EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000005215 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA2
Alias: BAF190|BRM|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 170152 bases
Position: chrJH602049.1:6695658-6865809
Accession: 101706423
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000007144	BRK	PF07533.16	2.3e-17	1	1
ENSHGLP00000007145	BRK	PF07533.16	2.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000007229	SMARCA2-201	4776	-	ENSHGLP00000007144	1591 (aa)	-	-
ENSHGLT00000007234	SMARCA2-206	783	-	ENSHGLP00000007149	260 (aa)	-	-
ENSHGLT00000007231	SMARCA2-203	4349	XM_013069686	ENSHGLP00000007146	276 (aa)	XP_012925140	UPI0006574900
ENSHGLT00000007230	SMARCA2-202	4758	XM_004838213	ENSHGLP00000007145	1585 (aa)	-	-
ENSHGLT00000007233	SMARCA2-205	204	-	ENSHGLP00000007148	68 (aa)	-	UPI000719A11A
ENSHGLT00000007232	SMARCA2-204	837	-	ENSHGLP00000007147	278 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000005215's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000005215's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000005215	SMARCA2	95	73.867	ENSHGLG00000010519	SMARCA4	82	79.940

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000005215	SMARCA2	99	96.831	ENSG00000080503	SMARCA2	100	100.000	Homo_sapiens
ENSHGLG00000005215	SMARCA2	98	79.987	ENSAPOG00000002641	SMARCA2	97	79.625	Acanthochromis_polyacanthus
ENSHGLG00000005215	SMARCA2	80	99.290	ENSAMEG00000012325	SMARCA2	99	99.290	Ailuropoda_melanoleuca
ENSHGLG00000005215	SMARCA2	98	79.064	ENSACIG00000015607	SMARCA2	97	78.944	Amphilophus_citrinellus
ENSHGLG00000005215	SMARCA2	98	80.051	ENSAOCG00000009647	-	97	79.754	Amphiprion_ocellaris
ENSHGLG00000005215	SMARCA2	98	79.987	ENSAPEG00000007646	SMARCA2	97	79.690	Amphiprion_percula
ENSHGLG00000005215	SMARCA2	99	80.566	ENSATEG00000006916	SMARCA2	96	80.414	Anabas_testudineus
ENSHGLG00000005215	SMARCA2	89	88.539	ENSAPLG00000013873	SMARCA2	93	88.347	Anas_platyrhynchos
ENSHGLG00000005215	SMARCA2	98	89.153	ENSACAG00000002423	SMARCA2	99	88.471	Anolis_carolinensis
ENSHGLG00000005215	SMARCA2	99	96.766	ENSANAG00000026498	SMARCA2	99	96.766	Aotus_nancymaae
ENSHGLG00000005215	SMARCA2	98	80.178	ENSACLG00000004248	SMARCA2	97	80.143	Astatotilapia_calliptera
ENSHGLG00000005215	SMARCA2	100	79.046	ENSAMXG00000012404	smarca2	97	81.326	Astyanax_mexicanus
ENSHGLG00000005215	SMARCA2	99	95.096	ENSBTAG00000007494	SMARCA2	99	95.350	Bos_taurus
ENSHGLG00000005215	SMARCA2	99	96.315	ENSCJAG00000010710	SMARCA2	99	96.788	Callithrix_jacchus
ENSHGLG00000005215	SMARCA2	99	95.437	ENSCAFG00000002013	SMARCA2	99	95.478	Canis_familiaris
ENSHGLG00000005215	SMARCA2	77	94.823	ENSCAFG00020026802	SMARCA2	98	94.823	Canis_lupus_dingo
ENSHGLG00000005215	SMARCA2	99	95.691	ENSCHIG00000025863	SMARCA2	99	95.691	Capra_hircus
ENSHGLG00000005215	SMARCA2	99	96.962	ENSTSYG00000003858	SMARCA2	99	96.962	Carlito_syrichta
ENSHGLG00000005215	SMARCA2	99	93.430	ENSCAPG00000002890	SMARCA2	100	93.786	Cavia_aperea
ENSHGLG00000005215	SMARCA2	99	97.059	ENSCPOG00000005475	SMARCA2	99	96.964	Cavia_porcellus
ENSHGLG00000005215	SMARCA2	99	96.956	ENSCCAG00000030636	SMARCA2	99	96.956	Cebus_capucinus
ENSHGLG00000005215	SMARCA2	99	95.685	ENSCATG00000031470	SMARCA2	99	95.812	Cercocebus_atys
ENSHGLG00000005215	SMARCA2	99	97.643	ENSCLAG00000014484	SMARCA2	99	97.643	Chinchilla_lanigera
ENSHGLG00000005215	SMARCA2	93	95.335	ENSCSAG00000008650	SMARCA2	99	95.673	Chlorocebus_sabaeus
ENSHGLG00000005215	SMARCA2	87	90.535	ENSCHOG00000004316	SMARCA2	87	90.535	Choloepus_hoffmanni
ENSHGLG00000005215	SMARCA2	94	94.669	ENSCPBG00000025463	SMARCA2	99	94.943	Chrysemys_picta_bellii
ENSHGLG00000005215	SMARCA2	99	96.512	ENSCANG00000039597	SMARCA2	99	96.609	Colobus_angolensis_palliatus
ENSHGLG00000005215	SMARCA2	99	89.664	ENSCGRG00001002323	Smarca2	99	88.931	Cricetulus_griseus_chok1gshd
ENSHGLG00000005215	SMARCA2	99	76.589	ENSCSEG00000019311	SMARCA2	97	76.675	Cynoglossus_semilaevis
ENSHGLG00000005215	SMARCA2	84	79.041	ENSCVAG00000016571	SMARCA2	75	85.798	Cyprinodon_variegatus
ENSHGLG00000005215	SMARCA2	98	81.481	ENSDARG00000008904	smarca2	97	81.165	Danio_rerio
ENSHGLG00000005215	SMARCA2	99	94.207	ENSDNOG00000006402	SMARCA2	99	94.207	Dasypus_novemcinctus
ENSHGLG00000005215	SMARCA2	99	96.741	ENSDORG00000014832	Smarca2	99	96.741	Dipodomys_ordii
ENSHGLG00000005215	SMARCA2	78	61.129	FBgn0000212	brm	72	61.576	Drosophila_melanogaster
ENSHGLG00000005215	SMARCA2	86	60.955	ENSEBUG00000002449	-	89	68.408	Eptatretus_burgeri
ENSHGLG00000005215	SMARCA2	94	69.960	ENSEBUG00000011442	-	93	75.947	Eptatretus_burgeri
ENSHGLG00000005215	SMARCA2	99	95.605	ENSEASG00005010312	SMARCA2	99	95.605	Equus_asinus_asinus
ENSHGLG00000005215	SMARCA2	66	98.611	ENSEEUG00000015540	-	69	98.611	Erinaceus_europaeus
ENSHGLG00000005215	SMARCA2	92	79.033	ENSELUG00000010318	smarca2	93	78.994	Esox_lucius
ENSHGLG00000005215	SMARCA2	99	94.901	ENSFCAG00000001568	SMARCA2	99	94.904	Felis_catus
ENSHGLG00000005215	SMARCA2	98	90.230	ENSFALG00000010416	SMARCA2	99	90.859	Ficedula_albicollis
ENSHGLG00000005215	SMARCA2	99	97.657	ENSFDAG00000010502	SMARCA2	99	97.657	Fukomys_damarensis
ENSHGLG00000005215	SMARCA2	98	80.657	ENSFHEG00000021250	SMARCA2	82	83.511	Fundulus_heteroclitus
ENSHGLG00000005215	SMARCA2	97	76.737	ENSGMOG00000014229	SMARCA2	97	76.992	Gadus_morhua
ENSHGLG00000005215	SMARCA2	98	90.577	ENSGALG00000010164	SMARCA2	99	90.494	Gallus_gallus
ENSHGLG00000005215	SMARCA2	95	76.312	ENSGAFG00000001164	SMARCA2	93	76.578	Gambusia_affinis
ENSHGLG00000005215	SMARCA2	98	78.984	ENSGACG00000014488	SMARCA2	82	83.333	Gasterosteus_aculeatus
ENSHGLG00000005215	SMARCA2	99	90.829	ENSGAGG00000024412	SMARCA2	99	90.829	Gopherus_agassizii
ENSHGLG00000005215	SMARCA2	94	99.917	ENSGGOG00000000513	SMARCA2	99	97.606	Gorilla_gorilla
ENSHGLG00000005215	SMARCA2	100	79.141	ENSHBUG00000006691	SMARCA2	96	79.729	Haplochromis_burtoni
ENSHGLG00000005215	SMARCA2	100	97.161	ENSHGLG00100010496	SMARCA2	100	97.161	Heterocephalus_glaber_male
ENSHGLG00000005215	SMARCA2	88	74.733	ENSHCOG00000015348	-	74	86.733	Hippocampus_comes
ENSHGLG00000005215	SMARCA2	98	80.529	ENSIPUG00000011060	smarca2	94	79.508	Ictalurus_punctatus
ENSHGLG00000005215	SMARCA2	99	97.063	ENSSTOG00000006812	SMARCA2	99	97.063	Ictidomys_tridecemlineatus
ENSHGLG00000005215	SMARCA2	99	96.456	ENSJJAG00000010867	Smarca2	99	96.456	Jaculus_jaculus
ENSHGLG00000005215	SMARCA2	98	80.202	ENSKMAG00000015844	-	97	79.718	Kryptolebias_marmoratus
ENSHGLG00000005215	SMARCA2	96	84.276	ENSLOCG00000011499	smarca2	97	82.853	Lepisosteus_oculatus
ENSHGLG00000005215	SMARCA2	99	93.189	ENSLAFG00000014061	SMARCA2	82	97.465	Loxodonta_africana
ENSHGLG00000005215	SMARCA2	99	95.558	ENSMFAG00000003814	SMARCA2	99	95.558	Macaca_fascicularis
ENSHGLG00000005215	SMARCA2	99	96.512	ENSMMUG00000015279	SMARCA2	99	96.512	Macaca_mulatta
ENSHGLG00000005215	SMARCA2	99	95.567	ENSMNEG00000041069	SMARCA2	99	95.974	Macaca_nemestrina
ENSHGLG00000005215	SMARCA2	99	94.547	ENSMLEG00000027418	SMARCA2	99	94.483	Mandrillus_leucophaeus
ENSHGLG00000005215	SMARCA2	98	81.577	ENSMAMG00000003056	SMARCA2	97	82.031	Mastacembelus_armatus
ENSHGLG00000005215	SMARCA2	100	79.289	ENSMZEG00005020709	SMARCA2	96	79.884	Maylandia_zebra
ENSHGLG00000005215	SMARCA2	76	77.955	ENSMGAG00000005160	-	94	87.442	Meleagris_gallopavo
ENSHGLG00000005215	SMARCA2	99	95.796	ENSMICG00000005162	SMARCA2	99	95.860	Microcebus_murinus
ENSHGLG00000005215	SMARCA2	99	96.200	ENSMOCG00000001611	Smarca2	100	95.343	Microtus_ochrogaster
ENSHGLG00000005215	SMARCA2	99	78.874	ENSMMOG00000014196	SMARCA2	97	78.743	Mola_mola
ENSHGLG00000005215	SMARCA2	99	92.405	ENSMODG00000003578	SMARCA2	99	92.405	Monodelphis_domestica
ENSHGLG00000005215	SMARCA2	99	79.823	ENSMALG00000009611	SMARCA2	97	79.689	Monopterus_albus
ENSHGLG00000005215	SMARCA2	99	96.503	MGP_CAROLIEiJ_G0022841	Smarca2	99	96.503	Mus_caroli
ENSHGLG00000005215	SMARCA2	99	96.565	ENSMUSG00000024921	Smarca2	99	99.441	Mus_musculus
ENSHGLG00000005215	SMARCA2	99	96.563	MGP_PahariEiJ_G0014334	Smarca2	99	96.563	Mus_pahari
ENSHGLG00000005215	SMARCA2	99	96.313	MGP_SPRETEiJ_G0023759	Smarca2	99	100.000	Mus_spretus
ENSHGLG00000005215	SMARCA2	80	99.291	ENSMPUG00000005171	SMARCA2	94	99.291	Mustela_putorius_furo
ENSHGLG00000005215	SMARCA2	99	90.019	ENSMLUG00000002342	SMARCA2	83	93.409	Myotis_lucifugus
ENSHGLG00000005215	SMARCA2	99	95.762	ENSNGAG00000000108	Smarca2	99	95.762	Nannospalax_galili
ENSHGLG00000005215	SMARCA2	94	66.667	ENSNBRG00000017998	SMARCA2	94	83.085	Neolamprologus_brichardi
ENSHGLG00000005215	SMARCA2	99	94.480	ENSNLEG00000008575	SMARCA2	99	94.353	Nomascus_leucogenys
ENSHGLG00000005215	SMARCA2	99	84.781	ENSMEUG00000009812	SMARCA2	99	84.456	Notamacropus_eugenii
ENSHGLG00000005215	SMARCA2	99	90.000	ENSOPRG00000013474	SMARCA2	99	90.828	Ochotona_princeps
ENSHGLG00000005215	SMARCA2	100	95.529	ENSODEG00000005452	SMARCA2	99	96.817	Octodon_degus
ENSHGLG00000005215	SMARCA2	99	80.062	ENSONIG00000014163	SMARCA2	80	86.223	Oreochromis_niloticus
ENSHGLG00000005215	SMARCA2	99	96.178	ENSOCUG00000006320	SMARCA2	99	96.178	Oryctolagus_cuniculus
ENSHGLG00000005215	SMARCA2	98	79.936	ENSORLG00000020820	SMARCA2	97	79.871	Oryzias_latipes
ENSHGLG00000005215	SMARCA2	98	79.936	ENSORLG00015006289	SMARCA2	96	77.128	Oryzias_latipes_hsok
ENSHGLG00000005215	SMARCA2	98	80.293	ENSOMEG00000009736	-	97	79.151	Oryzias_melastigma
ENSHGLG00000005215	SMARCA2	99	92.618	ENSOGAG00000017053	SMARCA2	100	92.613	Otolemur_garnettii
ENSHGLG00000005215	SMARCA2	99	94.148	ENSOARG00000013265	SMARCA2	99	94.148	Ovis_aries
ENSHGLG00000005215	SMARCA2	99	93.342	ENSPPAG00000038717	SMARCA2	99	93.972	Pan_paniscus
ENSHGLG00000005215	SMARCA2	99	94.965	ENSPPRG00000001879	SMARCA2	99	94.968	Panthera_pardus
ENSHGLG00000005215	SMARCA2	99	95.327	ENSPTRG00000051168	SMARCA2	99	95.198	Pan_troglodytes
ENSHGLG00000005215	SMARCA2	99	90.006	ENSPANG00000025121	SMARCA2	99	89.581	Papio_anubis
ENSHGLG00000005215	SMARCA2	99	82.038	ENSPKIG00000018469	-	97	81.634	Paramormyrops_kingsleyae
ENSHGLG00000005215	SMARCA2	99	90.265	ENSPSIG00000006284	SMARCA2	99	90.265	Pelodiscus_sinensis
ENSHGLG00000005215	SMARCA2	99	73.741	ENSPMGG00000013696	-	97	74.000	Periophthalmus_magnuspinnatus
ENSHGLG00000005215	SMARCA2	99	95.974	ENSPEMG00000019821	Smarca2	99	95.974	Peromyscus_maniculatus_bairdii
ENSHGLG00000005215	SMARCA2	94	72.645	ENSPMAG00000005337	-	94	72.482	Petromyzon_marinus
ENSHGLG00000005215	SMARCA2	99	92.489	ENSPCIG00000015658	SMARCA2	99	92.680	Phascolarctos_cinereus
ENSHGLG00000005215	SMARCA2	98	79.823	ENSPFOG00000001856	SMARCA2	97	79.086	Poecilia_formosa
ENSHGLG00000005215	SMARCA2	99	79.526	ENSPLAG00000017829	SMARCA2	95	78.873	Poecilia_latipinna
ENSHGLG00000005215	SMARCA2	99	79.575	ENSPMEG00000001815	-	97	76.111	Poecilia_mexicana
ENSHGLG00000005215	SMARCA2	98	79.899	ENSPREG00000013800	SMARCA2	97	79.089	Poecilia_reticulata
ENSHGLG00000005215	SMARCA2	99	95.539	ENSPPYG00000019258	SMARCA2	99	95.666	Pongo_abelii
ENSHGLG00000005215	SMARCA2	75	83.042	ENSPCAG00000016969	SMARCA2	77	83.760	Procavia_capensis
ENSHGLG00000005215	SMARCA2	99	93.930	ENSPCOG00000025709	SMARCA2	99	94.182	Propithecus_coquereli
ENSHGLG00000005215	SMARCA2	90	98.883	ENSPVAG00000000901	SMARCA2	93	98.773	Pteropus_vampyrus
ENSHGLG00000005215	SMARCA2	100	76.131	ENSPNYG00000004533	SMARCA2	97	75.969	Pundamilia_nyererei
ENSHGLG00000005215	SMARCA2	98	81.973	ENSPNAG00000014635	smarca2	96	81.830	Pygocentrus_nattereri
ENSHGLG00000005215	SMARCA2	99	96.030	ENSRNOG00000011931	Smarca2	99	96.030	Rattus_norvegicus
ENSHGLG00000005215	SMARCA2	99	95.070	ENSRBIG00000038618	SMARCA2	99	95.134	Rhinopithecus_bieti
ENSHGLG00000005215	SMARCA2	99	95.241	ENSRROG00000019271	SMARCA2	99	95.848	Rhinopithecus_roxellana
ENSHGLG00000005215	SMARCA2	99	92.793	ENSSBOG00000034827	SMARCA2	99	93.338	Saimiri_boliviensis_boliviensis
ENSHGLG00000005215	SMARCA2	96	95.712	ENSSHAG00000007884	SMARCA2	99	91.772	Sarcophilus_harrisii
ENSHGLG00000005215	SMARCA2	88	84.807	ENSSFOG00015014870	SMARCA2	94	84.161	Scleropages_formosus
ENSHGLG00000005215	SMARCA2	98	79.810	ENSSMAG00000013707	SMARCA2	97	79.575	Scophthalmus_maximus
ENSHGLG00000005215	SMARCA2	99	79.875	ENSSDUG00000008852	-	97	80.505	Seriola_dumerili
ENSHGLG00000005215	SMARCA2	99	80.088	ENSSLDG00000025449	SMARCA2	97	79.833	Seriola_lalandi_dorsalis
ENSHGLG00000005215	SMARCA2	95	97.207	ENSSARG00000007888	SMARCA2	92	97.546	Sorex_araneus
ENSHGLG00000005215	SMARCA2	96	84.460	ENSSPUG00000001629	SMARCA2	97	86.228	Sphenodon_punctatus
ENSHGLG00000005215	SMARCA2	98	80.152	ENSSPAG00000020091	-	97	79.600	Stegastes_partitus
ENSHGLG00000005215	SMARCA2	99	95.374	ENSSSCG00000005232	SMARCA2	99	95.223	Sus_scrofa
ENSHGLG00000005215	SMARCA2	96	89.320	ENSTGUG00000005460	SMARCA2	97	89.994	Taeniopygia_guttata
ENSHGLG00000005215	SMARCA2	98	79.619	ENSTRUG00000015619	SMARCA2	97	79.328	Takifugu_rubripes
ENSHGLG00000005215	SMARCA2	67	100.000	ENSTBEG00000008767	SMARCA2	73	100.000	Tupaia_belangeri
ENSHGLG00000005215	SMARCA2	95	94.555	ENSTTRG00000002033	SMARCA2	95	93.272	Tursiops_truncatus
ENSHGLG00000005215	SMARCA2	90	91.725	ENSUAMG00000024701	SMARCA2	99	93.106	Ursus_americanus
ENSHGLG00000005215	SMARCA2	91	85.878	ENSVPAG00000001204	SMARCA2	100	85.878	Vicugna_pacos
ENSHGLG00000005215	SMARCA2	75	95.830	ENSVVUG00000004598	SMARCA2	99	95.830	Vulpes_vulpes
ENSHGLG00000005215	SMARCA2	89	79.047	ENSXCOG00000011073	SMARCA2	97	79.308	Xiphophorus_couchianus
ENSHGLG00000005215	SMARCA2	98	80.000	ENSXMAG00000015611	SMARCA2	96	78.686	Xiphophorus_maculatus