EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000005955 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 12904 bases
Position: chrJH602068.1:25700657-25713560
Accession: 101721347
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000008233	SLBP_RNA_bind	PF15247.6	1.5e-29	1	1
ENSHGLP00000008232	SLBP_RNA_bind	PF15247.6	1.8e-29	1	1
ENSHGLP00000008231	SLBP_RNA_bind	PF15247.6	2.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000008322	-	573	-	ENSHGLP00000008233	190 (aa)	-	-
ENSHGLT00000008320	-	717	XM_013073146	ENSHGLP00000008231	238 (aa)	XP_012928600	-
ENSHGLT00000008321	-	657	-	ENSHGLP00000008232	218 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000005955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000005955's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000005955	-	89	80.617	ENSHGLG00000008313	-	100	78.261
ENSHGLG00000005955	-	99	67.347	ENSHGLG00000010461	-	99	77.459

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000005955	-	100	85.417	ENSG00000163950	SLBP	100	85.417	Homo_sapiens
ENSHGLG00000005955	-	82	88.832	ENSAMEG00000016915	SLBP	91	88.832	Ailuropoda_melanoleuca
ENSHGLG00000005955	-	78	55.330	ENSACIG00000022308	slbp	53	66.429	Amphilophus_citrinellus
ENSHGLG00000005955	-	82	74.500	ENSAPLG00000015989	-	91	73.500	Anas_platyrhynchos
ENSHGLG00000005955	-	100	84.167	ENSANAG00000034769	SLBP	100	84.167	Aotus_nancymaae
ENSHGLG00000005955	-	90	56.021	ENSAMXG00000014527	slbp	52	69.718	Astyanax_mexicanus
ENSHGLG00000005955	-	100	73.934	ENSBTAG00000001328	SLBP	100	73.818	Bos_taurus
ENSHGLG00000005955	-	100	81.667	ENSCJAG00000001790	SLBP	100	81.667	Callithrix_jacchus
ENSHGLG00000005955	-	100	76.364	ENSCAFG00000015016	SLBP	100	76.364	Canis_familiaris
ENSHGLG00000005955	-	100	76.364	ENSCAFG00020012334	SLBP	100	76.364	Canis_lupus_dingo
ENSHGLG00000005955	-	100	74.545	ENSCHIG00000019364	SLBP	99	76.226	Capra_hircus
ENSHGLG00000005955	-	100	85.477	ENSTSYG00000000376	SLBP	100	85.477	Carlito_syrichta
ENSHGLG00000005955	-	76	92.265	ENSCAPG00000016340	SLBP	100	92.265	Cavia_aperea
ENSHGLG00000005955	-	100	76.619	ENSCPOG00000000031	SLBP	100	76.619	Cavia_porcellus
ENSHGLG00000005955	-	100	60.633	ENSCCAG00000026134	SLBP	100	60.633	Cebus_capucinus
ENSHGLG00000005955	-	100	83.058	ENSCATG00000029173	SLBP	100	83.058	Cercocebus_atys
ENSHGLG00000005955	-	100	79.487	ENSCLAG00000008157	SLBP	100	79.487	Chinchilla_lanigera
ENSHGLG00000005955	-	100	60.854	ENSCSAG00000015628	SLBP	100	60.854	Chlorocebus_sabaeus
ENSHGLG00000005955	-	100	62.989	ENSCPBG00000000746	SLBP	70	77.778	Chrysemys_picta_bellii
ENSHGLG00000005955	-	82	85.787	ENSCANG00000041008	SLBP	91	85.787	Colobus_angolensis_palliatus
ENSHGLG00000005955	-	100	76.364	ENSCGRG00001009760	-	100	76.364	Cricetulus_griseus_chok1gshd
ENSHGLG00000005955	-	100	74.146	ENSCGRG00001012991	-	100	74.088	Cricetulus_griseus_chok1gshd
ENSHGLG00000005955	-	100	76.364	ENSCGRG00000004506	Slbp	100	76.364	Cricetulus_griseus_crigri
ENSHGLG00000005955	-	91	55.000	ENSDARG00000100558	slbp	54	66.423	Danio_rerio
ENSHGLG00000005955	-	100	71.028	ENSDNOG00000047539	SLBP	100	69.149	Dasypus_novemcinctus
ENSHGLG00000005955	-	82	88.832	ENSDORG00000003028	Slbp	91	88.832	Dipodomys_ordii
ENSHGLG00000005955	-	100	70.000	ENSETEG00000004641	SLBP	99	66.667	Echinops_telfairi
ENSHGLG00000005955	-	76	92.857	ENSEASG00005022714	SLBP	95	92.857	Equus_asinus_asinus
ENSHGLG00000005955	-	100	75.829	ENSECAG00000011689	SLBP	69	75.829	Equus_caballus
ENSHGLG00000005955	-	100	85.774	ENSFCAG00000000169	SLBP	100	86.192	Felis_catus
ENSHGLG00000005955	-	100	61.682	ENSFALG00000010003	-	72	73.232	Ficedula_albicollis
ENSHGLG00000005955	-	93	83.069	ENSFDAG00000007592	SLBP	99	83.794	Fukomys_damarensis
ENSHGLG00000005955	-	59	77.193	ENSGMOG00000015352	slbp	73	77.193	Gadus_morhua
ENSHGLG00000005955	-	100	64.929	ENSGALG00000015712	SLBP	72	73.737	Gallus_gallus
ENSHGLG00000005955	-	59	68.376	ENSGACG00000019596	slbp	50	62.205	Gasterosteus_aculeatus
ENSHGLG00000005955	-	100	62.150	ENSGAGG00000012096	SLBP	89	59.276	Gopherus_agassizii
ENSHGLG00000005955	-	100	85.417	ENSGGOG00000003167	SLBP	100	85.417	Gorilla_gorilla
ENSHGLG00000005955	-	83	80.734	ENSHGLG00100014906	-	99	77.869	Heterocephalus_glaber_male
ENSHGLG00000005955	-	89	81.498	ENSHGLG00100010510	-	100	79.051	Heterocephalus_glaber_male
ENSHGLG00000005955	-	100	87.179	ENSHGLG00100014018	-	100	87.747	Heterocephalus_glaber_male
ENSHGLG00000005955	-	90	53.684	ENSHCOG00000013425	slbp	50	61.429	Hippocampus_comes
ENSHGLG00000005955	-	90	56.383	ENSIPUG00000016780	slbp	53	66.901	Ictalurus_punctatus
ENSHGLG00000005955	-	100	79.273	ENSSTOG00000003262	SLBP	100	79.273	Ictidomys_tridecemlineatus
ENSHGLG00000005955	-	100	77.091	ENSJJAG00000020549	-	100	77.091	Jaculus_jaculus
ENSHGLG00000005955	-	100	75.355	ENSJJAG00000002394	-	100	75.636	Jaculus_jaculus
ENSHGLG00000005955	-	91	51.282	ENSLACG00000014623	SLBP	68	56.771	Latimeria_chalumnae
ENSHGLG00000005955	-	59	70.536	ENSLOCG00000011027	slbp	67	52.239	Lepisosteus_oculatus
ENSHGLG00000005955	-	100	68.981	ENSLAFG00000012933	SLBP	100	69.915	Loxodonta_africana
ENSHGLG00000005955	-	93	87.387	ENSMFAG00000030130	SLBP	95	87.387	Macaca_fascicularis
ENSHGLG00000005955	-	92	88.235	ENSMMUG00000032303	SLBP	96	88.235	Macaca_mulatta
ENSHGLG00000005955	-	100	56.383	ENSMNEG00000008082	SLBP	100	56.383	Macaca_nemestrina
ENSHGLG00000005955	-	94	75.107	ENSMLEG00000024639	SLBP	79	86.294	Mandrillus_leucophaeus
ENSHGLG00000005955	-	82	74.747	ENSMGAG00000013085	SLBP	91	73.737	Meleagris_gallopavo
ENSHGLG00000005955	-	100	76.364	ENSMAUG00000009490	Slbp	100	76.364	Mesocricetus_auratus
ENSHGLG00000005955	-	100	85.000	ENSMICG00000014244	SLBP	100	85.000	Microcebus_murinus
ENSHGLG00000005955	-	100	75.355	ENSMOCG00000015826	Slbp	99	74.909	Microtus_ochrogaster
ENSHGLG00000005955	-	88	54.255	ENSMMOG00000010181	slbp	53	61.111	Mola_mola
ENSHGLG00000005955	-	94	70.051	ENSMODG00000004304	SLBP	99	69.767	Monodelphis_domestica
ENSHGLG00000005955	-	100	76.863	MGP_CAROLIEiJ_G0027117	Slbp	100	76.863	Mus_caroli
ENSHGLG00000005955	-	100	77.255	ENSMUSG00000004642	Slbp	100	77.255	Mus_musculus
ENSHGLG00000005955	-	100	77.255	MGP_PahariEiJ_G0016901	Slbp	100	77.255	Mus_pahari
ENSHGLG00000005955	-	100	77.091	MGP_SPRETEiJ_G0028113	Slbp	100	77.091	Mus_spretus
ENSHGLG00000005955	-	76	92.308	ENSMPUG00000011139	SLBP	93	92.308	Mustela_putorius_furo
ENSHGLG00000005955	-	82	85.354	ENSMLUG00000004425	SLBP	85	85.354	Myotis_lucifugus
ENSHGLG00000005955	-	100	75.829	ENSNGAG00000020799	Slbp	100	75.273	Nannospalax_galili
ENSHGLG00000005955	-	100	85.417	ENSNLEG00000000048	SLBP	100	85.417	Nomascus_leucogenys
ENSHGLG00000005955	-	71	81.429	ENSMEUG00000002501	SLBP	89	84.177	Notamacropus_eugenii
ENSHGLG00000005955	-	100	79.412	ENSODEG00000012641	SLBP	100	78.388	Octodon_degus
ENSHGLG00000005955	-	82	83.249	ENSOANG00000014243	SLBP	86	83.249	Ornithorhynchus_anatinus
ENSHGLG00000005955	-	89	53.804	ENSOMEG00000010818	slbp	52	59.574	Oryzias_melastigma
ENSHGLG00000005955	-	100	75.355	ENSOGAG00000009750	SLBP	100	74.545	Otolemur_garnettii
ENSHGLG00000005955	-	82	86.802	ENSOARG00000016090	SLBP	91	86.802	Ovis_aries
ENSHGLG00000005955	-	100	86.307	ENSPPAG00000033300	SLBP	100	86.307	Pan_paniscus
ENSHGLG00000005955	-	82	88.832	ENSPPRG00000016897	SLBP	79	88.832	Panthera_pardus
ENSHGLG00000005955	-	76	93.407	ENSPTIG00000015057	SLBP	95	93.407	Panthera_tigris_altaica
ENSHGLG00000005955	-	100	85.892	ENSPTRG00000015832	SLBP	100	85.892	Pan_troglodytes
ENSHGLG00000005955	-	100	83.058	ENSPANG00000004932	SLBP	100	83.058	Papio_anubis
ENSHGLG00000005955	-	99	50.725	ENSPKIG00000006183	slbp	63	53.261	Paramormyrops_kingsleyae
ENSHGLG00000005955	-	87	52.850	ENSPMGG00000017684	-	53	82.051	Periophthalmus_magnuspinnatus
ENSHGLG00000005955	-	100	76.000	ENSPEMG00000018369	Slbp	100	76.000	Peromyscus_maniculatus_bairdii
ENSHGLG00000005955	-	100	65.424	ENSPCIG00000013575	SLBP	86	65.424	Phascolarctos_cinereus
ENSHGLG00000005955	-	100	75.829	ENSPPYG00000014529	SLBP	100	74.545	Pongo_abelii
ENSHGLG00000005955	-	100	85.833	ENSPCOG00000017399	SLBP	100	85.833	Propithecus_coquereli
ENSHGLG00000005955	-	100	75.479	ENSPVAG00000002807	SLBP	100	75.479	Pteropus_vampyrus
ENSHGLG00000005955	-	91	56.771	ENSPNAG00000018503	slbp	53	65.248	Pygocentrus_nattereri
ENSHGLG00000005955	-	100	76.364	ENSRNOG00000037162	Slbp	100	76.364	Rattus_norvegicus
ENSHGLG00000005955	-	100	83.058	ENSRBIG00000039159	SLBP	100	83.058	Rhinopithecus_bieti
ENSHGLG00000005955	-	92	88.182	ENSRROG00000030081	SLBP	100	88.182	Rhinopithecus_roxellana
ENSHGLG00000005955	-	76	88.462	ENSSBOG00000033897	SLBP	95	88.462	Saimiri_boliviensis_boliviensis
ENSHGLG00000005955	-	100	65.436	ENSSHAG00000013939	SLBP	100	65.436	Sarcophilus_harrisii
ENSHGLG00000005955	-	95	55.721	ENSSFOG00015019429	slbp	50	63.768	Scleropages_formosus
ENSHGLG00000005955	-	92	64.398	ENSSPUG00000016007	SLBP	74	69.036	Sphenodon_punctatus
ENSHGLG00000005955	-	89	53.299	ENSSPAG00000004021	slbp	54	62.676	Stegastes_partitus
ENSHGLG00000005955	-	100	74.545	ENSSSCG00000008676	SLBP	100	74.545	Sus_scrofa
ENSHGLG00000005955	-	94	61.026	ENSTGUG00000010626	-	76	73.737	Taeniopygia_guttata
ENSHGLG00000005955	-	91	55.731	ENSTBEG00000004085	SLBP	78	61.929	Tupaia_belangeri
ENSHGLG00000005955	-	71	79.286	ENSTTRG00000004010	-	89	82.278	Tursiops_truncatus
ENSHGLG00000005955	-	82	87.817	ENSTTRG00000010901	-	91	87.817	Tursiops_truncatus
ENSHGLG00000005955	-	100	85.537	ENSUAMG00000012990	SLBP	100	85.124	Ursus_americanus
ENSHGLG00000005955	-	76	91.758	ENSUMAG00000006119	SLBP	95	91.758	Ursus_maritimus
ENSHGLG00000005955	-	100	75.636	ENSVVUG00000015578	-	100	75.636	Vulpes_vulpes
ENSHGLG00000005955	-	93	53.061	ENSXETG00000003876	slbp	76	57.653	Xenopus_tropicalis