EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000006334 (Gene tree)
Gene ID: -
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 76649 bases
Position: chrJH602062.1:17138476-17215124
Accession: 101698445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000008808	RNA_pol_Rpb1_5	PF04998.17	3.2e-103	1	1
ENSHGLP00000008809	RNA_pol_Rpb1_5	PF04998.17	3.3e-103	1	1
ENSHGLP00000008809	RNA_pol_Rpb1_4	PF05000.17	1.9e-24	1	1
ENSHGLP00000008808	RNA_pol_Rpb1_4	PF05000.17	1.9e-24	1	1
ENSHGLP00000008809	RNA_pol_Rpb1_2	PF00623.20	5.2e-70	1	1
ENSHGLP00000008808	RNA_pol_Rpb1_2	PF00623.20	5.3e-70	1	1
ENSHGLP00000008809	RNA_pol_Rpb1_3	PF04983.18	5.1e-37	1	1
ENSHGLP00000008808	RNA_pol_Rpb1_3	PF04983.18	5.1e-37	1	1
ENSHGLP00000008809	RNA_pol_Rpb1_1	PF04997.12	2.8e-22	1	1
ENSHGLP00000008808	RNA_pol_Rpb1_1	PF04997.12	3.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000008904	-	5139	XM_004844590	ENSHGLP00000008809	1712 (aa)	XP_004844647	A0A0P6J6F2
ENSHGLT00000008903	-	5145	-	ENSHGLP00000008808	1714 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000006334's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000006334's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000006334	POLR1A	88	31.410	ENSHGLG00000012381	POLR2A	53	35.795
ENSHGLG00000006334	POLR1A	60	33.898	ENSHGLG00000017899	POLR3A	68	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000006334	POLR1A	100	88.792	ENSG00000068654	POLR1A	100	88.502	Homo_sapiens
ENSHGLG00000006334	POLR1A	69	67.647	ENSAPOG00000017945	polr1a	99	67.647	Acanthochromis_polyacanthus
ENSHGLG00000006334	POLR1A	100	89.593	ENSAMEG00000005807	POLR1A	100	91.803	Ailuropoda_melanoleuca
ENSHGLG00000006334	POLR1A	100	63.774	ENSACIG00000022147	polr1a	100	63.188	Amphilophus_citrinellus
ENSHGLG00000006334	POLR1A	100	66.144	ENSAOCG00000017336	polr1a	100	68.600	Amphiprion_ocellaris
ENSHGLG00000006334	POLR1A	94	73.611	ENSAPEG00000016105	polr1a	98	73.611	Amphiprion_percula
ENSHGLG00000006334	POLR1A	100	66.744	ENSATEG00000016773	polr1a	100	66.016	Anabas_testudineus
ENSHGLG00000006334	POLR1A	86	71.978	ENSAPLG00000013871	POLR1A	99	72.173	Anas_platyrhynchos
ENSHGLG00000006334	POLR1A	99	68.837	ENSACAG00000012141	POLR1A	99	68.696	Anolis_carolinensis
ENSHGLG00000006334	POLR1A	100	87.798	ENSANAG00000033927	POLR1A	100	88.088	Aotus_nancymaae
ENSHGLG00000006334	POLR1A	100	63.045	ENSACLG00000020541	polr1a	100	62.944	Astatotilapia_calliptera
ENSHGLG00000006334	POLR1A	100	88.482	ENSBTAG00000006481	POLR1A	100	88.482	Bos_taurus
ENSHGLG00000006334	POLR1A	99	38.600	WBGene00012999	rpoa-1	98	38.127	Caenorhabditis_elegans
ENSHGLG00000006334	POLR1A	100	87.108	ENSCJAG00000019547	POLR1A	100	87.282	Callithrix_jacchus
ENSHGLG00000006334	POLR1A	100	89.936	ENSCAFG00000007613	POLR1A	100	89.936	Canis_familiaris
ENSHGLG00000006334	POLR1A	100	89.954	ENSCAFG00020014752	POLR1A	100	89.954	Canis_lupus_dingo
ENSHGLG00000006334	POLR1A	100	87.879	ENSCHIG00000018204	POLR1A	100	87.704	Capra_hircus
ENSHGLG00000006334	POLR1A	100	87.500	ENSTSYG00000002761	POLR1A	100	87.202	Carlito_syrichta
ENSHGLG00000006334	POLR1A	97	88.842	ENSCAPG00000010132	POLR1A	100	88.842	Cavia_aperea
ENSHGLG00000006334	POLR1A	100	93.754	ENSCPOG00000012350	POLR1A	100	93.754	Cavia_porcellus
ENSHGLG00000006334	POLR1A	100	87.689	ENSCCAG00000019839	POLR1A	100	87.863	Cebus_capucinus
ENSHGLG00000006334	POLR1A	100	89.547	ENSCATG00000029786	POLR1A	100	89.257	Cercocebus_atys
ENSHGLG00000006334	POLR1A	100	94.299	ENSCLAG00000005187	POLR1A	100	94.299	Chinchilla_lanigera
ENSHGLG00000006334	POLR1A	100	89.024	ENSCSAG00000016251	POLR1A	100	89.199	Chlorocebus_sabaeus
ENSHGLG00000006334	POLR1A	99	75.000	ENSCPBG00000001115	POLR1A	99	75.000	Chrysemys_picta_bellii
ENSHGLG00000006334	POLR1A	99	47.136	ENSCSAVG00000007184	-	91	55.583	Ciona_savignyi
ENSHGLG00000006334	POLR1A	100	86.361	ENSCANG00000031785	POLR1A	100	86.361	Colobus_angolensis_palliatus
ENSHGLG00000006334	POLR1A	100	85.215	ENSCGRG00001006651	Polr1a	100	85.215	Cricetulus_griseus_chok1gshd
ENSHGLG00000006334	POLR1A	60	89.561	ENSCGRG00000010834	Polr1a	100	89.561	Cricetulus_griseus_crigri
ENSHGLG00000006334	POLR1A	100	62.238	ENSCSEG00000020190	polr1a	100	62.121	Cynoglossus_semilaevis
ENSHGLG00000006334	POLR1A	100	64.563	ENSCVAG00000020941	polr1a	100	64.240	Cyprinodon_variegatus
ENSHGLG00000006334	POLR1A	100	66.744	ENSDARG00000098375	polr1a	100	66.764	Danio_rerio
ENSHGLG00000006334	POLR1A	100	82.596	ENSDNOG00000010829	POLR1A	100	82.596	Dasypus_novemcinctus
ENSHGLG00000006334	POLR1A	100	89.257	ENSDORG00000008298	Polr1a	100	89.141	Dipodomys_ordii
ENSHGLG00000006334	POLR1A	72	96.875	ENSETEG00000000412	-	72	96.875	Echinops_telfairi
ENSHGLG00000006334	POLR1A	89	47.375	ENSEBUG00000005667	-	99	47.894	Eptatretus_burgeri
ENSHGLG00000006334	POLR1A	100	90.250	ENSEASG00005001625	POLR1A	100	90.424	Equus_asinus_asinus
ENSHGLG00000006334	POLR1A	100	90.192	ENSECAG00000010092	POLR1A	100	92.531	Equus_caballus
ENSHGLG00000006334	POLR1A	100	90.192	ENSECAG00000030510	-	100	92.531	Equus_caballus
ENSHGLG00000006334	POLR1A	100	90.192	ENSECAG00000036306	-	100	92.531	Equus_caballus
ENSHGLG00000006334	POLR1A	85	94.681	ENSEEUG00000000676	POLR1A	85	95.556	Erinaceus_europaeus
ENSHGLG00000006334	POLR1A	100	66.108	ENSELUG00000012769	polr1a	99	65.750	Esox_lucius
ENSHGLG00000006334	POLR1A	100	89.419	ENSFCAG00000008966	POLR1A	100	89.419	Felis_catus
ENSHGLG00000006334	POLR1A	99	71.302	ENSFALG00000010082	POLR1A	99	71.302	Ficedula_albicollis
ENSHGLG00000006334	POLR1A	100	94.866	ENSFDAG00000013726	POLR1A	100	94.749	Fukomys_damarensis
ENSHGLG00000006334	POLR1A	100	62.442	ENSFHEG00000005996	polr1a	100	62.595	Fundulus_heteroclitus
ENSHGLG00000006334	POLR1A	100	60.093	ENSGMOG00000002230	polr1a	100	60.140	Gadus_morhua
ENSHGLG00000006334	POLR1A	91	69.128	ENSGALG00000038160	-	99	69.596	Gallus_gallus
ENSHGLG00000006334	POLR1A	100	64.572	ENSGAFG00000015266	polr1a	100	64.323	Gambusia_affinis
ENSHGLG00000006334	POLR1A	100	64.114	ENSGACG00000018791	polr1a	100	63.995	Gasterosteus_aculeatus
ENSHGLG00000006334	POLR1A	89	75.583	ENSGAGG00000004984	-	95	81.599	Gopherus_agassizii
ENSHGLG00000006334	POLR1A	100	88.792	ENSGGOG00000001788	POLR1A	100	88.502	Gorilla_gorilla
ENSHGLG00000006334	POLR1A	90	64.473	ENSHBUG00000020021	polr1a	98	64.673	Haplochromis_burtoni
ENSHGLG00000006334	POLR1A	100	99.709	ENSHGLG00100006614	POLR1A	100	99.709	Heterocephalus_glaber_male
ENSHGLG00000006334	POLR1A	100	62.449	ENSHCOG00000003345	polr1a	100	62.226	Hippocampus_comes
ENSHGLG00000006334	POLR1A	100	65.872	ENSIPUG00000013174	polr1a	100	65.336	Ictalurus_punctatus
ENSHGLG00000006334	POLR1A	100	87.974	ENSSTOG00000012580	POLR1A	100	88.040	Ictidomys_tridecemlineatus
ENSHGLG00000006334	POLR1A	100	90.379	ENSJJAG00000013113	Polr1a	100	90.379	Jaculus_jaculus
ENSHGLG00000006334	POLR1A	100	65.793	ENSKMAG00000007399	polr1a	100	65.268	Kryptolebias_marmoratus
ENSHGLG00000006334	POLR1A	94	69.111	ENSLBEG00000015401	polr1a	99	67.989	Labrus_bergylta
ENSHGLG00000006334	POLR1A	53	76.304	ENSLACG00000003218	polr1a	100	76.304	Latimeria_chalumnae
ENSHGLG00000006334	POLR1A	100	71.080	ENSLOCG00000010881	polr1a	100	71.080	Lepisosteus_oculatus
ENSHGLG00000006334	POLR1A	100	88.044	ENSLAFG00000014948	POLR1A	100	87.870	Loxodonta_africana
ENSHGLG00000006334	POLR1A	100	89.199	ENSMFAG00000046097	POLR1A	100	89.373	Macaca_fascicularis
ENSHGLG00000006334	POLR1A	100	89.082	ENSMMUG00000015815	POLR1A	100	89.257	Macaca_mulatta
ENSHGLG00000006334	POLR1A	100	89.199	ENSMNEG00000043313	POLR1A	100	89.373	Macaca_nemestrina
ENSHGLG00000006334	POLR1A	100	88.328	ENSMLEG00000042428	POLR1A	100	88.502	Mandrillus_leucophaeus
ENSHGLG00000006334	POLR1A	100	66.589	ENSMAMG00000016565	polr1a	100	66.531	Mastacembelus_armatus
ENSHGLG00000006334	POLR1A	100	66.280	ENSMZEG00005004915	polr1a	100	66.299	Maylandia_zebra
ENSHGLG00000006334	POLR1A	99	68.476	ENSMGAG00000013111	POLR1A	99	69.383	Meleagris_gallopavo
ENSHGLG00000006334	POLR1A	92	89.898	ENSMAUG00000008497	Polr1a	100	89.898	Mesocricetus_auratus
ENSHGLG00000006334	POLR1A	100	89.031	ENSMICG00000000757	POLR1A	100	88.915	Microcebus_murinus
ENSHGLG00000006334	POLR1A	100	88.882	ENSMOCG00000000122	Polr1a	100	88.882	Microtus_ochrogaster
ENSHGLG00000006334	POLR1A	100	65.423	ENSMMOG00000010216	polr1a	100	64.750	Mola_mola
ENSHGLG00000006334	POLR1A	100	65.601	ENSMALG00000013363	polr1a	100	65.152	Monopterus_albus
ENSHGLG00000006334	POLR1A	100	87.958	MGP_CAROLIEiJ_G0028494	Polr1a	100	87.609	Mus_caroli
ENSHGLG00000006334	POLR1A	100	87.842	ENSMUSG00000049553	Polr1a	100	87.725	Mus_musculus
ENSHGLG00000006334	POLR1A	100	88.824	MGP_PahariEiJ_G0022230	Polr1a	100	88.417	Mus_pahari
ENSHGLG00000006334	POLR1A	100	86.106	MGP_SPRETEiJ_G0029499	Polr1a	100	86.629	Mus_spretus
ENSHGLG00000006334	POLR1A	100	90.233	ENSMPUG00000009135	POLR1A	100	90.233	Mustela_putorius_furo
ENSHGLG00000006334	POLR1A	100	87.905	ENSMLUG00000015723	POLR1A	100	87.956	Myotis_lucifugus
ENSHGLG00000006334	POLR1A	100	89.471	ENSNGAG00000017907	Polr1a	100	89.412	Nannospalax_galili
ENSHGLG00000006334	POLR1A	100	66.357	ENSNBRG00000000519	polr1a	100	66.357	Neolamprologus_brichardi
ENSHGLG00000006334	POLR1A	100	87.110	ENSNLEG00000002264	POLR1A	100	87.052	Nomascus_leucogenys
ENSHGLG00000006334	POLR1A	75	92.913	ENSMEUG00000011665	-	75	92.913	Notamacropus_eugenii
ENSHGLG00000006334	POLR1A	99	82.862	ENSOPRG00000008269	POLR1A	100	82.783	Ochotona_princeps
ENSHGLG00000006334	POLR1A	100	93.932	ENSODEG00000003542	POLR1A	100	94.399	Octodon_degus
ENSHGLG00000006334	POLR1A	100	66.395	ENSONIG00000015895	polr1a	100	66.338	Oreochromis_niloticus
ENSHGLG00000006334	POLR1A	100	90.093	ENSOCUG00000010138	POLR1A	100	90.268	Oryctolagus_cuniculus
ENSHGLG00000006334	POLR1A	100	65.447	ENSORLG00000008753	polr1a	99	65.139	Oryzias_latipes
ENSHGLG00000006334	POLR1A	100	64.190	ENSORLG00020020726	polr1a	99	63.536	Oryzias_latipes_hni
ENSHGLG00000006334	POLR1A	96	74.468	ENSORLG00015016071	polr1a	99	75.556	Oryzias_latipes_hsok
ENSHGLG00000006334	POLR1A	100	88.966	ENSOGAG00000004031	POLR1A	100	88.805	Otolemur_garnettii
ENSHGLG00000006334	POLR1A	100	88.106	ENSOARG00000020601	POLR1A	100	88.457	Ovis_aries
ENSHGLG00000006334	POLR1A	100	88.560	ENSPPAG00000042450	POLR1A	100	88.269	Pan_paniscus
ENSHGLG00000006334	POLR1A	100	89.477	ENSPPRG00000006702	POLR1A	100	89.477	Panthera_pardus
ENSHGLG00000006334	POLR1A	100	88.992	ENSPTIG00000018783	POLR1A	100	88.992	Panthera_tigris_altaica
ENSHGLG00000006334	POLR1A	100	88.328	ENSPTRG00000012147	POLR1A	100	88.095	Pan_troglodytes
ENSHGLG00000006334	POLR1A	100	89.431	ENSPANG00000025908	POLR1A	100	89.141	Papio_anubis
ENSHGLG00000006334	POLR1A	94	74.306	ENSPKIG00000005468	polr1a	99	74.306	Paramormyrops_kingsleyae
ENSHGLG00000006334	POLR1A	63	69.530	ENSPSIG00000009321	-	99	72.037	Pelodiscus_sinensis
ENSHGLG00000006334	POLR1A	55	68.090	ENSPMGG00000009718	polr1a	95	68.090	Periophthalmus_magnuspinnatus
ENSHGLG00000006334	POLR1A	100	89.820	ENSPEMG00000022224	Polr1a	100	89.645	Peromyscus_maniculatus_bairdii
ENSHGLG00000006334	POLR1A	95	79.645	ENSPCIG00000004222	POLR1A	99	79.245	Phascolarctos_cinereus
ENSHGLG00000006334	POLR1A	100	64.535	ENSPFOG00000005025	polr1a	100	64.709	Poecilia_formosa
ENSHGLG00000006334	POLR1A	100	64.904	ENSPLAG00000021389	polr1a	100	64.730	Poecilia_latipinna
ENSHGLG00000006334	POLR1A	100	62.870	ENSPMEG00000006463	polr1a	100	63.051	Poecilia_mexicana
ENSHGLG00000006334	POLR1A	100	64.614	ENSPREG00000002389	polr1a	100	64.730	Poecilia_reticulata
ENSHGLG00000006334	POLR1A	100	88.560	ENSPPYG00000012217	POLR1A	100	88.269	Pongo_abelii
ENSHGLG00000006334	POLR1A	92	100.000	ENSPCAG00000011582	POLR1A	92	100.000	Procavia_capensis
ENSHGLG00000006334	POLR1A	100	89.031	ENSPCOG00000026987	POLR1A	100	89.089	Propithecus_coquereli
ENSHGLG00000006334	POLR1A	95	88.321	ENSPVAG00000012674	POLR1A	95	87.719	Pteropus_vampyrus
ENSHGLG00000006334	POLR1A	100	66.280	ENSPNYG00000000026	polr1a	100	66.299	Pundamilia_nyererei
ENSHGLG00000006334	POLR1A	100	66.205	ENSPNAG00000019223	polr1a	99	68.854	Pygocentrus_nattereri
ENSHGLG00000006334	POLR1A	100	89.290	ENSRNOG00000009545	Polr1a	100	89.290	Rattus_norvegicus
ENSHGLG00000006334	POLR1A	100	88.444	ENSRBIG00000028335	POLR1A	100	88.618	Rhinopithecus_bieti
ENSHGLG00000006334	POLR1A	100	88.386	ENSRROG00000031473	POLR1A	100	88.560	Rhinopithecus_roxellana
ENSHGLG00000006334	POLR1A	99	36.708	YOR341W	RPA190	99	36.806	Saccharomyces_cerevisiae
ENSHGLG00000006334	POLR1A	100	87.166	ENSSBOG00000030262	POLR1A	100	87.340	Saimiri_boliviensis_boliviensis
ENSHGLG00000006334	POLR1A	100	73.499	ENSSHAG00000014739	POLR1A	100	73.499	Sarcophilus_harrisii
ENSHGLG00000006334	POLR1A	100	68.026	ENSSFOG00015019716	polr1a	100	67.949	Scleropages_formosus
ENSHGLG00000006334	POLR1A	100	65.802	ENSSMAG00000014342	polr1a	100	65.434	Scophthalmus_maximus
ENSHGLG00000006334	POLR1A	100	67.015	ENSSDUG00000014631	polr1a	100	66.532	Seriola_dumerili
ENSHGLG00000006334	POLR1A	100	65.157	ENSSLDG00000024095	polr1a	100	64.682	Seriola_lalandi_dorsalis
ENSHGLG00000006334	POLR1A	75	97.872	ENSSARG00000003136	-	76	97.872	Sorex_araneus
ENSHGLG00000006334	POLR1A	100	70.455	ENSSPUG00000004215	POLR1A	98	76.923	Sphenodon_punctatus
ENSHGLG00000006334	POLR1A	64	71.896	ENSSPAG00000016341	polr1a	94	71.896	Stegastes_partitus
ENSHGLG00000006334	POLR1A	83	90.259	ENSSSCG00000008226	POLR1A	99	90.232	Sus_scrofa
ENSHGLG00000006334	POLR1A	99	70.939	ENSTGUG00000010704	POLR1A	100	70.880	Taeniopygia_guttata
ENSHGLG00000006334	POLR1A	100	64.183	ENSTRUG00000002210	polr1a	99	63.783	Takifugu_rubripes
ENSHGLG00000006334	POLR1A	100	60.335	ENSTNIG00000010116	polr1a	100	60.335	Tetraodon_nigroviridis
ENSHGLG00000006334	POLR1A	74	96.460	ENSTBEG00000008646	POLR1A	74	96.460	Tupaia_belangeri
ENSHGLG00000006334	POLR1A	100	84.767	ENSTTRG00000008597	POLR1A	100	84.826	Tursiops_truncatus
ENSHGLG00000006334	POLR1A	69	89.153	ENSUAMG00000012158	-	94	89.153	Ursus_americanus
ENSHGLG00000006334	POLR1A	100	89.238	ENSUMAG00000006700	POLR1A	100	89.238	Ursus_maritimus
ENSHGLG00000006334	POLR1A	100	89.761	ENSVVUG00000001245	POLR1A	100	89.761	Vulpes_vulpes
ENSHGLG00000006334	POLR1A	100	67.281	ENSXETG00000001952	polr1a	100	68.908	Xenopus_tropicalis
ENSHGLG00000006334	POLR1A	100	64.846	ENSXMAG00000004032	polr1a	100	65.020	Xiphophorus_maculatus