EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000005409 (Gene tree)
Gene ID: -
Gene Symbol: RBM28
Alias: FLJ10377
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 30537 bases
Position: chrJH602096.1:7628843-7659379
Accession: 101721886
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000007428	RRM_1	PF00076.22	2.8e-56	1	3
ENSHGLP00000007428	RRM_1	PF00076.22	2.8e-56	2	3
ENSHGLP00000007428	RRM_1	PF00076.22	2.8e-56	3	3
ENSHGLP00000007427	RRM_1	PF00076.22	3.2e-56	1	3
ENSHGLP00000007427	RRM_1	PF00076.22	3.2e-56	2	3
ENSHGLP00000007427	RRM_1	PF00076.22	3.2e-56	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000007512	-	2540	XM_004856399	ENSHGLP00000007427	758 (aa)	XP_004856456	G5BHA3
ENSHGLT00000007513	-	2238	-	ENSHGLP00000007428	745 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000005409's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000005409's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000005409	RBM28	100	85.283	ENSG00000106344	RBM28	100	95.000	Homo_sapiens
ENSHGLG00000005409	RBM28	58	53.620	ENSAPOG00000015512	rbm28	100	50.769	Acanthochromis_polyacanthus
ENSHGLG00000005409	RBM28	100	88.043	ENSAMEG00000004776	RBM28	92	88.043	Ailuropoda_melanoleuca
ENSHGLG00000005409	RBM28	56	53.756	ENSACIG00000023153	rbm28	99	50.102	Amphilophus_citrinellus
ENSHGLG00000005409	RBM28	58	53.620	ENSAOCG00000000462	rbm28	100	51.276	Amphiprion_ocellaris
ENSHGLG00000005409	RBM28	58	53.394	ENSAPEG00000012996	rbm28	100	51.213	Amphiprion_percula
ENSHGLG00000005409	RBM28	59	50.427	ENSATEG00000001672	rbm28	100	48.539	Anabas_testudineus
ENSHGLG00000005409	RBM28	100	85.112	ENSANAG00000033922	RBM28	100	85.244	Aotus_nancymaae
ENSHGLG00000005409	RBM28	100	50.127	ENSACLG00000025024	rbm28	100	51.584	Astatotilapia_calliptera
ENSHGLG00000005409	RBM28	59	58.409	ENSAMXG00000000763	rbm28	99	58.810	Astyanax_mexicanus
ENSHGLG00000005409	RBM28	90	95.000	ENSBTAG00000017001	RBM28	100	95.000	Bos_taurus
ENSHGLG00000005409	RBM28	100	83.596	ENSCJAG00000017731	RBM28	100	84.514	Callithrix_jacchus
ENSHGLG00000005409	RBM28	100	83.112	ENSCAFG00000001667	RBM28	100	83.644	Canis_familiaris
ENSHGLG00000005409	RBM28	100	83.112	ENSCAFG00020021648	RBM28	100	83.644	Canis_lupus_dingo
ENSHGLG00000005409	RBM28	100	81.686	ENSCHIG00000014146	RBM28	100	81.939	Capra_hircus
ENSHGLG00000005409	RBM28	94	90.000	ENSTSYG00000002892	RBM28	100	90.000	Carlito_syrichta
ENSHGLG00000005409	RBM28	83	68.971	ENSCAPG00000013218	RBM28	97	68.534	Cavia_aperea
ENSHGLG00000005409	RBM28	100	89.065	ENSCPOG00000006253	RBM28	100	89.050	Cavia_porcellus
ENSHGLG00000005409	RBM28	100	84.321	ENSCCAG00000035105	RBM28	100	84.585	Cebus_capucinus
ENSHGLG00000005409	RBM28	100	84.121	ENSCATG00000040497	RBM28	100	92.500	Cercocebus_atys
ENSHGLG00000005409	RBM28	100	85.375	ENSCLAG00000003707	RBM28	100	85.771	Chinchilla_lanigera
ENSHGLG00000005409	RBM28	100	84.848	ENSCSAG00000010161	RBM28	100	84.980	Chlorocebus_sabaeus
ENSHGLG00000005409	RBM28	57	86.290	ENSCHOG00000001994	-	63	86.290	Choloepus_hoffmanni
ENSHGLG00000005409	RBM28	52	59.955	ENSCPBG00000018088	RBM28	86	59.827	Chrysemys_picta_bellii
ENSHGLG00000005409	RBM28	67	41.432	ENSCING00000009238	-	85	40.426	Ciona_intestinalis
ENSHGLG00000005409	RBM28	91	83.650	ENSCANG00000038397	RBM28	100	95.000	Colobus_angolensis_palliatus
ENSHGLG00000005409	RBM28	67	82.696	ENSCGRG00001021278	Rbm28	100	79.284	Cricetulus_griseus_chok1gshd
ENSHGLG00000005409	RBM28	100	80.472	ENSCGRG00000005098	Rbm28	100	80.472	Cricetulus_griseus_crigri
ENSHGLG00000005409	RBM28	100	50.385	ENSCSEG00000004212	rbm28	100	50.970	Cynoglossus_semilaevis
ENSHGLG00000005409	RBM28	59	54.066	ENSCVAG00000010493	rbm28	99	49.551	Cyprinodon_variegatus
ENSHGLG00000005409	RBM28	86	54.667	ENSDARG00000025332	rbm28	100	48.387	Danio_rerio
ENSHGLG00000005409	RBM28	100	82.345	ENSDNOG00000001124	RBM28	100	82.718	Dasypus_novemcinctus
ENSHGLG00000005409	RBM28	66	81.250	ENSDORG00000004184	Rbm28	97	81.250	Dipodomys_ordii
ENSHGLG00000005409	RBM28	65	39.228	FBgn0260456	CG4806	66	39.248	Drosophila_melanogaster
ENSHGLG00000005409	RBM28	100	70.933	ENSETEG00000007130	RBM28	99	71.238	Echinops_telfairi
ENSHGLG00000005409	RBM28	99	40.964	ENSEBUG00000004419	rbm28	98	40.751	Eptatretus_burgeri
ENSHGLG00000005409	RBM28	100	83.442	ENSEASG00005008528	RBM28	100	83.963	Equus_asinus_asinus
ENSHGLG00000005409	RBM28	100	82.682	ENSECAG00000007745	RBM28	100	83.464	Equus_caballus
ENSHGLG00000005409	RBM28	100	75.229	ENSEEUG00000002389	RBM28	100	75.229	Erinaceus_europaeus
ENSHGLG00000005409	RBM28	100	51.781	ENSELUG00000020602	rbm28	100	51.458	Esox_lucius
ENSHGLG00000005409	RBM28	100	82.976	ENSFCAG00000000946	RBM28	100	95.000	Felis_catus
ENSHGLG00000005409	RBM28	100	93.298	ENSFDAG00000010169	RBM28	100	93.298	Fukomys_damarensis
ENSHGLG00000005409	RBM28	58	52.294	ENSGMOG00000007091	rbm28	99	48.183	Gadus_morhua
ENSHGLG00000005409	RBM28	59	54.810	ENSGAFG00000004802	rbm28	97	54.157	Gambusia_affinis
ENSHGLG00000005409	RBM28	58	54.670	ENSGACG00000012612	rbm28	100	50.991	Gasterosteus_aculeatus
ENSHGLG00000005409	RBM28	83	72.500	ENSGAGG00000008873	RBM28	87	78.022	Gopherus_agassizii
ENSHGLG00000005409	RBM28	95	84.189	ENSGGOG00000004644	RBM28	97	84.743	Gorilla_gorilla
ENSHGLG00000005409	RBM28	91	50.418	ENSHBUG00000009611	rbm28	96	52.078	Haplochromis_burtoni
ENSHGLG00000005409	RBM28	100	100.000	ENSHGLG00100016458	RBM28	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000005409	RBM28	83	47.644	ENSHCOG00000010597	rbm28	99	42.248	Hippocampus_comes
ENSHGLG00000005409	RBM28	56	49.644	ENSIPUG00000007103	rbm28	94	47.119	Ictalurus_punctatus
ENSHGLG00000005409	RBM28	100	84.595	ENSSTOG00000002169	RBM28	100	84.987	Ictidomys_tridecemlineatus
ENSHGLG00000005409	RBM28	100	76.517	ENSJJAG00000022400	Rbm28	100	77.441	Jaculus_jaculus
ENSHGLG00000005409	RBM28	59	53.084	ENSKMAG00000013348	rbm28	99	49.936	Kryptolebias_marmoratus
ENSHGLG00000005409	RBM28	59	54.607	ENSLBEG00000012998	rbm28	100	49.561	Labrus_bergylta
ENSHGLG00000005409	RBM28	74	56.743	ENSLACG00000010485	-	99	57.143	Latimeria_chalumnae
ENSHGLG00000005409	RBM28	100	62.887	ENSLOCG00000015541	rbm28	81	63.402	Lepisosteus_oculatus
ENSHGLG00000005409	RBM28	100	80.952	ENSLAFG00000010717	RBM28	100	80.688	Loxodonta_africana
ENSHGLG00000005409	RBM28	100	84.383	ENSMFAG00000031036	RBM28	100	92.500	Macaca_fascicularis
ENSHGLG00000005409	RBM28	100	84.273	ENSMMUG00000007250	RBM28	100	92.500	Macaca_mulatta
ENSHGLG00000005409	RBM28	100	83.531	ENSMNEG00000036970	RBM28	100	92.500	Macaca_nemestrina
ENSHGLG00000005409	RBM28	84	82.553	ENSMLEG00000037717	RBM28	100	82.979	Mandrillus_leucophaeus
ENSHGLG00000005409	RBM28	100	50.900	ENSMAMG00000008525	rbm28	100	51.226	Mastacembelus_armatus
ENSHGLG00000005409	RBM28	93	49.523	ENSMZEG00005019625	rbm28	100	51.087	Maylandia_zebra
ENSHGLG00000005409	RBM28	100	77.635	ENSMAUG00000002263	Rbm28	100	77.821	Mesocricetus_auratus
ENSHGLG00000005409	RBM28	93	80.748	ENSMICG00000000107	RBM28	100	81.163	Microcebus_murinus
ENSHGLG00000005409	RBM28	100	81.806	ENSMOCG00000014615	Rbm28	100	81.275	Microtus_ochrogaster
ENSHGLG00000005409	RBM28	58	53.793	ENSMMOG00000008600	rbm28	100	50.830	Mola_mola
ENSHGLG00000005409	RBM28	100	70.665	ENSMODG00000015151	RBM28	100	72.157	Monodelphis_domestica
ENSHGLG00000005409	RBM28	59	52.550	ENSMALG00000006419	rbm28	100	48.420	Monopterus_albus
ENSHGLG00000005409	RBM28	100	82.603	MGP_CAROLIEiJ_G0028162	Rbm28	100	81.939	Mus_caroli
ENSHGLG00000005409	RBM28	100	81.758	ENSMUSG00000029701	Rbm28	100	81.758	Mus_musculus
ENSHGLG00000005409	RBM28	100	82.361	MGP_PahariEiJ_G0021920	Rbm28	100	82.228	Mus_pahari
ENSHGLG00000005409	RBM28	100	82.157	MGP_SPRETEiJ_G0029162	Rbm28	100	82.157	Mus_spretus
ENSHGLG00000005409	RBM28	100	81.866	ENSMPUG00000006511	RBM28	100	81.842	Mustela_putorius_furo
ENSHGLG00000005409	RBM28	100	82.415	ENSMLUG00000002186	RBM28	100	83.333	Myotis_lucifugus
ENSHGLG00000005409	RBM28	100	80.697	ENSNGAG00000017946	-	100	80.697	Nannospalax_galili
ENSHGLG00000005409	RBM28	100	81.891	ENSNGAG00000006480	-	100	82.024	Nannospalax_galili
ENSHGLG00000005409	RBM28	100	83.791	ENSNLEG00000012307	RBM28	100	95.000	Nomascus_leucogenys
ENSHGLG00000005409	RBM28	82	83.750	ENSMEUG00000009611	RBM28	90	83.750	Notamacropus_eugenii
ENSHGLG00000005409	RBM28	90	75.000	ENSOPRG00000015140	RBM28	90	76.346	Ochotona_princeps
ENSHGLG00000005409	RBM28	94	72.702	ENSODEG00000013217	-	82	91.688	Octodon_degus
ENSHGLG00000005409	RBM28	100	84.190	ENSODEG00000003213	-	100	84.840	Octodon_degus
ENSHGLG00000005409	RBM28	86	59.406	ENSONIG00000014924	rbm28	100	50.000	Oreochromis_niloticus
ENSHGLG00000005409	RBM28	100	63.255	ENSOANG00000000815	-	100	63.613	Ornithorhynchus_anatinus
ENSHGLG00000005409	RBM28	100	80.443	ENSOCUG00000003009	RBM28	100	80.704	Oryctolagus_cuniculus
ENSHGLG00000005409	RBM28	59	56.109	ENSORLG00000009636	rbm28	99	50.911	Oryzias_latipes
ENSHGLG00000005409	RBM28	59	56.561	ENSORLG00020002123	rbm28	99	51.047	Oryzias_latipes_hni
ENSHGLG00000005409	RBM28	99	59.330	ENSORLG00015015030	rbm28	97	58.454	Oryzias_latipes_hsok
ENSHGLG00000005409	RBM28	59	55.773	ENSOMEG00000007801	rbm28	100	51.484	Oryzias_melastigma
ENSHGLG00000005409	RBM28	94	90.000	ENSOGAG00000006011	RBM28	100	90.000	Otolemur_garnettii
ENSHGLG00000005409	RBM28	100	81.915	ENSOARG00000002547	RBM28	100	81.806	Ovis_aries
ENSHGLG00000005409	RBM28	100	84.666	ENSPPAG00000041730	RBM28	100	95.000	Pan_paniscus
ENSHGLG00000005409	RBM28	100	82.999	ENSPPRG00000004420	RBM28	100	95.000	Panthera_pardus
ENSHGLG00000005409	RBM28	100	83.110	ENSPTIG00000008550	RBM28	100	95.000	Panthera_tigris_altaica
ENSHGLG00000005409	RBM28	100	84.928	ENSPTRG00000019659	RBM28	100	95.000	Pan_troglodytes
ENSHGLG00000005409	RBM28	100	84.142	ENSPANG00000022295	RBM28	100	92.500	Papio_anubis
ENSHGLG00000005409	RBM28	99	50.818	ENSPKIG00000023453	rbm28	99	51.015	Paramormyrops_kingsleyae
ENSHGLG00000005409	RBM28	84	57.767	ENSPMGG00000012840	rbm28	100	48.591	Periophthalmus_magnuspinnatus
ENSHGLG00000005409	RBM28	100	79.211	ENSPEMG00000020673	Rbm28	100	79.973	Peromyscus_maniculatus_bairdii
ENSHGLG00000005409	RBM28	100	70.822	ENSPCIG00000012810	RBM28	100	72.222	Phascolarctos_cinereus
ENSHGLG00000005409	RBM28	59	54.324	ENSPFOG00000018209	rbm28	100	50.000	Poecilia_formosa
ENSHGLG00000005409	RBM28	58	54.018	ENSPLAG00000016078	rbm28	96	49.935	Poecilia_latipinna
ENSHGLG00000005409	RBM28	59	54.967	ENSPMEG00000004292	rbm28	100	50.387	Poecilia_mexicana
ENSHGLG00000005409	RBM28	57	53.968	ENSPREG00000014287	rbm28	98	49.738	Poecilia_reticulata
ENSHGLG00000005409	RBM28	100	85.639	ENSPPYG00000017975	RBM28	100	85.639	Pongo_abelii
ENSHGLG00000005409	RBM28	75	74.930	ENSPCAG00000008223	RBM28	83	75.000	Procavia_capensis
ENSHGLG00000005409	RBM28	90	95.000	ENSPCOG00000016797	RBM28	100	95.000	Propithecus_coquereli
ENSHGLG00000005409	RBM28	78	90.698	ENSPVAG00000005443	RBM28	77	90.698	Pteropus_vampyrus
ENSHGLG00000005409	RBM28	100	50.127	ENSPNYG00000014003	rbm28	100	51.458	Pundamilia_nyererei
ENSHGLG00000005409	RBM28	100	79.630	ENSRNOG00000005468	Rbm28	100	79.630	Rattus_norvegicus
ENSHGLG00000005409	RBM28	100	84.031	ENSRBIG00000033990	RBM28	100	95.000	Rhinopithecus_bieti
ENSHGLG00000005409	RBM28	100	84.404	ENSRROG00000040747	RBM28	100	95.000	Rhinopithecus_roxellana
ENSHGLG00000005409	RBM28	85	79.319	ENSSBOG00000012308	RBM28	100	79.581	Saimiri_boliviensis_boliviensis
ENSHGLG00000005409	RBM28	96	67.822	ENSSHAG00000017017	RBM28	99	67.538	Sarcophilus_harrisii
ENSHGLG00000005409	RBM28	59	56.951	ENSSFOG00015001231	rbm28	100	52.701	Scleropages_formosus
ENSHGLG00000005409	RBM28	59	52.620	ENSSMAG00000003885	rbm28	99	50.830	Scophthalmus_maximus
ENSHGLG00000005409	RBM28	59	55.011	ENSSDUG00000014270	rbm28	97	52.705	Seriola_dumerili
ENSHGLG00000005409	RBM28	59	55.234	ENSSLDG00000020099	rbm28	100	50.063	Seriola_lalandi_dorsalis
ENSHGLG00000005409	RBM28	83	84.264	ENSSARG00000008303	RBM28	78	85.185	Sorex_araneus
ENSHGLG00000005409	RBM28	67	75.000	ENSSPUG00000000838	RBM28	80	75.000	Sphenodon_punctatus
ENSHGLG00000005409	RBM28	58	52.423	ENSSPAG00000023305	rbm28	100	49.452	Stegastes_partitus
ENSHGLG00000005409	RBM28	100	82.609	ENSSSCG00000031847	RBM28	100	82.454	Sus_scrofa
ENSHGLG00000005409	RBM28	60	52.677	ENSTRUG00000013311	rbm28	99	49.369	Takifugu_rubripes
ENSHGLG00000005409	RBM28	99	51.226	ENSTNIG00000017962	rbm28	99	50.839	Tetraodon_nigroviridis
ENSHGLG00000005409	RBM28	86	87.574	ENSTBEG00000012749	RBM28	84	87.888	Tupaia_belangeri
ENSHGLG00000005409	RBM28	100	79.737	ENSTTRG00000013647	RBM28	100	80.000	Tursiops_truncatus
ENSHGLG00000005409	RBM28	100	75.858	ENSUAMG00000006949	RBM28	100	75.989	Ursus_americanus
ENSHGLG00000005409	RBM28	100	83.136	ENSUMAG00000005997	RBM28	100	83.136	Ursus_maritimus
ENSHGLG00000005409	RBM28	88	75.602	ENSVPAG00000008304	RBM28	87	75.799	Vicugna_pacos
ENSHGLG00000005409	RBM28	100	82.846	ENSVVUG00000007270	RBM28	100	83.378	Vulpes_vulpes
ENSHGLG00000005409	RBM28	99	55.097	ENSXETG00000009271	rbm28	99	55.742	Xenopus_tropicalis
ENSHGLG00000005409	RBM28	59	52.232	ENSXCOG00000020357	rbm28	100	50.000	Xiphophorus_couchianus
ENSHGLG00000005409	RBM28	59	53.587	ENSXMAG00000004415	rbm28	100	49.935	Xiphophorus_maculatus