EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000005513 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: La ribonucleoprotein domain family member 4
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 76487 bases
Position: chrJH602129.1:1867764-1944250
Accession: 101698330
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000007596	La	PF05383.17	3.8e-17	1	1
ENSHGLP00000007597	La	PF05383.17	3.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000007682	-	1950	-	ENSHGLP00000007596	650 (aa)	-	-
ENSHGLT00000007683	-	1953	XM_004862982	ENSHGLP00000007597	651 (aa)	XP_004863039	-

Gene Model

Click here to download ENSHGLG00000005513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000005513's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000005513	-	69	75.276	ENSHGLG00000010979	-	93	81.179
ENSHGLG00000005513	-	86	92.473	ENSHGLG00000013875	-	93	91.219
ENSHGLG00000005513	-	99	41.314	ENSHGLG00000012936	LARP4B	82	49.747

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000005513	-	100	85.347	ENSG00000161813	LARP4	100	92.800	Homo_sapiens
ENSHGLG00000005513	-	94	48.447	ENSAPOG00000021331	larp4ab	91	45.985	Acanthochromis_polyacanthus
ENSHGLG00000005513	-	98	51.213	ENSAPOG00000007142	larp4aa	86	50.785	Acanthochromis_polyacanthus
ENSHGLG00000005513	-	99	85.888	ENSAMEG00000001275	LARP4	91	85.888	Ailuropoda_melanoleuca
ENSHGLG00000005513	-	96	47.016	ENSACIG00000001198	larp4aa	94	72.189	Amphilophus_citrinellus
ENSHGLG00000005513	-	94	47.988	ENSAOCG00000006387	larp4ab	91	45.415	Amphiprion_ocellaris
ENSHGLG00000005513	-	56	61.662	ENSAPEG00000015441	larp4ab	98	61.662	Amphiprion_percula
ENSHGLG00000005513	-	99	44.965	ENSATEG00000001018	larp4ab	92	44.823	Anabas_testudineus
ENSHGLG00000005513	-	98	48.580	ENSATEG00000020715	larp4aa	86	47.472	Anabas_testudineus
ENSHGLG00000005513	-	99	69.520	ENSAPLG00000013661	LARP4	91	69.069	Anas_platyrhynchos
ENSHGLG00000005513	-	100	65.574	ENSACAG00000017133	LARP4	89	65.127	Anolis_carolinensis
ENSHGLG00000005513	-	100	83.259	ENSANAG00000029342	LARP4	88	90.107	Aotus_nancymaae
ENSHGLG00000005513	-	57	56.283	ENSACLG00000000777	larp4ab	99	56.283	Astatotilapia_calliptera
ENSHGLG00000005513	-	99	47.183	ENSAMXG00000001515	larp4ab	87	47.844	Astyanax_mexicanus
ENSHGLG00000005513	-	94	52.778	ENSAMXG00000036493	larp4aa	83	52.053	Astyanax_mexicanus
ENSHGLG00000005513	-	100	84.398	ENSBTAG00000017164	LARP4	92	84.398	Bos_taurus
ENSHGLG00000005513	-	100	84.163	ENSCJAG00000021131	LARP4	91	90.335	Callithrix_jacchus
ENSHGLG00000005513	-	100	87.121	ENSCAFG00000008174	LARP4	91	87.121	Canis_familiaris
ENSHGLG00000005513	-	99	87.195	ENSCAFG00020014554	LARP4	91	87.082	Canis_lupus_dingo
ENSHGLG00000005513	-	100	84.695	ENSCHIG00000025965	LARP4	92	84.695	Capra_hircus
ENSHGLG00000005513	-	100	85.671	ENSTSYG00000004342	LARP4	88	91.444	Carlito_syrichta
ENSHGLG00000005513	-	98	69.231	ENSCAPG00000012942	LARP4	90	68.615	Cavia_aperea
ENSHGLG00000005513	-	100	84.418	ENSCPOG00000020519	LARP4	91	84.418	Cavia_porcellus
ENSHGLG00000005513	-	100	83.661	ENSCCAG00000024439	LARP4	88	90.374	Cebus_capucinus
ENSHGLG00000005513	-	99	83.714	ENSCATG00000044528	LARP4	91	83.714	Cercocebus_atys
ENSHGLG00000005513	-	100	91.818	ENSCLAG00000001829	LARP4	91	91.818	Chinchilla_lanigera
ENSHGLG00000005513	-	63	88.571	ENSCHOG00000010490	-	58	88.571	Choloepus_hoffmanni
ENSHGLG00000005513	-	100	70.982	ENSCPBG00000019407	LARP4	83	70.536	Chrysemys_picta_bellii
ENSHGLG00000005513	-	100	77.064	ENSCANG00000033097	-	89	82.510	Colobus_angolensis_palliatus
ENSHGLG00000005513	-	100	85.671	ENSCANG00000029159	-	88	91.979	Colobus_angolensis_palliatus
ENSHGLG00000005513	-	100	83.686	ENSCGRG00001010818	Larp4	91	83.686	Cricetulus_griseus_chok1gshd
ENSHGLG00000005513	-	100	83.510	ENSCGRG00000009382	Larp4	91	83.537	Cricetulus_griseus_crigri
ENSHGLG00000005513	-	67	52.026	ENSCSEG00000003240	larp4ab	82	45.765	Cynoglossus_semilaevis
ENSHGLG00000005513	-	96	49.927	ENSCVAG00000005488	larp4aa	86	49.501	Cyprinodon_variegatus
ENSHGLG00000005513	-	98	48.752	ENSDARG00000074979	larp4ab	85	78.146	Danio_rerio
ENSHGLG00000005513	-	98	48.641	ENSDARG00000078401	larp4aa	86	48.784	Danio_rerio
ENSHGLG00000005513	-	99	84.266	ENSDNOG00000038525	LARP4	91	84.266	Dasypus_novemcinctus
ENSHGLG00000005513	-	100	84.871	ENSDORG00000004013	Larp4	91	84.871	Dipodomys_ordii
ENSHGLG00000005513	-	70	71.642	ENSETEG00000011683	LARP4	65	71.642	Echinops_telfairi
ENSHGLG00000005513	-	79	40.506	ENSEBUG00000004426	LARP4	62	50.136	Eptatretus_burgeri
ENSHGLG00000005513	-	80	40.145	ENSEBUG00000010394	LARP4	89	38.754	Eptatretus_burgeri
ENSHGLG00000005513	-	99	84.569	ENSEASG00005004356	LARP4	98	87.467	Equus_asinus_asinus
ENSHGLG00000005513	-	100	87.443	ENSECAG00000012479	LARP4	91	87.443	Equus_caballus
ENSHGLG00000005513	-	74	98.291	ENSEEUG00000000316	LARP4	68	98.291	Erinaceus_europaeus
ENSHGLG00000005513	-	96	46.606	ENSELUG00000000395	larp4aa	71	60.686	Esox_lucius
ENSHGLG00000005513	-	99	48.902	ENSELUG00000018650	larp4ab	74	74.894	Esox_lucius
ENSHGLG00000005513	-	100	86.576	ENSFCAG00000031897	LARP4	87	92.513	Felis_catus
ENSHGLG00000005513	-	94	66.348	ENSFALG00000002114	LARP4	98	67.547	Ficedula_albicollis
ENSHGLG00000005513	-	100	92.133	ENSFDAG00000006406	-	91	92.133	Fukomys_damarensis
ENSHGLG00000005513	-	97	45.740	ENSFHEG00000013854	larp4ab	89	44.993	Fundulus_heteroclitus
ENSHGLG00000005513	-	51	51.297	ENSGMOG00000009536	-	50	51.297	Gadus_morhua
ENSHGLG00000005513	-	96	50.830	ENSGMOG00000008246	larp4aa	50	61.250	Gadus_morhua
ENSHGLG00000005513	-	100	69.300	ENSGALG00000042122	LARP4	89	68.852	Gallus_gallus
ENSHGLG00000005513	-	99	44.733	ENSGAFG00000021777	larp4ab	91	44.156	Gambusia_affinis
ENSHGLG00000005513	-	97	48.029	ENSGACG00000000680	larp4ab	97	46.198	Gasterosteus_aculeatus
ENSHGLG00000005513	-	97	51.208	ENSGACG00000008381	larp4aa	99	64.191	Gasterosteus_aculeatus
ENSHGLG00000005513	-	100	70.089	ENSGAGG00000006969	LARP4	92	69.643	Gopherus_agassizii
ENSHGLG00000005513	-	100	81.567	ENSGGOG00000015230	LARP4	99	91.644	Gorilla_gorilla
ENSHGLG00000005513	-	59	61.598	ENSHBUG00000023074	larp4aa	84	49.051	Haplochromis_burtoni
ENSHGLG00000005513	-	69	75.276	ENSHGLG00100002832	-	93	81.179	Heterocephalus_glaber_male
ENSHGLG00000005513	-	53	87.464	ENSHGLG00100000622	-	100	91.429	Heterocephalus_glaber_male
ENSHGLG00000005513	-	99	91.793	ENSHGLG00100011678	-	93	90.729	Heterocephalus_glaber_male
ENSHGLG00000005513	-	100	99.389	ENSHGLG00100016984	-	91	99.389	Heterocephalus_glaber_male
ENSHGLG00000005513	-	96	50.297	ENSHCOG00000015951	larp4aa	84	50.297	Hippocampus_comes
ENSHGLG00000005513	-	96	43.628	ENSHCOG00000020857	larp4ab	89	43.223	Hippocampus_comes
ENSHGLG00000005513	-	94	50.533	ENSIPUG00000007514	larp4aa	87	49.441	Ictalurus_punctatus
ENSHGLG00000005513	-	98	48.722	ENSIPUG00000021659	larp4ab	89	48.640	Ictalurus_punctatus
ENSHGLG00000005513	-	100	86.254	ENSSTOG00000003553	LARP4	91	86.254	Ictidomys_tridecemlineatus
ENSHGLG00000005513	-	56	69.106	ENSJJAG00000014649	-	95	85.714	Jaculus_jaculus
ENSHGLG00000005513	-	99	45.809	ENSKMAG00000018556	larp4ab	92	46.098	Kryptolebias_marmoratus
ENSHGLG00000005513	-	97	46.746	ENSLBEG00000019306	larp4ab	89	46.450	Labrus_bergylta
ENSHGLG00000005513	-	96	48.851	ENSLBEG00000014537	larp4aa	83	48.563	Labrus_bergylta
ENSHGLG00000005513	-	99	58.126	ENSLACG00000019090	LARP4	91	57.247	Latimeria_chalumnae
ENSHGLG00000005513	-	94	53.846	ENSLOCG00000007113	larp4ab	83	54.328	Lepisosteus_oculatus
ENSHGLG00000005513	-	100	84.743	ENSLAFG00000005160	LARP4	91	85.084	Loxodonta_africana
ENSHGLG00000005513	-	100	85.299	ENSMFAG00000043681	LARP4	88	92.246	Macaca_fascicularis
ENSHGLG00000005513	-	100	85.202	ENSMMUG00000008172	LARP4	88	92.246	Macaca_mulatta
ENSHGLG00000005513	-	85	68.889	ENSMNEG00000037799	-	99	74.731	Macaca_nemestrina
ENSHGLG00000005513	-	92	86.020	ENSMNEG00000034602	LARP4	90	85.592	Macaca_nemestrina
ENSHGLG00000005513	-	100	85.822	ENSMLEG00000039661	LARP4	88	91.979	Mandrillus_leucophaeus
ENSHGLG00000005513	-	98	48.291	ENSMAMG00000011206	larp4aa	86	47.458	Mastacembelus_armatus
ENSHGLG00000005513	-	99	46.011	ENSMAMG00000002616	larp4ab	91	46.154	Mastacembelus_armatus
ENSHGLG00000005513	-	57	56.283	ENSMZEG00005007771	larp4ab	99	56.283	Maylandia_zebra
ENSHGLG00000005513	-	99	68.955	ENSMGAG00000010598	LARP4	89	68.507	Meleagris_gallopavo
ENSHGLG00000005513	-	86	85.515	ENSMICG00000012388	-	88	88.827	Microcebus_murinus
ENSHGLG00000005513	-	99	79.726	ENSMICG00000030156	-	90	82.990	Microcebus_murinus
ENSHGLG00000005513	-	100	83.233	ENSMOCG00000020635	Larp4	91	83.233	Microtus_ochrogaster
ENSHGLG00000005513	-	98	45.468	ENSMMOG00000021861	larp4ab	94	52.926	Mola_mola
ENSHGLG00000005513	-	96	48.449	ENSMMOG00000004785	larp4aa	84	47.710	Mola_mola
ENSHGLG00000005513	-	100	75.946	MGP_CAROLIEiJ_G0020281	Larp4	85	89.394	Mus_caroli
ENSHGLG00000005513	-	100	84.139	ENSMUSG00000023025	Larp4	99	83.197	Mus_musculus
ENSHGLG00000005513	-	100	84.592	MGP_PahariEiJ_G0020284	Larp4	91	84.592	Mus_pahari
ENSHGLG00000005513	-	99	86.322	ENSMPUG00000008706	LARP4	88	86.322	Mustela_putorius_furo
ENSHGLG00000005513	-	100	82.956	ENSMLUG00000012513	-	91	82.956	Myotis_lucifugus
ENSHGLG00000005513	-	100	84.139	ENSNGAG00000001577	-	92	84.139	Nannospalax_galili
ENSHGLG00000005513	-	96	47.708	ENSNBRG00000011292	larp4aa	84	49.125	Neolamprologus_brichardi
ENSHGLG00000005513	-	57	56.267	ENSNBRG00000015675	larp4ab	99	56.267	Neolamprologus_brichardi
ENSHGLG00000005513	-	100	85.801	ENSNLEG00000017798	LARP4	88	91.176	Nomascus_leucogenys
ENSHGLG00000005513	-	73	72.800	ENSOPRG00000004592	-	80	72.800	Ochotona_princeps
ENSHGLG00000005513	-	99	86.107	ENSODEG00000009770	LARP4	91	86.107	Octodon_degus
ENSHGLG00000005513	-	97	49.263	ENSONIG00000011895	larp4aa	88	49.558	Oreochromis_niloticus
ENSHGLG00000005513	-	98	45.022	ENSONIG00000019124	larp4ab	89	44.807	Oreochromis_niloticus
ENSHGLG00000005513	-	79	74.570	ENSOANG00000004373	LARP4	94	73.996	Ornithorhynchus_anatinus
ENSHGLG00000005513	-	100	83.258	ENSOCUG00000026872	-	91	83.258	Oryctolagus_cuniculus
ENSHGLG00000005513	-	100	84.314	ENSOCUG00000021417	-	91	84.314	Oryctolagus_cuniculus
ENSHGLG00000005513	-	96	51.560	ENSORLG00000006758	larp4aa	84	50.966	Oryzias_latipes
ENSHGLG00000005513	-	96	50.963	ENSORLG00020010258	larp4aa	84	51.039	Oryzias_latipes_hni
ENSHGLG00000005513	-	96	51.263	ENSORLG00015002292	larp4aa	84	51.339	Oryzias_latipes_hsok
ENSHGLG00000005513	-	96	52.388	ENSOMEG00000019749	larp4aa	97	66.575	Oryzias_melastigma
ENSHGLG00000005513	-	78	87.160	ENSOGAG00000001415	LARP4	99	87.160	Otolemur_garnettii
ENSHGLG00000005513	-	100	84.352	ENSOARG00000017702	LARP4	91	84.352	Ovis_aries
ENSHGLG00000005513	-	89	89.569	ENSPPAG00000035100	LARP4	90	90.642	Pan_paniscus
ENSHGLG00000005513	-	69	71.082	ENSPPAG00000039122	-	96	75.426	Pan_paniscus
ENSHGLG00000005513	-	100	86.576	ENSPPRG00000004522	LARP4	87	92.513	Panthera_pardus
ENSHGLG00000005513	-	100	86.576	ENSPTIG00000015617	LARP4	87	92.513	Panthera_tigris_altaica
ENSHGLG00000005513	-	100	85.370	ENSPTRG00000004935	LARP4	88	90.909	Pan_troglodytes
ENSHGLG00000005513	-	69	70.861	ENSPTRG00000045907	-	98	77.507	Pan_troglodytes
ENSHGLG00000005513	-	100	85.052	ENSPANG00000022964	LARP4	88	91.979	Papio_anubis
ENSHGLG00000005513	-	98	52.250	ENSPKIG00000005950	larp4ab	87	49.857	Paramormyrops_kingsleyae
ENSHGLG00000005513	-	100	69.552	ENSPSIG00000015867	LARP4	91	69.162	Pelodiscus_sinensis
ENSHGLG00000005513	-	56	55.348	ENSPMGG00000002719	larp4ab	98	55.348	Periophthalmus_magnuspinnatus
ENSHGLG00000005513	-	99	77.828	ENSPEMG00000018433	Larp4	91	77.828	Peromyscus_maniculatus_bairdii
ENSHGLG00000005513	-	100	74.107	ENSPCIG00000000384	LARP4	92	73.661	Phascolarctos_cinereus
ENSHGLG00000005513	-	98	49.716	ENSPFOG00000013148	larp4aa	93	49.775	Poecilia_formosa
ENSHGLG00000005513	-	99	45.401	ENSPFOG00000009764	larp4ab	91	44.672	Poecilia_formosa
ENSHGLG00000005513	-	99	45.255	ENSPLAG00000008502	larp4ab	91	44.526	Poecilia_latipinna
ENSHGLG00000005513	-	98	49.716	ENSPLAG00000013626	larp4aa	86	49.716	Poecilia_latipinna
ENSHGLG00000005513	-	98	49.716	ENSPMEG00000014271	larp4aa	86	49.716	Poecilia_mexicana
ENSHGLG00000005513	-	99	45.152	ENSPMEG00000002720	larp4ab	91	44.284	Poecilia_mexicana
ENSHGLG00000005513	-	98	50.000	ENSPREG00000022597	larp4aa	86	50.571	Poecilia_reticulata
ENSHGLG00000005513	-	57	59.309	ENSPREG00000016263	larp4ab	97	58.886	Poecilia_reticulata
ENSHGLG00000005513	-	79	88.760	ENSPPYG00000004512	-	100	88.760	Pongo_abelii
ENSHGLG00000005513	-	92	75.822	ENSPCAG00000003671	LARP4	90	75.822	Procavia_capensis
ENSHGLG00000005513	-	86	90.080	ENSPCOG00000026291	LARP4	88	91.078	Propithecus_coquereli
ENSHGLG00000005513	-	88	77.949	ENSPVAG00000016840	LARP4	82	77.949	Pteropus_vampyrus
ENSHGLG00000005513	-	94	50.233	ENSPNAG00000014478	larp4ab	89	49.138	Pygocentrus_nattereri
ENSHGLG00000005513	-	94	52.941	ENSPNAG00000024770	larp4aa	86	52.283	Pygocentrus_nattereri
ENSHGLG00000005513	-	88	73.981	ENSRBIG00000036890	-	89	73.981	Rhinopithecus_bieti
ENSHGLG00000005513	-	100	77.660	ENSRBIG00000038857	-	99	90.930	Rhinopithecus_bieti
ENSHGLG00000005513	-	100	84.858	ENSRROG00000042764	-	99	91.156	Rhinopithecus_roxellana
ENSHGLG00000005513	-	100	75.680	ENSRROG00000025487	-	95	75.680	Rhinopithecus_roxellana
ENSHGLG00000005513	-	100	82.956	ENSSBOG00000026650	LARP4	88	89.840	Saimiri_boliviensis_boliviensis
ENSHGLG00000005513	-	52	83.673	ENSSHAG00000013246	-	99	83.776	Sarcophilus_harrisii
ENSHGLG00000005513	-	97	52.200	ENSSFOG00015003868	larp4aa	89	51.267	Scleropages_formosus
ENSHGLG00000005513	-	99	50.000	ENSSFOG00015014096	larp4ab	91	49.573	Scleropages_formosus
ENSHGLG00000005513	-	77	55.747	ENSSMAG00000002838	larp4ab	92	47.863	Scophthalmus_maximus
ENSHGLG00000005513	-	94	48.615	ENSSDUG00000006655	larp4ab	89	48.235	Seriola_dumerili
ENSHGLG00000005513	-	94	48.640	ENSSLDG00000001791	larp4ab	89	47.826	Seriola_lalandi_dorsalis
ENSHGLG00000005513	-	99	80.090	ENSSARG00000012469	LARP4	91	80.090	Sorex_araneus
ENSHGLG00000005513	-	100	67.061	ENSSPUG00000016552	LARP4	91	67.404	Sphenodon_punctatus
ENSHGLG00000005513	-	94	48.602	ENSSPAG00000002172	larp4ab	89	46.429	Stegastes_partitus
ENSHGLG00000005513	-	98	50.000	ENSSPAG00000007222	larp4aa	98	64.946	Stegastes_partitus
ENSHGLG00000005513	-	100	86.145	ENSSSCG00000028516	LARP4	87	92.084	Sus_scrofa
ENSHGLG00000005513	-	100	67.016	ENSTGUG00000003479	LARP4	91	67.466	Taeniopygia_guttata
ENSHGLG00000005513	-	55	59.392	ENSTRUG00000015939	larp4aa	100	59.392	Takifugu_rubripes
ENSHGLG00000005513	-	99	45.387	ENSTNIG00000014571	larp4ab	91	45.238	Tetraodon_nigroviridis
ENSHGLG00000005513	-	98	47.789	ENSTNIG00000015109	larp4aa	50	61.299	Tetraodon_nigroviridis
ENSHGLG00000005513	-	99	73.112	ENSTBEG00000005167	LARP4	91	73.112	Tupaia_belangeri
ENSHGLG00000005513	-	100	83.383	ENSTTRG00000003764	LARP4	91	84.012	Tursiops_truncatus
ENSHGLG00000005513	-	80	88.803	ENSUAMG00000013764	LARP4	99	90.930	Ursus_americanus
ENSHGLG00000005513	-	100	85.801	ENSUMAG00000008473	LARP4	91	85.801	Ursus_maritimus
ENSHGLG00000005513	-	100	84.398	ENSVPAG00000010136	LARP4	92	83.976	Vicugna_pacos
ENSHGLG00000005513	-	100	86.536	ENSVVUG00000024717	LARP4	86	92.593	Vulpes_vulpes
ENSHGLG00000005513	-	92	60.194	ENSXETG00000007283	larp4	90	58.738	Xenopus_tropicalis
ENSHGLG00000005513	-	57	58.947	ENSXCOG00000019635	larp4ab	97	58.947	Xiphophorus_couchianus
ENSHGLG00000005513	-	99	45.507	ENSXMAG00000002156	larp4ab	91	44.928	Xiphophorus_maculatus