EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000006319 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 28110 bases
Position: chrJH602074.1:346851-374960
Accession: 101701368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000008780	YTH	PF04146.15	9.7e-40	1	1
ENSHGLP00000008779	YTH	PF04146.15	1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000008874	-	3272	XM_004849648	ENSHGLP00000008779	731 (aa)	XP_004849705	UPI00034F34BC
ENSHGLT00000008875	-	3194	XM_004849650	ENSHGLP00000008780	705 (aa)	XP_004849707	UPI00034FF326

Gene Model

Click here to download ENSHGLG00000006319's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000006319's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000006319	-	94	72.714	ENSHGLG00000003239	-	86	74.405

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000006319	-	100	97.551	ENSG00000083896	YTHDC1	100	97.551	Homo_sapiens
ENSHGLG00000006319	-	58	59.102	ENSAPOG00000013997	ythdc1	57	62.500	Acanthochromis_polyacanthus
ENSHGLG00000006319	-	100	95.399	ENSAMEG00000005688	YTHDC1	100	95.399	Ailuropoda_melanoleuca
ENSHGLG00000006319	-	71	57.647	ENSACIG00000019728	ythdc1	80	59.649	Amphilophus_citrinellus
ENSHGLG00000006319	-	58	60.360	ENSAOCG00000000239	ythdc1	59	67.464	Amphiprion_ocellaris
ENSHGLG00000006319	-	50	64.420	ENSAPEG00000000618	ythdc1	53	69.231	Amphiprion_percula
ENSHGLG00000006319	-	91	84.281	ENSAPLG00000009921	YTHDC1	92	85.928	Anas_platyrhynchos
ENSHGLG00000006319	-	93	83.628	ENSACAG00000009697	YTHDC1	93	83.776	Anolis_carolinensis
ENSHGLG00000006319	-	100	97.183	ENSANAG00000001522	YTHDC1	100	97.183	Aotus_nancymaae
ENSHGLG00000006319	-	58	59.234	ENSACLG00000019371	ythdc1	59	66.029	Astatotilapia_calliptera
ENSHGLG00000006319	-	92	65.179	ENSAMXG00000006978	ythdc1	92	65.770	Astyanax_mexicanus
ENSHGLG00000006319	-	100	93.553	ENSBTAG00000015572	YTHDC1	100	93.553	Bos_taurus
ENSHGLG00000006319	-	100	97.465	ENSCJAG00000009934	YTHDC1	100	97.465	Callithrix_jacchus
ENSHGLG00000006319	-	100	95.129	ENSCAFG00000002821	YTHDC1	100	95.129	Canis_familiaris
ENSHGLG00000006319	-	100	95.129	ENSCAFG00020027112	YTHDC1	100	95.129	Canis_lupus_dingo
ENSHGLG00000006319	-	91	87.634	ENSCHIG00000004810	YTHDC1	95	94.050	Capra_hircus
ENSHGLG00000006319	-	100	97.602	ENSTSYG00000011668	YTHDC1	100	97.602	Carlito_syrichta
ENSHGLG00000006319	-	90	70.892	ENSCAPG00000008722	YTHDC1	90	68.731	Cavia_aperea
ENSHGLG00000006319	-	100	91.396	ENSCPOG00000010929	YTHDC1	100	91.396	Cavia_porcellus
ENSHGLG00000006319	-	100	97.740	ENSCCAG00000035754	YTHDC1	100	97.740	Cebus_capucinus
ENSHGLG00000006319	-	100	97.418	ENSCATG00000036320	YTHDC1	100	97.418	Cercocebus_atys
ENSHGLG00000006319	-	99	98.481	ENSCLAG00000005482	YTHDC1	99	98.481	Chinchilla_lanigera
ENSHGLG00000006319	-	100	96.467	ENSCSAG00000005252	YTHDC1	100	96.467	Chlorocebus_sabaeus
ENSHGLG00000006319	-	92	85.778	ENSCPBG00000021965	YTHDC1	94	86.656	Chrysemys_picta_bellii
ENSHGLG00000006319	-	100	97.465	ENSCANG00000004769	YTHDC1	100	97.465	Colobus_angolensis_palliatus
ENSHGLG00000006319	-	100	96.463	ENSCGRG00001000816	Ythdc1	100	96.463	Cricetulus_griseus_chok1gshd
ENSHGLG00000006319	-	99	96.286	ENSCGRG00000009807	Ythdc1	99	96.286	Cricetulus_griseus_crigri
ENSHGLG00000006319	-	58	59.649	ENSCSEG00000020404	ythdc1	59	66.427	Cynoglossus_semilaevis
ENSHGLG00000006319	-	56	60.952	ENSCVAG00000022349	ythdc1	59	65.301	Cyprinodon_variegatus
ENSHGLG00000006319	-	92	64.608	ENSDARG00000051953	ythdc1	92	64.565	Danio_rerio
ENSHGLG00000006319	-	100	95.368	ENSDNOG00000004949	YTHDC1	100	95.368	Dasypus_novemcinctus
ENSHGLG00000006319	-	99	97.387	ENSDORG00000013045	Ythdc1	100	97.290	Dipodomys_ordii
ENSHGLG00000006319	-	79	100.000	ENSETEG00000001878	YTHDC1	78	100.000	Echinops_telfairi
ENSHGLG00000006319	-	100	95.535	ENSEASG00005018383	YTHDC1	100	95.535	Equus_asinus_asinus
ENSHGLG00000006319	-	100	95.129	ENSECAG00000018303	YTHDC1	100	95.770	Equus_caballus
ENSHGLG00000006319	-	93	91.789	ENSEEUG00000015466	YTHDC1	93	91.935	Erinaceus_europaeus
ENSHGLG00000006319	-	92	63.104	ENSELUG00000014029	ythdc1	95	63.927	Esox_lucius
ENSHGLG00000006319	-	100	96.348	ENSFCAG00000026791	YTHDC1	100	96.348	Felis_catus
ENSHGLG00000006319	-	69	87.613	ENSFALG00000006581	YTHDC1	87	91.647	Ficedula_albicollis
ENSHGLG00000006319	-	99	99.426	ENSFDAG00000018560	YTHDC1	100	99.426	Fukomys_damarensis
ENSHGLG00000006319	-	66	58.730	ENSFHEG00000001286	ythdc1	60	55.000	Fundulus_heteroclitus
ENSHGLG00000006319	-	60	66.946	ENSGMOG00000018815	ythdc1	71	76.847	Gadus_morhua
ENSHGLG00000006319	-	92	85.802	ENSGALG00000035906	YTHDC1	88	83.493	Gallus_gallus
ENSHGLG00000006319	-	58	62.326	ENSGACG00000015486	ythdc1	57	62.439	Gasterosteus_aculeatus
ENSHGLG00000006319	-	93	86.726	ENSGAGG00000007108	YTHDC1	93	86.726	Gopherus_agassizii
ENSHGLG00000006319	-	100	97.418	ENSGGOG00000021958	YTHDC1	100	97.418	Gorilla_gorilla
ENSHGLG00000006319	-	58	58.559	ENSHBUG00000019288	ythdc1	93	56.305	Haplochromis_burtoni
ENSHGLG00000006319	-	100	99.013	ENSHGLG00100001556	-	100	99.169	Heterocephalus_glaber_male
ENSHGLG00000006319	-	94	71.098	ENSHGLG00100008060	-	86	72.889	Heterocephalus_glaber_male
ENSHGLG00000006319	-	54	70.213	ENSHCOG00000001520	ythdc1	84	70.213	Hippocampus_comes
ENSHGLG00000006319	-	93	67.583	ENSIPUG00000018136	ythdc1	92	67.677	Ictalurus_punctatus
ENSHGLG00000006319	-	100	97.283	ENSSTOG00000013652	YTHDC1	100	97.283	Ictidomys_tridecemlineatus
ENSHGLG00000006319	-	91	93.114	ENSJJAG00000010268	Ythdc1	93	93.563	Jaculus_jaculus
ENSHGLG00000006319	-	58	59.417	ENSKMAG00000006483	ythdc1	85	65.238	Kryptolebias_marmoratus
ENSHGLG00000006319	-	65	63.462	ENSLBEG00000020831	ythdc1	72	75.000	Labrus_bergylta
ENSHGLG00000006319	-	87	73.479	ENSLACG00000004893	YTHDC1	92	73.717	Latimeria_chalumnae
ENSHGLG00000006319	-	93	72.500	ENSLOCG00000003045	ythdc1	87	73.021	Lepisosteus_oculatus
ENSHGLG00000006319	-	100	96.990	ENSLAFG00000021592	YTHDC1	100	96.990	Loxodonta_africana
ENSHGLG00000006319	-	100	97.554	ENSMFAG00000031927	YTHDC1	100	97.554	Macaca_fascicularis
ENSHGLG00000006319	-	100	96.467	ENSMMUG00000002265	YTHDC1	100	97.390	Macaca_mulatta
ENSHGLG00000006319	-	100	97.465	ENSMNEG00000033751	YTHDC1	100	97.465	Macaca_nemestrina
ENSHGLG00000006319	-	100	97.324	ENSMLEG00000042147	YTHDC1	100	97.324	Mandrillus_leucophaeus
ENSHGLG00000006319	-	56	61.871	ENSMAMG00000013122	ythdc1	58	66.587	Mastacembelus_armatus
ENSHGLG00000006319	-	58	58.559	ENSMZEG00005023173	ythdc1	59	66.029	Maylandia_zebra
ENSHGLG00000006319	-	93	84.071	ENSMGAG00000010391	YTHDC1	92	85.398	Meleagris_gallopavo
ENSHGLG00000006319	-	100	92.517	ENSMAUG00000001286	Ythdc1	100	92.517	Mesocricetus_auratus
ENSHGLG00000006319	-	100	97.271	ENSMICG00000034640	YTHDC1	100	97.271	Microcebus_murinus
ENSHGLG00000006319	-	100	96.726	ENSMOCG00000020201	Ythdc1	100	96.726	Microtus_ochrogaster
ENSHGLG00000006319	-	65	56.904	ENSMODG00000009173	-	88	60.427	Monodelphis_domestica
ENSHGLG00000006319	-	96	50.491	ENSMODG00000010076	-	60	60.377	Monodelphis_domestica
ENSHGLG00000006319	-	93	89.069	ENSMODG00000020754	-	92	87.740	Monodelphis_domestica
ENSHGLG00000006319	-	87	68.981	ENSMODG00000014337	-	95	69.307	Monodelphis_domestica
ENSHGLG00000006319	-	51	65.963	ENSMALG00000013412	ythdc1	56	69.341	Monopterus_albus
ENSHGLG00000006319	-	100	95.929	MGP_CAROLIEiJ_G0027347	Ythdc1	100	95.929	Mus_caroli
ENSHGLG00000006319	-	100	95.794	ENSMUSG00000035851	Ythdc1	100	95.794	Mus_musculus
ENSHGLG00000006319	-	93	95.608	MGP_PahariEiJ_G0017126	Ythdc1	97	90.377	Mus_pahari
ENSHGLG00000006319	-	100	96.065	MGP_SPRETEiJ_G0028339	Ythdc1	100	96.065	Mus_spretus
ENSHGLG00000006319	-	93	72.701	ENSMPUG00000001743	YTHDC1	53	96.164	Mustela_putorius_furo
ENSHGLG00000006319	-	99	95.712	ENSMLUG00000016300	YTHDC1	100	95.712	Myotis_lucifugus
ENSHGLG00000006319	-	59	92.162	ENSNGAG00000024000	Ythdc1	93	93.587	Nannospalax_galili
ENSHGLG00000006319	-	60	62.997	ENSNBRG00000007663	ythdc1	70	65.777	Neolamprologus_brichardi
ENSHGLG00000006319	-	99	96.561	ENSNLEG00000009202	YTHDC1	99	96.561	Nomascus_leucogenys
ENSHGLG00000006319	-	82	81.271	ENSMEUG00000007128	YTHDC1	81	81.271	Notamacropus_eugenii
ENSHGLG00000006319	-	76	98.300	ENSOPRG00000008986	YTHDC1	74	98.300	Ochotona_princeps
ENSHGLG00000006319	-	100	98.584	ENSODEG00000001715	YTHDC1	100	98.584	Octodon_degus
ENSHGLG00000006319	-	92	49.855	ENSONIG00000012651	ythdc1	94	56.598	Oreochromis_niloticus
ENSHGLG00000006319	-	88	76.758	ENSOANG00000014398	YTHDC1	55	96.962	Ornithorhynchus_anatinus
ENSHGLG00000006319	-	93	80.792	ENSOCUG00000015886	YTHDC1	57	93.350	Oryctolagus_cuniculus
ENSHGLG00000006319	-	92	53.185	ENSORLG00000030544	ythdc1	60	66.747	Oryzias_latipes
ENSHGLG00000006319	-	92	52.239	ENSORLG00020019316	ythdc1	60	66.747	Oryzias_latipes_hni
ENSHGLG00000006319	-	56	61.520	ENSOMEG00000000551	ythdc1	94	55.755	Oryzias_melastigma
ENSHGLG00000006319	-	100	95.374	ENSOGAG00000003362	YTHDC1	100	95.374	Otolemur_garnettii
ENSHGLG00000006319	-	100	93.553	ENSOARG00000008633	YTHDC1	100	93.553	Ovis_aries
ENSHGLG00000006319	-	100	97.551	ENSPPAG00000041315	YTHDC1	100	97.551	Pan_paniscus
ENSHGLG00000006319	-	100	96.477	ENSPPRG00000011979	YTHDC1	100	96.477	Panthera_pardus
ENSHGLG00000006319	-	99	96.154	ENSPTIG00000015527	YTHDC1	100	96.154	Panthera_tigris_altaica
ENSHGLG00000006319	-	100	97.551	ENSPTRG00000016105	YTHDC1	100	97.551	Pan_troglodytes
ENSHGLG00000006319	-	100	97.418	ENSPANG00000021590	YTHDC1	100	97.418	Papio_anubis
ENSHGLG00000006319	-	93	68.551	ENSPKIG00000018497	ythdc1	93	68.353	Paramormyrops_kingsleyae
ENSHGLG00000006319	-	91	85.949	ENSPSIG00000002782	YTHDC1	92	85.949	Pelodiscus_sinensis
ENSHGLG00000006319	-	55	56.667	ENSPMGG00000000970	-	72	64.808	Periophthalmus_magnuspinnatus
ENSHGLG00000006319	-	99	96.567	ENSPEMG00000013850	Ythdc1	100	96.567	Peromyscus_maniculatus_bairdii
ENSHGLG00000006319	-	93	88.922	ENSPCIG00000006870	YTHDC1	92	88.326	Phascolarctos_cinereus
ENSHGLG00000006319	-	58	58.259	ENSPFOG00000013404	ythdc1	60	65.144	Poecilia_formosa
ENSHGLG00000006319	-	58	58.259	ENSPLAG00000011079	ythdc1	85	65.144	Poecilia_latipinna
ENSHGLG00000006319	-	58	58.259	ENSPMEG00000009238	ythdc1	60	65.144	Poecilia_mexicana
ENSHGLG00000006319	-	71	57.783	ENSPREG00000016973	ythdc1	56	60.202	Poecilia_reticulata
ENSHGLG00000006319	-	87	96.562	ENSPPYG00000014726	YTHDC1	100	96.562	Pongo_abelii
ENSHGLG00000006319	-	77	93.195	ENSPCAG00000009607	YTHDC1	77	88.462	Procavia_capensis
ENSHGLG00000006319	-	100	92.769	ENSPCOG00000019105	YTHDC1	100	92.769	Propithecus_coquereli
ENSHGLG00000006319	-	93	90.365	ENSPVAG00000015551	YTHDC1	93	90.803	Pteropus_vampyrus
ENSHGLG00000006319	-	58	59.234	ENSPNYG00000011687	ythdc1	59	66.029	Pundamilia_nyererei
ENSHGLG00000006319	-	93	69.120	ENSPNAG00000028365	ythdc1	93	69.209	Pygocentrus_nattereri
ENSHGLG00000006319	-	93	94.161	ENSRNOG00000001996	Ythdc1	93	94.745	Rattus_norvegicus
ENSHGLG00000006319	-	99	92.710	ENSRBIG00000028279	YTHDC1	99	92.710	Rhinopithecus_bieti
ENSHGLG00000006319	-	100	97.465	ENSRROG00000035028	YTHDC1	100	97.465	Rhinopithecus_roxellana
ENSHGLG00000006319	-	100	97.554	ENSSBOG00000022353	YTHDC1	100	97.554	Saimiri_boliviensis_boliviensis
ENSHGLG00000006319	-	93	87.888	ENSSHAG00000002538	YTHDC1	91	87.575	Sarcophilus_harrisii
ENSHGLG00000006319	-	93	68.307	ENSSFOG00015003298	ythdc1	60	83.953	Scleropages_formosus
ENSHGLG00000006319	-	56	59.629	ENSSMAG00000009086	ythdc1	60	65.707	Scophthalmus_maximus
ENSHGLG00000006319	-	56	61.017	ENSSDUG00000022008	ythdc1	94	57.247	Seriola_dumerili
ENSHGLG00000006319	-	56	61.017	ENSSLDG00000007926	ythdc1	94	57.101	Seriola_lalandi_dorsalis
ENSHGLG00000006319	-	79	95.904	ENSSARG00000010960	YTHDC1	100	95.904	Sorex_araneus
ENSHGLG00000006319	-	93	81.791	ENSSPUG00000009357	YTHDC1	94	83.005	Sphenodon_punctatus
ENSHGLG00000006319	-	58	61.261	ENSSPAG00000011449	ythdc1	59	67.464	Stegastes_partitus
ENSHGLG00000006319	-	100	95.412	ENSSSCG00000035505	YTHDC1	100	95.412	Sus_scrofa
ENSHGLG00000006319	-	93	85.398	ENSTGUG00000004452	-	92	85.398	Taeniopygia_guttata
ENSHGLG00000006319	-	64	61.224	ENSTRUG00000010142	ythdc1	69	71.795	Takifugu_rubripes
ENSHGLG00000006319	-	89	59.615	ENSTNIG00000013243	ythdc1	89	64.760	Tetraodon_nigroviridis
ENSHGLG00000006319	-	93	86.854	ENSTBEG00000011546	YTHDC1	92	87.445	Tupaia_belangeri
ENSHGLG00000006319	-	93	92.105	ENSTTRG00000005083	YTHDC1	93	92.544	Tursiops_truncatus
ENSHGLG00000006319	-	93	96.218	ENSUAMG00000010388	YTHDC1	100	96.218	Ursus_americanus
ENSHGLG00000006319	-	99	82.692	ENSUMAG00000013668	YTHDC1	98	82.692	Ursus_maritimus
ENSHGLG00000006319	-	100	96.893	ENSVPAG00000009040	YTHDC1	100	96.893	Vicugna_pacos
ENSHGLG00000006319	-	99	96.301	ENSVVUG00000005387	YTHDC1	100	94.913	Vulpes_vulpes
ENSHGLG00000006319	-	92	73.225	ENSXETG00000017960	ythdc1	91	73.373	Xenopus_tropicalis
ENSHGLG00000006319	-	58	58.259	ENSXMAG00000005196	ythdc1	61	64.423	Xiphophorus_maculatus