EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000006298 (Gene tree)
Gene ID: -
Gene Symbol: ZIC3
Alias: HTX|HTX1|ZNF203
Full Name: Zic family member 3
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 11142 bases
Position: chrJH602121.1:9200952-9212093
Accession: 101697574
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000008753	zf-C2H2	PF00096.26	1.9e-21	1	4
ENSHGLP00000008753	zf-C2H2	PF00096.26	1.9e-21	2	4
ENSHGLP00000008753	zf-C2H2	PF00096.26	1.9e-21	3	4
ENSHGLP00000008753	zf-C2H2	PF00096.26	1.9e-21	4	4
ENSHGLP00000008752	zf-C2H2	PF00096.26	1.2e-20	1	4
ENSHGLP00000008752	zf-C2H2	PF00096.26	1.2e-20	2	4
ENSHGLP00000008752	zf-C2H2	PF00096.26	1.2e-20	3	4
ENSHGLP00000008752	zf-C2H2	PF00096.26	1.2e-20	4	4
ENSHGLP00000008752	zf-met	PF12874.7	0.00043	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000008848	ZIC3-202	6049	XM_004862324	ENSHGLP00000008753	466 (aa)	XP_004862381	UPI00034F4C0C
ENSHGLT00000008847	ZIC3-201	2311	XM_021242539	ENSHGLP00000008752	456 (aa)	XP_021098198	UPI000A33B1F7

Gene Model

Click here to download ENSHGLG00000006298's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000006298's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000006298	ZIC3	56	39.823	ENSHGLG00000013098	BCL6B	51	42.718

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000006298	ZIC3	100	97.430	ENSG00000156925	ZIC3	100	97.430	Homo_sapiens
ENSHGLG00000006298	ZIC3	100	97.645	ENSANAG00000019614	ZIC3	100	97.645	Aotus_nancymaae
ENSHGLG00000006298	ZIC3	100	97.216	ENSCJAG00000013792	ZIC3	100	97.216	Callithrix_jacchus
ENSHGLG00000006298	ZIC3	100	97.645	ENSCAFG00000018979	ZIC3	100	97.645	Canis_familiaris
ENSHGLG00000006298	ZIC3	100	94.647	ENSTSYG00000003356	ZIC3	100	94.647	Carlito_syrichta
ENSHGLG00000006298	ZIC3	53	98.374	ENSCPOG00000002374	ZIC3	100	98.374	Cavia_porcellus
ENSHGLG00000006298	ZIC3	100	97.430	ENSCCAG00000025983	ZIC3	100	97.430	Cebus_capucinus
ENSHGLG00000006298	ZIC3	100	97.430	ENSCATG00000036569	ZIC3	100	97.430	Cercocebus_atys
ENSHGLG00000006298	ZIC3	100	98.283	ENSCLAG00000001934	ZIC3	100	98.283	Chinchilla_lanigera
ENSHGLG00000006298	ZIC3	93	86.009	ENSCPBG00000026115	ZIC3	100	86.009	Chrysemys_picta_bellii
ENSHGLG00000006298	ZIC3	100	97.645	ENSCANG00000017505	ZIC3	100	97.645	Colobus_angolensis_palliatus
ENSHGLG00000006298	ZIC3	100	98.498	ENSCGRG00001024527	Zic3	100	98.498	Cricetulus_griseus_chok1gshd
ENSHGLG00000006298	ZIC3	100	97.639	ENSDORG00000025481	Zic3	100	97.639	Dipodomys_ordii
ENSHGLG00000006298	ZIC3	100	97.645	ENSFCAG00000025684	ZIC3	100	97.645	Felis_catus
ENSHGLG00000006298	ZIC3	80	99.191	ENSFDAG00000014929	ZIC3	100	100.000	Fukomys_damarensis
ENSHGLG00000006298	ZIC3	96	79.111	ENSGAGG00000004149	ZIC3	92	80.866	Gopherus_agassizii
ENSHGLG00000006298	ZIC3	100	97.430	ENSGGOG00000011914	ZIC3	100	97.430	Gorilla_gorilla
ENSHGLG00000006298	ZIC3	67	71.711	ENSHGLG00100002829	ZIC3	100	78.662	Heterocephalus_glaber_male
ENSHGLG00000006298	ZIC3	100	98.498	ENSJJAG00000022714	Zic3	100	98.498	Jaculus_jaculus
ENSHGLG00000006298	ZIC3	100	76.445	ENSLACG00000014597	ZIC3	100	76.445	Latimeria_chalumnae
ENSHGLG00000006298	ZIC3	88	93.674	ENSLAFG00000007048	ZIC3	99	93.674	Loxodonta_africana
ENSHGLG00000006298	ZIC3	100	97.430	ENSMFAG00000027018	ZIC3	100	97.430	Macaca_fascicularis
ENSHGLG00000006298	ZIC3	100	97.155	ENSMMUG00000002023	ZIC3	100	97.155	Macaca_mulatta
ENSHGLG00000006298	ZIC3	100	97.430	ENSMNEG00000040682	ZIC3	100	97.430	Macaca_nemestrina
ENSHGLG00000006298	ZIC3	100	97.430	ENSMLEG00000004378	ZIC3	100	97.430	Mandrillus_leucophaeus
ENSHGLG00000006298	ZIC3	100	98.283	ENSMAUG00000009402	Zic3	100	98.283	Mesocricetus_auratus
ENSHGLG00000006298	ZIC3	100	97.645	ENSMICG00000042529	ZIC3	100	97.645	Microcebus_murinus
ENSHGLG00000006298	ZIC3	100	97.854	ENSMOCG00000020544	Zic3	100	97.854	Microtus_ochrogaster
ENSHGLG00000006298	ZIC3	100	98.069	MGP_CAROLIEiJ_G0033101	Zic3	100	99.187	Mus_caroli
ENSHGLG00000006298	ZIC3	100	98.069	ENSMUSG00000067860	Zic3	100	99.187	Mus_musculus
ENSHGLG00000006298	ZIC3	100	98.069	MGP_PahariEiJ_G0031644	Zic3	100	99.187	Mus_pahari
ENSHGLG00000006298	ZIC3	100	98.069	MGP_SPRETEiJ_G0034256	Zic3	100	99.187	Mus_spretus
ENSHGLG00000006298	ZIC3	100	97.854	ENSNGAG00000023346	Zic3	100	97.854	Nannospalax_galili
ENSHGLG00000006298	ZIC3	79	97.509	ENSNLEG00000003005	-	100	97.509	Nomascus_leucogenys
ENSHGLG00000006298	ZIC3	100	98.069	ENSODEG00000005556	ZIC3	100	98.069	Octodon_degus
ENSHGLG00000006298	ZIC3	100	97.430	ENSPPAG00000030013	ZIC3	100	97.430	Pan_paniscus
ENSHGLG00000006298	ZIC3	100	97.645	ENSPPRG00000010839	ZIC3	100	97.645	Panthera_pardus
ENSHGLG00000006298	ZIC3	100	97.430	ENSPTRG00000043849	ZIC3	100	97.430	Pan_troglodytes
ENSHGLG00000006298	ZIC3	100	97.430	ENSPANG00000011357	ZIC3	100	97.430	Papio_anubis
ENSHGLG00000006298	ZIC3	100	73.077	ENSPKIG00000017705	zic3	100	73.077	Paramormyrops_kingsleyae
ENSHGLG00000006298	ZIC3	62	90.411	ENSPSIG00000011896	ZIC3	99	90.411	Pelodiscus_sinensis
ENSHGLG00000006298	ZIC3	100	98.283	ENSPEMG00000022168	Zic3	100	98.283	Peromyscus_maniculatus_bairdii
ENSHGLG00000006298	ZIC3	100	97.216	ENSPCOG00000021557	ZIC3	100	97.216	Propithecus_coquereli
ENSHGLG00000006298	ZIC3	100	97.639	ENSRNOG00000000861	Zic3	100	97.639	Rattus_norvegicus
ENSHGLG00000006298	ZIC3	100	97.645	ENSRBIG00000030660	ZIC3	100	97.645	Rhinopithecus_bieti
ENSHGLG00000006298	ZIC3	100	97.645	ENSRROG00000028410	ZIC3	100	97.645	Rhinopithecus_roxellana
ENSHGLG00000006298	ZIC3	100	97.859	ENSSBOG00000024684	ZIC3	100	97.859	Saimiri_boliviensis_boliviensis
ENSHGLG00000006298	ZIC3	99	68.455	ENSSFOG00015008079	zic3	100	68.455	Scleropages_formosus
ENSHGLG00000006298	ZIC3	99	75.107	ENSSFOG00015011731	zic3	100	75.107	Scleropages_formosus
ENSHGLG00000006298	ZIC3	83	83.249	ENSTGUG00000002155	ZIC3	100	83.249	Taeniopygia_guttata
ENSHGLG00000006298	ZIC3	100	97.645	ENSVVUG00000021378	ZIC3	100	97.645	Vulpes_vulpes
ENSHGLG00000006298	ZIC3	100	76.546	ENSXETG00000024458	zic3	100	76.546	Xenopus_tropicalis