EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000005995 (Gene tree)
Gene ID: -
Gene Symbol: RAB5B
Alias: -
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 6794 bases
Position: chrJH602115.1:12059503-12066296
Accession: 101724150
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000008287	MMR_HSR1	PF01926.23	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000008376	-	1302	XM_013078315	ENSHGLP00000008287	215 (aa)	XP_012933769	G5BB94

Gene Model

Click here to download ENSHGLG00000005995's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000005995's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000005995	RAB5B	78	35.882	ENSHGLG00000000990	RAB39B	80	35.882
ENSHGLG00000005995	RAB5B	78	31.765	ENSHGLG00000018663	RERG	84	31.765
ENSHGLG00000005995	RAB5B	90	35.323	ENSHGLG00000000448	RAB9B	97	35.323
ENSHGLG00000005995	RAB5B	74	37.500	ENSHGLG00000013030	-	67	37.500
ENSHGLG00000005995	RAB5B	93	35.294	ENSHGLG00000001069	RAB9A	99	35.294
ENSHGLG00000005995	RAB5B	78	35.928	ENSHGLG00000005750	-	73	35.928
ENSHGLG00000005995	RAB5B	74	43.293	ENSHGLG00000000127	RAB7A	81	43.293
ENSHGLG00000005995	RAB5B	99	77.103	ENSHGLG00000017749	-	97	77.103
ENSHGLG00000005995	RAB5B	91	41.176	ENSHGLG00000005396	RAB11A	94	41.176
ENSHGLG00000005995	RAB5B	55	31.967	ENSHGLG00000004366	ARL8A	62	31.967
ENSHGLG00000005995	RAB5B	73	34.810	ENSHGLG00000009371	-	66	35.625
ENSHGLG00000005995	RAB5B	56	31.452	ENSHGLG00000001846	ARL8B	63	31.452
ENSHGLG00000005995	RAB5B	86	41.848	ENSHGLG00000004071	RAB2B	85	41.848
ENSHGLG00000005995	RAB5B	80	33.146	ENSHGLG00000004508	HRAS	93	33.146
ENSHGLG00000005995	RAB5B	90	43.878	ENSHGLG00000013585	RAB1A	95	43.878
ENSHGLG00000005995	RAB5B	83	40.556	ENSHGLG00000007301	-	88	40.556
ENSHGLG00000005995	RAB5B	73	35.000	ENSHGLG00000009476	RAB36	60	35.000
ENSHGLG00000005995	RAB5B	86	39.130	ENSHGLG00000019399	RAB2A	97	36.893
ENSHGLG00000005995	RAB5B	80	37.209	ENSHGLG00000012256	RAB15	81	37.209
ENSHGLG00000005995	RAB5B	75	33.129	ENSHGLG00000009388	-	85	33.129
ENSHGLG00000005995	RAB5B	96	83.010	ENSHGLG00000006357	-	99	83.010
ENSHGLG00000005995	RAB5B	90	37.436	ENSHGLG00000012703	RAB35	96	37.436
ENSHGLG00000005995	RAB5B	75	38.554	ENSHGLG00000018536	RAB33A	70	38.554
ENSHGLG00000005995	RAB5B	55	30.159	ENSHGLG00000006478	ARL4A	60	30.159
ENSHGLG00000005995	RAB5B	90	47.938	ENSHGLG00000009337	RAB22A	98	47.938
ENSHGLG00000005995	RAB5B	75	44.720	ENSHGLG00000013486	RAB14	75	44.720
ENSHGLG00000005995	RAB5B	79	30.636	ENSHGLG00000007292	-	75	30.636
ENSHGLG00000005995	RAB5B	91	40.097	ENSHGLG00000005517	RAB25	94	40.097
ENSHGLG00000005995	RAB5B	91	41.827	ENSHGLG00000014984	RAB11B	94	41.827
ENSHGLG00000005995	RAB5B	89	32.642	ENSHGLG00000006790	RHEB	95	32.642
ENSHGLG00000005995	RAB5B	94	40.385	ENSHGLG00000004384	RAB37	93	40.385
ENSHGLG00000005995	RAB5B	77	45.181	ENSHGLG00000008829	-	80	45.181
ENSHGLG00000005995	RAB5B	90	37.129	ENSHGLG00000006346	-	98	37.129
ENSHGLG00000005995	RAB5B	79	35.673	ENSHGLG00000006189	RAB12	71	37.705
ENSHGLG00000005995	RAB5B	79	40.351	ENSHGLG00000008749	RAB13	85	40.351
ENSHGLG00000005995	RAB5B	90	41.000	ENSHGLG00000008311	RAB24	96	42.000
ENSHGLG00000005995	RAB5B	78	42.857	ENSHGLG00000002759	RAB30	83	42.857
ENSHGLG00000005995	RAB5B	77	45.783	ENSHGLG00000016898	RAB6B	80	45.783
ENSHGLG00000005995	RAB5B	76	47.239	ENSHGLG00000009071	RAB1B	82	47.239
ENSHGLG00000005995	RAB5B	79	43.503	ENSHGLG00000004365	RAB18	85	43.503
ENSHGLG00000005995	RAB5B	82	38.462	ENSHGLG00000008370	RAB33B	79	38.462
ENSHGLG00000005995	RAB5B	97	85.167	ENSHGLG00000012067	RAB5C	97	85.167
ENSHGLG00000005995	RAB5B	80	49.123	ENSHGLG00000007261	RAB31	87	49.123
ENSHGLG00000005995	RAB5B	76	33.333	ENSHGLG00000008775	KRAS	90	32.164

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000005995	RAB5B	100	99.070	ENSG00000111540	RAB5B	100	100.000	Homo_sapiens
ENSHGLG00000005995	RAB5B	100	97.696	ENSAMEG00000003196	RAB5B	100	97.696	Ailuropoda_melanoleuca
ENSHGLG00000005995	RAB5B	100	95.349	ENSACAG00000005380	RAB5B	100	95.349	Anolis_carolinensis
ENSHGLG00000005995	RAB5B	100	99.070	ENSANAG00000033215	RAB5B	95	99.070	Aotus_nancymaae
ENSHGLG00000005995	RAB5B	100	98.605	ENSBTAG00000014129	RAB5B	100	98.605	Bos_taurus
ENSHGLG00000005995	RAB5B	100	99.070	ENSCJAG00000041780	RAB5B	95	99.070	Callithrix_jacchus
ENSHGLG00000005995	RAB5B	100	99.070	ENSCAFG00000000087	RAB5B	100	99.070	Canis_familiaris
ENSHGLG00000005995	RAB5B	100	99.070	ENSCAFG00020026094	RAB5B	100	99.070	Canis_lupus_dingo
ENSHGLG00000005995	RAB5B	97	99.038	ENSCHIG00000010333	RAB5B	96	99.038	Capra_hircus
ENSHGLG00000005995	RAB5B	100	98.605	ENSTSYG00000009576	RAB5B	100	98.605	Carlito_syrichta
ENSHGLG00000005995	RAB5B	100	99.070	ENSCPOG00000034818	RAB5B	100	99.070	Cavia_porcellus
ENSHGLG00000005995	RAB5B	100	98.140	ENSCCAG00000019480	RAB5B	100	98.140	Cebus_capucinus
ENSHGLG00000005995	RAB5B	83	98.883	ENSCATG00000034978	RAB5B	98	98.883	Cercocebus_atys
ENSHGLG00000005995	RAB5B	100	98.605	ENSCSAG00000005277	RAB5B	100	98.605	Chlorocebus_sabaeus
ENSHGLG00000005995	RAB5B	100	96.279	ENSCPBG00000012712	RAB5B	100	96.279	Chrysemys_picta_bellii
ENSHGLG00000005995	RAB5B	100	98.605	ENSCGRG00001000428	Rab5b	100	98.605	Cricetulus_griseus_chok1gshd
ENSHGLG00000005995	RAB5B	100	98.605	ENSCGRG00000009508	-	100	98.605	Cricetulus_griseus_crigri
ENSHGLG00000005995	RAB5B	100	99.070	ENSDORG00000025063	Rab5b	100	99.070	Dipodomys_ordii
ENSHGLG00000005995	RAB5B	100	98.605	ENSECAG00000023306	RAB5B	100	98.605	Equus_caballus
ENSHGLG00000005995	RAB5B	100	98.140	ENSEEUG00000006745	RAB5B	100	98.140	Erinaceus_europaeus
ENSHGLG00000005995	RAB5B	100	99.070	ENSFDAG00000008326	RAB5B	100	99.070	Fukomys_damarensis
ENSHGLG00000005995	RAB5B	100	100.000	ENSHGLG00100012955	RAB5B	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000005995	RAB5B	100	98.140	ENSSTOG00000010536	RAB5B	100	98.140	Ictidomys_tridecemlineatus
ENSHGLG00000005995	RAB5B	100	98.605	ENSJJAG00000019506	Rab5b	100	98.605	Jaculus_jaculus
ENSHGLG00000005995	RAB5B	100	98.157	ENSLAFG00000018009	RAB5B	95	98.157	Loxodonta_africana
ENSHGLG00000005995	RAB5B	100	98.605	ENSMFAG00000029992	RAB5B	100	98.605	Macaca_fascicularis
ENSHGLG00000005995	RAB5B	100	98.605	ENSMMUG00000031853	RAB5B	100	98.605	Macaca_mulatta
ENSHGLG00000005995	RAB5B	100	98.605	ENSMNEG00000005338	RAB5B	100	98.605	Macaca_nemestrina
ENSHGLG00000005995	RAB5B	100	98.605	ENSMLEG00000034462	RAB5B	100	98.605	Mandrillus_leucophaeus
ENSHGLG00000005995	RAB5B	100	99.070	ENSMAUG00000011613	Rab5b	100	99.070	Mesocricetus_auratus
ENSHGLG00000005995	RAB5B	100	98.605	ENSMICG00000011086	RAB5B	100	98.605	Microcebus_murinus
ENSHGLG00000005995	RAB5B	100	99.070	ENSMUSG00000000711	Rab5b	100	99.070	Mus_musculus
ENSHGLG00000005995	RAB5B	100	99.070	MGP_PahariEiJ_G0031135	Rab5b	100	99.070	Mus_pahari
ENSHGLG00000005995	RAB5B	100	98.605	MGP_SPRETEiJ_G0016774	Rab5b	100	98.605	Mus_spretus
ENSHGLG00000005995	RAB5B	99	97.685	ENSMPUG00000000946	RAB5B	89	97.685	Mustela_putorius_furo
ENSHGLG00000005995	RAB5B	100	99.070	ENSNLEG00000017570	-	100	99.070	Nomascus_leucogenys
ENSHGLG00000005995	RAB5B	100	99.070	ENSOPRG00000007883	RAB5B	100	99.070	Ochotona_princeps
ENSHGLG00000005995	RAB5B	100	98.605	ENSODEG00000003860	RAB5B	100	98.605	Octodon_degus
ENSHGLG00000005995	RAB5B	100	99.070	ENSOCUG00000013895	RAB5B	95	99.070	Oryctolagus_cuniculus
ENSHGLG00000005995	RAB5B	100	99.070	ENSOARG00000010651	RAB5B	95	99.070	Ovis_aries
ENSHGLG00000005995	RAB5B	100	99.070	ENSPPAG00000035431	RAB5B	100	99.070	Pan_paniscus
ENSHGLG00000005995	RAB5B	100	99.070	ENSPTRG00000005071	RAB5B	97	98.565	Pan_troglodytes
ENSHGLG00000005995	RAB5B	99	98.122	ENSPANG00000021075	RAB5B	96	98.122	Papio_anubis
ENSHGLG00000005995	RAB5B	100	99.070	ENSPCOG00000016461	RAB5B	100	99.070	Propithecus_coquereli
ENSHGLG00000005995	RAB5B	100	98.140	ENSRNOG00000006130	Rab5b	100	98.140	Rattus_norvegicus
ENSHGLG00000005995	RAB5B	100	98.605	ENSRBIG00000013165	RAB5B	100	98.605	Rhinopithecus_bieti
ENSHGLG00000005995	RAB5B	100	98.605	ENSRROG00000037973	RAB5B	100	98.605	Rhinopithecus_roxellana
ENSHGLG00000005995	RAB5B	100	82.791	ENSSBOG00000035419	RAB5B	100	82.791	Saimiri_boliviensis_boliviensis
ENSHGLG00000005995	RAB5B	100	98.140	ENSSHAG00000007727	RAB5B	100	98.140	Sarcophilus_harrisii
ENSHGLG00000005995	RAB5B	100	99.070	ENSSARG00000006237	RAB5B	100	99.070	Sorex_araneus
ENSHGLG00000005995	RAB5B	100	95.349	ENSSPUG00000014873	RAB5B	100	95.349	Sphenodon_punctatus
ENSHGLG00000005995	RAB5B	100	99.070	ENSTTRG00000015001	RAB5B	100	99.070	Tursiops_truncatus
ENSHGLG00000005995	RAB5B	100	98.605	ENSUAMG00000014651	RAB5B	100	98.605	Ursus_americanus
ENSHGLG00000005995	RAB5B	100	98.605	ENSUMAG00000016263	RAB5B	100	98.605	Ursus_maritimus
ENSHGLG00000005995	RAB5B	68	99.315	ENSVVUG00000022054	RAB5B	81	99.315	Vulpes_vulpes