EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000005832 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 1217 bases
Position: chrJH602100.1:6630864-6632080
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000008052	RRM_1	PF00076.22	1.5e-13	1	1
ENSHGLP00000008052	RRM_3	PF08777.11	3.5e-29	1	1
ENSHGLP00000008052	La	PF05383.17	3.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000008140	-	1155	-	ENSHGLP00000008052	384 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000005832's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000005832's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000005832	-	100	88.107	ENSHGLG00000017580	-	100	88.107
ENSHGLG00000005832	-	100	82.266	ENSHGLG00000004478	-	100	82.266

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000005832	-	100	85.539	ENSG00000138385	SSB	100	91.667	Homo_sapiens
ENSHGLG00000005832	-	98	51.414	ENSAPOG00000003448	ssb	100	51.908	Acanthochromis_polyacanthus
ENSHGLG00000005832	-	100	82.619	ENSAMEG00000010507	SSB	100	82.619	Ailuropoda_melanoleuca
ENSHGLG00000005832	-	95	52.406	ENSACIG00000001738	ssb	97	52.406	Amphilophus_citrinellus
ENSHGLG00000005832	-	98	51.671	ENSAOCG00000020398	ssb	100	52.417	Amphiprion_ocellaris
ENSHGLG00000005832	-	98	51.928	ENSAPEG00000020395	ssb	100	52.672	Amphiprion_percula
ENSHGLG00000005832	-	99	52.488	ENSATEG00000016884	ssb	100	52.985	Anabas_testudineus
ENSHGLG00000005832	-	100	63.294	ENSAPLG00000006109	SSB	100	64.789	Anas_platyrhynchos
ENSHGLG00000005832	-	100	60.488	ENSACAG00000017008	SSB	99	61.463	Anolis_carolinensis
ENSHGLG00000005832	-	100	76.296	ENSANAG00000027195	-	100	76.296	Aotus_nancymaae
ENSHGLG00000005832	-	99	48.387	ENSACLG00000010798	ssb	100	48.139	Astatotilapia_calliptera
ENSHGLG00000005832	-	98	48.775	ENSAMXG00000012606	ssb	94	51.795	Astyanax_mexicanus
ENSHGLG00000005832	-	100	86.386	ENSBTAG00000008716	SSB	100	86.386	Bos_taurus
ENSHGLG00000005832	-	75	31.894	WBGene00016653	C44E4.4	95	31.675	Caenorhabditis_elegans
ENSHGLG00000005832	-	100	85.185	ENSCJAG00000045073	SSB	100	85.185	Callithrix_jacchus
ENSHGLG00000005832	-	100	85.961	ENSCAFG00000012418	SSB	100	85.961	Canis_familiaris
ENSHGLG00000005832	-	100	85.961	ENSCAFG00020002900	SSB	100	85.961	Canis_lupus_dingo
ENSHGLG00000005832	-	100	86.173	ENSCHIG00000022624	-	100	86.173	Capra_hircus
ENSHGLG00000005832	-	100	81.235	ENSCHIG00000022196	-	100	81.235	Capra_hircus
ENSHGLG00000005832	-	100	86.420	ENSTSYG00000000097	SSB	100	86.420	Carlito_syrichta
ENSHGLG00000005832	-	100	88.395	ENSCPOG00000003338	SSB	100	88.395	Cavia_porcellus
ENSHGLG00000005832	-	100	85.679	ENSCCAG00000035147	SSB	100	85.679	Cebus_capucinus
ENSHGLG00000005832	-	100	65.239	ENSCATG00000042909	-	100	65.239	Cercocebus_atys
ENSHGLG00000005832	-	100	66.667	ENSCATG00000036701	SSB	100	66.667	Cercocebus_atys
ENSHGLG00000005832	-	100	88.395	ENSCLAG00000015617	-	100	88.395	Chinchilla_lanigera
ENSHGLG00000005832	-	97	81.266	ENSCSAG00000018390	-	96	81.266	Chlorocebus_sabaeus
ENSHGLG00000005832	-	100	85.679	ENSCSAG00000015200	SSB	89	85.679	Chlorocebus_sabaeus
ENSHGLG00000005832	-	100	85.679	ENSCHOG00000007763	SSB	100	85.679	Choloepus_hoffmanni
ENSHGLG00000005832	-	100	70.171	ENSCPBG00000006519	SSB	100	71.149	Chrysemys_picta_bellii
ENSHGLG00000005832	-	97	69.895	ENSCANG00000028838	-	91	69.895	Colobus_angolensis_palliatus
ENSHGLG00000005832	-	100	85.679	ENSCANG00000027695	SSB	100	85.679	Colobus_angolensis_palliatus
ENSHGLG00000005832	-	100	75.819	ENSCANG00000033240	-	100	75.819	Colobus_angolensis_palliatus
ENSHGLG00000005832	-	100	71.324	ENSCGRG00001024831	Ssb	100	72.549	Cricetulus_griseus_chok1gshd
ENSHGLG00000005832	-	100	71.324	ENSCGRG00000005387	Ssb	100	72.549	Cricetulus_griseus_crigri
ENSHGLG00000005832	-	98	50.882	ENSCSEG00000011599	ssb	99	51.637	Cynoglossus_semilaevis
ENSHGLG00000005832	-	99	51.613	ENSCVAG00000021558	ssb	100	52.109	Cyprinodon_variegatus
ENSHGLG00000005832	-	98	51.372	ENSDARG00000029252	ssb	99	51.372	Danio_rerio
ENSHGLG00000005832	-	100	85.926	ENSDNOG00000013450	SSB	100	85.926	Dasypus_novemcinctus
ENSHGLG00000005832	-	100	77.696	ENSDORG00000005543	Ssb	100	77.696	Dipodomys_ordii
ENSHGLG00000005832	-	86	32.845	FBgn0011638	La	86	33.626	Drosophila_melanogaster
ENSHGLG00000005832	-	50	84.080	ENSETEG00000004614	-	52	84.080	Echinops_telfairi
ENSHGLG00000005832	-	96	44.503	ENSEBUG00000001237	ssb	92	46.328	Eptatretus_burgeri
ENSHGLG00000005832	-	100	86.667	ENSEASG00005022835	SSB	100	86.667	Equus_asinus_asinus
ENSHGLG00000005832	-	100	86.914	ENSECAG00000018495	SSB	100	86.914	Equus_caballus
ENSHGLG00000005832	-	78	69.281	ENSEEUG00000008077	SSB	78	69.281	Erinaceus_europaeus
ENSHGLG00000005832	-	99	53.333	ENSELUG00000020929	ssb	97	54.684	Esox_lucius
ENSHGLG00000005832	-	100	85.468	ENSFCAG00000011601	SSB	100	85.468	Felis_catus
ENSHGLG00000005832	-	100	66.176	ENSFALG00000000930	SSB	100	67.322	Ficedula_albicollis
ENSHGLG00000005832	-	100	89.136	ENSFDAG00000000598	SSB	100	89.136	Fukomys_damarensis
ENSHGLG00000005832	-	74	49.338	ENSFHEG00000003268	ssb	95	49.515	Fundulus_heteroclitus
ENSHGLG00000005832	-	97	49.749	ENSGMOG00000002664	ssb	99	50.251	Gadus_morhua
ENSHGLG00000005832	-	100	67.157	ENSGALG00000009677	SSB	100	67.157	Gallus_gallus
ENSHGLG00000005832	-	99	49.015	ENSGAFG00000002749	ssb	97	50.761	Gambusia_affinis
ENSHGLG00000005832	-	99	48.649	ENSGACG00000005107	ssb	100	49.265	Gasterosteus_aculeatus
ENSHGLG00000005832	-	100	70.416	ENSGAGG00000007807	SSB	100	71.149	Gopherus_agassizii
ENSHGLG00000005832	-	52	80.000	ENSGGOG00000023471	-	92	80.000	Gorilla_gorilla
ENSHGLG00000005832	-	100	71.464	ENSGGOG00000024891	-	100	71.464	Gorilla_gorilla
ENSHGLG00000005832	-	99	48.000	ENSHBUG00000006584	ssb	100	47.891	Haplochromis_burtoni
ENSHGLG00000005832	-	100	88.107	ENSHGLG00100003084	-	100	88.107	Heterocephalus_glaber_male
ENSHGLG00000005832	-	100	77.694	ENSHGLG00100008767	-	100	77.694	Heterocephalus_glaber_male
ENSHGLG00000005832	-	97	48.861	ENSHCOG00000019011	ssb	99	49.114	Hippocampus_comes
ENSHGLG00000005832	-	97	51.493	ENSIPUG00000003681	SSB	92	54.450	Ictalurus_punctatus
ENSHGLG00000005832	-	100	86.914	ENSSTOG00000008416	SSB	100	86.914	Ictidomys_tridecemlineatus
ENSHGLG00000005832	-	100	74.341	ENSJJAG00000023158	-	100	74.341	Jaculus_jaculus
ENSHGLG00000005832	-	99	65.979	ENSJJAG00000016250	-	99	65.979	Jaculus_jaculus
ENSHGLG00000005832	-	99	50.374	ENSKMAG00000017317	ssb	100	50.873	Kryptolebias_marmoratus
ENSHGLG00000005832	-	98	50.380	ENSLBEG00000017345	ssb	100	51.378	Labrus_bergylta
ENSHGLG00000005832	-	99	59.951	ENSLACG00000014056	SSB	99	62.500	Latimeria_chalumnae
ENSHGLG00000005832	-	98	58.354	ENSLOCG00000007933	ssb	99	58.853	Lepisosteus_oculatus
ENSHGLG00000005832	-	77	68.581	ENSLAFG00000026721	-	99	68.581	Loxodonta_africana
ENSHGLG00000005832	-	100	71.852	ENSLAFG00000028909	-	100	71.852	Loxodonta_africana
ENSHGLG00000005832	-	100	80.569	ENSLAFG00000000867	-	100	81.043	Loxodonta_africana
ENSHGLG00000005832	-	91	79.370	ENSMFAG00000041478	-	100	79.370	Macaca_fascicularis
ENSHGLG00000005832	-	100	85.926	ENSMFAG00000039066	SSB	100	85.926	Macaca_fascicularis
ENSHGLG00000005832	-	100	85.926	ENSMMUG00000023051	SSB	100	85.926	Macaca_mulatta
ENSHGLG00000005832	-	99	61.266	ENSMMUG00000039889	-	100	61.266	Macaca_mulatta
ENSHGLG00000005832	-	100	75.819	ENSMMUG00000011724	-	97	75.819	Macaca_mulatta
ENSHGLG00000005832	-	91	79.370	ENSMNEG00000034698	-	100	79.370	Macaca_nemestrina
ENSHGLG00000005832	-	100	74.146	ENSMNEG00000028321	SSB	85	93.043	Macaca_nemestrina
ENSHGLG00000005832	-	100	85.926	ENSMLEG00000035717	SSB	100	85.926	Mandrillus_leucophaeus
ENSHGLG00000005832	-	100	63.224	ENSMLEG00000042644	-	100	63.224	Mandrillus_leucophaeus
ENSHGLG00000005832	-	99	52.868	ENSMAMG00000004800	ssb	100	53.367	Mastacembelus_armatus
ENSHGLG00000005832	-	99	48.387	ENSMZEG00005005749	ssb	100	48.139	Maylandia_zebra
ENSHGLG00000005832	-	100	66.422	ENSMGAG00000010328	SSB	99	68.966	Meleagris_gallopavo
ENSHGLG00000005832	-	97	84.718	ENSMICG00000033304	-	93	88.483	Microcebus_murinus
ENSHGLG00000005832	-	99	87.097	ENSMICG00000028252	-	99	87.097	Microcebus_murinus
ENSHGLG00000005832	-	100	61.209	ENSMODG00000007027	-	100	61.209	Monodelphis_domestica
ENSHGLG00000005832	-	100	70.631	ENSMODG00000008227	-	100	71.533	Monodelphis_domestica
ENSHGLG00000005832	-	100	63.980	ENSMODG00000019271	-	100	64.322	Monodelphis_domestica
ENSHGLG00000005832	-	93	52.355	ENSMALG00000008045	ssb	90	54.111	Monopterus_albus
ENSHGLG00000005832	-	100	70.913	MGP_CAROLIEiJ_G0023629	-	100	85.326	Mus_caroli
ENSHGLG00000005832	-	100	70.433	ENSMUSG00000068882	Ssb	100	85.326	Mus_musculus
ENSHGLG00000005832	-	100	70.913	MGP_PahariEiJ_G0025081	-	100	86.413	Mus_pahari
ENSHGLG00000005832	-	100	70.433	MGP_SPRETEiJ_G0024551	Ssb	100	85.326	Mus_spretus
ENSHGLG00000005832	-	100	86.173	ENSMPUG00000000785	SSB	100	86.173	Mustela_putorius_furo
ENSHGLG00000005832	-	100	81.429	ENSMLUG00000016316	SSB	100	81.429	Myotis_lucifugus
ENSHGLG00000005832	-	99	48.130	ENSNBRG00000012661	ssb	100	47.880	Neolamprologus_brichardi
ENSHGLG00000005832	-	100	86.173	ENSNLEG00000004958	SSB	100	86.173	Nomascus_leucogenys
ENSHGLG00000005832	-	100	63.547	ENSNLEG00000028754	-	100	63.793	Nomascus_leucogenys
ENSHGLG00000005832	-	63	79.839	ENSMEUG00000001650	-	100	79.839	Notamacropus_eugenii
ENSHGLG00000005832	-	70	60.345	ENSOPRG00000008475	-	100	64.483	Ochotona_princeps
ENSHGLG00000005832	-	93	82.880	ENSODEG00000004202	-	100	82.880	Octodon_degus
ENSHGLG00000005832	-	99	48.878	ENSONIG00000008776	ssb	100	48.628	Oreochromis_niloticus
ENSHGLG00000005832	-	100	75.556	ENSOANG00000008543	SSB	100	75.556	Ornithorhynchus_anatinus
ENSHGLG00000005832	-	100	86.173	ENSOCUG00000010396	SSB	100	86.173	Oryctolagus_cuniculus
ENSHGLG00000005832	-	99	52.605	ENSORLG00000017208	ssb	100	52.854	Oryzias_latipes
ENSHGLG00000005832	-	99	52.723	ENSORLG00020022574	ssb	100	52.970	Oryzias_latipes_hni
ENSHGLG00000005832	-	99	52.357	ENSORLG00015016592	ssb	100	52.605	Oryzias_latipes_hsok
ENSHGLG00000005832	-	98	51.880	ENSOMEG00000003193	ssb	100	52.854	Oryzias_melastigma
ENSHGLG00000005832	-	100	81.280	ENSOGAG00000029768	SSB	100	81.280	Otolemur_garnettii
ENSHGLG00000005832	-	100	85.679	ENSOARG00000002906	SSB	100	85.679	Ovis_aries
ENSHGLG00000005832	-	100	85.539	ENSPPAG00000042673	SSB	100	85.539	Pan_paniscus
ENSHGLG00000005832	-	100	71.537	ENSPPAG00000032427	-	99	82.812	Pan_paniscus
ENSHGLG00000005832	-	97	67.005	ENSPPAG00000006189	-	93	71.547	Pan_paniscus
ENSHGLG00000005832	-	100	85.468	ENSPPRG00000006599	SSB	100	85.468	Panthera_pardus
ENSHGLG00000005832	-	100	85.222	ENSPTIG00000011021	SSB	97	85.222	Panthera_tigris_altaica
ENSHGLG00000005832	-	100	85.539	ENSPTRG00000012620	SSB	100	85.539	Pan_troglodytes
ENSHGLG00000005832	-	100	68.262	ENSPTRG00000042880	-	100	68.262	Pan_troglodytes
ENSHGLG00000005832	-	100	62.312	ENSPANG00000034126	-	100	62.035	Papio_anubis
ENSHGLG00000005832	-	100	85.926	ENSPANG00000007440	SSB	100	85.926	Papio_anubis
ENSHGLG00000005832	-	99	63.588	ENSPANG00000031877	-	92	63.588	Papio_anubis
ENSHGLG00000005832	-	98	55.750	ENSPKIG00000019325	ssb	99	56.683	Paramormyrops_kingsleyae
ENSHGLG00000005832	-	100	66.748	ENSPSIG00000002265	SSB	93	68.460	Pelodiscus_sinensis
ENSHGLG00000005832	-	87	49.570	ENSPMGG00000020075	ssb	92	49.857	Periophthalmus_magnuspinnatus
ENSHGLG00000005832	-	83	46.933	ENSPMAG00000002982	ssb	90	45.337	Petromyzon_marinus
ENSHGLG00000005832	-	100	75.123	ENSPCIG00000028591	-	100	75.676	Phascolarctos_cinereus
ENSHGLG00000005832	-	99	50.620	ENSPFOG00000009650	ssb	100	51.613	Poecilia_formosa
ENSHGLG00000005832	-	99	50.372	ENSPLAG00000020498	ssb	100	51.613	Poecilia_latipinna
ENSHGLG00000005832	-	99	50.124	ENSPMEG00000001051	ssb	100	51.365	Poecilia_mexicana
ENSHGLG00000005832	-	97	51.042	ENSPREG00000003708	ssb	99	52.083	Poecilia_reticulata
ENSHGLG00000005832	-	100	86.173	ENSPPYG00000012919	SSB	100	86.173	Pongo_abelii
ENSHGLG00000005832	-	94	81.723	ENSPCAG00000010276	SSB	100	81.723	Procavia_capensis
ENSHGLG00000005832	-	100	76.049	ENSPCOG00000023189	-	100	76.049	Propithecus_coquereli
ENSHGLG00000005832	-	100	84.250	ENSPCOG00000015741	-	100	84.250	Propithecus_coquereli
ENSHGLG00000005832	-	90	88.701	ENSPVAG00000006615	SSB	100	88.701	Pteropus_vampyrus
ENSHGLG00000005832	-	99	48.387	ENSPNYG00000006444	ssb	100	48.139	Pundamilia_nyererei
ENSHGLG00000005832	-	92	53.315	ENSPNAG00000011708	ssb	94	53.728	Pygocentrus_nattereri
ENSHGLG00000005832	-	100	71.464	ENSRNOG00000011606	AABR07061825.1	100	71.464	Rattus_norvegicus
ENSHGLG00000005832	-	100	70.673	ENSRNOG00000007998	Ssb	100	70.673	Rattus_norvegicus
ENSHGLG00000005832	-	93	73.854	ENSRBIG00000041232	-	98	73.854	Rhinopithecus_bieti
ENSHGLG00000005832	-	88	77.348	ENSRBIG00000041608	-	98	77.348	Rhinopithecus_bieti
ENSHGLG00000005832	-	100	73.383	ENSRBIG00000041972	SSB	88	93.043	Rhinopithecus_bieti
ENSHGLG00000005832	-	100	62.562	ENSRBIG00000029918	-	100	62.562	Rhinopithecus_bieti
ENSHGLG00000005832	-	100	70.443	ENSRROG00000007149	-	100	70.443	Rhinopithecus_roxellana
ENSHGLG00000005832	-	100	85.679	ENSRROG00000040346	SSB	100	85.679	Rhinopithecus_roxellana
ENSHGLG00000005832	-	88	81.768	ENSRROG00000034102	-	94	78.182	Rhinopithecus_roxellana
ENSHGLG00000005832	-	98	74.485	ENSRROG00000031684	-	100	74.485	Rhinopithecus_roxellana
ENSHGLG00000005832	-	100	86.173	ENSSBOG00000027204	SSB	100	86.173	Saimiri_boliviensis_boliviensis
ENSHGLG00000005832	-	100	74.693	ENSSHAG00000018062	SSB	100	74.939	Sarcophilus_harrisii
ENSHGLG00000005832	-	99	57.908	ENSSFOG00015000550	ssb	95	59.439	Scleropages_formosus
ENSHGLG00000005832	-	98	49.610	ENSSMAG00000013885	ssb	99	51.979	Scophthalmus_maximus
ENSHGLG00000005832	-	99	51.621	ENSSDUG00000020117	ssb	100	51.870	Seriola_dumerili
ENSHGLG00000005832	-	99	50.769	ENSSLDG00000002525	ssb	100	50.769	Seriola_lalandi_dorsalis
ENSHGLG00000005832	-	94	77.285	ENSSARG00000007747	SSB	100	77.285	Sorex_araneus
ENSHGLG00000005832	-	100	68.796	ENSSPUG00000012112	SSB	100	68.796	Sphenodon_punctatus
ENSHGLG00000005832	-	98	51.671	ENSSPAG00000005696	ssb	100	52.417	Stegastes_partitus
ENSHGLG00000005832	-	97	73.491	ENSSSCG00000015938	SSB	94	74.084	Sus_scrofa
ENSHGLG00000005832	-	100	67.237	ENSTGUG00000007942	SSB	100	67.237	Taeniopygia_guttata
ENSHGLG00000005832	-	99	51.378	ENSTRUG00000017839	ssb	100	52.000	Takifugu_rubripes
ENSHGLG00000005832	-	93	53.533	ENSTNIG00000000915	ssb	100	53.533	Tetraodon_nigroviridis
ENSHGLG00000005832	-	82	93.043	ENSTBEG00000009056	SSB	82	93.043	Tupaia_belangeri
ENSHGLG00000005832	-	100	84.975	ENSTTRG00000002152	SSB	100	84.975	Tursiops_truncatus
ENSHGLG00000005832	-	96	89.125	ENSUAMG00000027833	SSB	99	89.125	Ursus_americanus
ENSHGLG00000005832	-	100	86.207	ENSUMAG00000013907	SSB	100	86.207	Ursus_maritimus
ENSHGLG00000005832	-	100	87.781	ENSVPAG00000007183	SSB	100	87.781	Vicugna_pacos
ENSHGLG00000005832	-	100	85.961	ENSVVUG00000016573	SSB	78	85.961	Vulpes_vulpes
ENSHGLG00000005832	-	99	55.385	ENSXETG00000025402	ssb	92	57.289	Xenopus_tropicalis
ENSHGLG00000005832	-	97	50.131	ENSXCOG00000019109	ssb	93	57.812	Xiphophorus_couchianus
ENSHGLG00000005832	-	99	51.523	ENSXMAG00000004888	ssb	97	51.777	Xiphophorus_maculatus