004004	zc3hc1	96	43.058	Poecilia_reticulata
ENSHGLG00000005085	ZC3HC1	99	80.318	ENSPPYG00000017998	ZC3HC1	99	80.318	Pongo_abelii
ENSHGLG00000005085	ZC3HC1	92	84.348	ENSPCAG00000001182	ZC3HC1	100	84.348	Procavia_capensis
ENSHGLG00000005085	ZC3HC1	100	88.645	ENSPCOG00000017354	ZC3HC1	100	88.645	Propithecus_coquereli
ENSHGLG00000005085	ZC3HC1	100	82.072	ENSPVAG00000003195	ZC3HC1	100	81.873	Pteropus_vampyrus
ENSHGLG00000005085	ZC3HC1	94	43.737	ENSPNYG00000020692	zc3hc1	94	42.536	Pundamilia_nyererei
ENSHGLG00000005085	ZC3HC1	94	44.589	ENSPNAG00000020746	zc3hc1	95	44.468	Pygocentrus_nattereri
ENSHGLG00000005085	ZC3HC1	100	82.704	ENSRNOG00000010154	Zc3hc1	100	82.704	Rattus_norvegicus
ENSHGLG00000005085	ZC3HC1	90	89.625	ENSRBIG00000029409	ZC3HC1	100	89.625	Rhinopithecus_bieti
ENSHGLG00000005085	ZC3HC1	100	88.845	ENSRROG00000041831	ZC3HC1	100	88.845	Rhinopithecus_roxellana
ENSHGLG00000005085	ZC3HC1	86	88.095	ENSSBOG00000032787	ZC3HC1	99	88.095	Saimiri_boliviensis_boliviensis
ENSHGLG00000005085	ZC3HC1	90	78.022	ENSSHAG00000002529	ZC3HC1	99	77.609	Sarcophilus_harrisii
ENSHGLG00000005085	ZC3HC1	94	50.479	ENSSFOG00015003667	zc3hc1	91	48.665	Scleropages_formosus
ENSHGLG00000005085	ZC3HC1	96	44.200	ENSSMAG00000000647	zc3hc1	86	44.600	Scophthalmus_maximus
ENSHGLG00000005085	ZC3HC1	95	45.621	ENSSDUG00000004241	zc3hc1	93	44.625	Seriola_dumerili
ENSHGLG00000005085	ZC3HC1	95	45.621	ENSSLDG00000025056	zc3hc1	93	44.625	Seriola_lalandi_dorsalis
ENSHGLG00000005085	ZC3HC1	99	76.846	ENSSARG00000012013	ZC3HC1	99	76.846	Sorex_araneus
ENSHGLG00000005085	ZC3HC1	89	58.430	ENSSPUG00000000778	ZC3HC1	85	58.430	Sphenodon_punctatus
ENSHGLG00000005085	ZC3HC1	94	49.401	ENSSPAG00000020041	zc3hc1	95	45.455	Stegastes_partitus
ENSHGLG00000005085	ZC3HC1	100	86.255	ENSSSCG00000016565	ZC3HC1	100	86.255	Sus_scrofa
ENSHGLG00000005085	ZC3HC1	91	50.321	ENSTRUG00000020077	zc3hc1	95	43.238	Takifugu_rubripes
ENSHGLG00000005085	ZC3HC1	94	42.796	ENSTNIG00000007585	zc3hc1	99	42.300	Tetraodon_nigroviridis
ENSHGLG00000005085	ZC3HC1	98	80.488	ENSTBEG00000005216	ZC3HC1	99	77.246	Tupaia_belangeri
ENSHGLG00000005085	ZC3HC1	96	87.917	ENSTTRG00000008458	ZC3HC1	100	87.917	Tursiops_truncatus
ENSHGLG00000005085	ZC3HC1	100	88.645	ENSUAMG00000020249	ZC3HC1	100	88.645	Ursus_americanus
ENSHGLG00000005085	ZC3HC1	100	88.446	ENSUMAG00000009268	ZC3HC1	100	88.446	Ursus_maritimus
ENSHGLG00000005085	ZC3HC1	90	83.673	ENSVPAG00000010846	ZC3HC1	77	83.673	Vicugna_pacos
ENSHGLG00000005085	ZC3HC1	100	87.552	ENSVVUG00000012386	ZC3HC1	100	87.552	Vulpes_vulpes
ENSHGLG00000005085	ZC3HC1	95	51.828	ENSXETG00000033900	zc3hc1	95	51.828	Xenopus_tropicalis
ENSHGLG00000005085	ZC3HC1	95	42.857	ENSXCOG00000013570	zc3hc1	96	43.846	Xiphophorus_couchianus
ENSHGLG00000005085	ZC3HC1	88	44.934	ENSXMAG00000010979	zc3hc1	95	44.035	Xiphophorus_maculatus