EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000006420 (Gene tree)
Gene ID: -
Gene Symbol: SYNJ1
Alias: INPP5G|PARK20
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 102868 bases
Position: chrJH602058.1:20881317-20984184
Accession: 101718278
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000008930	Exo_endo_phos	PF03372.23	4.3e-15	1	1
ENSHGLP00000008929	Exo_endo_phos	PF03372.23	1.1e-14	1	1
ENSHGLP00000008931	Exo_endo_phos	PF03372.23	1.4e-07	1	1
ENSHGLP00000008930	DUF1866	PF08952.11	9.2e-58	1	1
ENSHGLP00000008929	DUF1866	PF08952.11	1e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000009026	SYNJ1-203	7324	-	ENSHGLP00000008931	693 (aa)	-	-
ENSHGLT00000009024	SYNJ1-201	7259	XM_004842288	ENSHGLP00000008929	1611 (aa)	XP_004842345	UPI000350048E
ENSHGLT00000009025	SYNJ1-202	3936	XM_004842290	ENSHGLP00000008930	1311 (aa)	XP_004842347	-

Gene Model

Click here to download ENSHGLG00000006420's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000006420's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000006420	SYNJ1	100	58.333	ENSHGLG00000007534	SYNJ2	85	53.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000006420	SYNJ1	100	98.413	ENSG00000159082	SYNJ1	99	98.413	Homo_sapiens
ENSHGLG00000006420	SYNJ1	100	83.309	ENSAPOG00000002809	synj1	94	69.329	Acanthochromis_polyacanthus
ENSHGLG00000006420	SYNJ1	100	96.719	ENSAMEG00000015028	SYNJ1	100	90.550	Ailuropoda_melanoleuca
ENSHGLG00000006420	SYNJ1	100	78.993	ENSACIG00000008857	synj1	99	65.738	Amphilophus_citrinellus
ENSHGLG00000006420	SYNJ1	100	82.878	ENSAOCG00000009835	synj1	96	67.590	Amphiprion_ocellaris
ENSHGLG00000006420	SYNJ1	100	82.878	ENSAPEG00000021010	synj1	92	62.056	Amphiprion_percula
ENSHGLG00000006420	SYNJ1	100	82.014	ENSATEG00000002306	synj1	87	61.788	Anabas_testudineus
ENSHGLG00000006420	SYNJ1	100	91.619	ENSAPLG00000011832	SYNJ1	100	78.468	Anas_platyrhynchos
ENSHGLG00000006420	SYNJ1	100	90.442	ENSACAG00000003006	-	100	83.346	Anolis_carolinensis
ENSHGLG00000006420	SYNJ1	100	98.124	ENSANAG00000027325	SYNJ1	100	93.598	Aotus_nancymaae
ENSHGLG00000006420	SYNJ1	100	82.014	ENSACLG00000002255	synj1	100	65.753	Astatotilapia_calliptera
ENSHGLG00000006420	SYNJ1	100	82.615	ENSAMXG00000008208	synj1	95	59.963	Astyanax_mexicanus
ENSHGLG00000006420	SYNJ1	100	97.835	ENSBTAG00000003063	SYNJ1	100	93.177	Bos_taurus
ENSHGLG00000006420	SYNJ1	100	98.413	ENSCJAG00000009187	SYNJ1	100	93.674	Callithrix_jacchus
ENSHGLG00000006420	SYNJ1	100	97.980	ENSCAFG00000009041	SYNJ1	100	90.857	Canis_familiaris
ENSHGLG00000006420	SYNJ1	100	98.413	ENSCAFG00020025776	SYNJ1	100	87.326	Canis_lupus_dingo
ENSHGLG00000006420	SYNJ1	100	97.835	ENSCHIG00000005095	SYNJ1	100	87.691	Capra_hircus
ENSHGLG00000006420	SYNJ1	100	97.835	ENSTSYG00000014541	SYNJ1	100	92.906	Carlito_syrichta
ENSHGLG00000006420	SYNJ1	89	88.357	ENSCAPG00000014483	SYNJ1	99	80.769	Cavia_aperea
ENSHGLG00000006420	SYNJ1	100	98.268	ENSCPOG00000012182	SYNJ1	100	95.423	Cavia_porcellus
ENSHGLG00000006420	SYNJ1	100	98.268	ENSCCAG00000020825	SYNJ1	100	93.445	Cebus_capucinus
ENSHGLG00000006420	SYNJ1	100	98.557	ENSCATG00000033891	SYNJ1	100	93.669	Cercocebus_atys
ENSHGLG00000006420	SYNJ1	100	98.413	ENSCLAG00000009796	SYNJ1	100	98.413	Chinchilla_lanigera
ENSHGLG00000006420	SYNJ1	100	96.862	ENSCSAG00000009654	SYNJ1	100	95.042	Chlorocebus_sabaeus
ENSHGLG00000006420	SYNJ1	83	100.000	ENSCHOG00000012390	SYNJ1	87	91.857	Choloepus_hoffmanni
ENSHGLG00000006420	SYNJ1	100	93.218	ENSCPBG00000006402	SYNJ1	97	87.480	Chrysemys_picta_bellii
ENSHGLG00000006420	SYNJ1	100	98.557	ENSCANG00000031359	SYNJ1	100	93.822	Colobus_angolensis_palliatus
ENSHGLG00000006420	SYNJ1	100	97.114	ENSCGRG00001010861	Synj1	100	93.211	Cricetulus_griseus_chok1gshd
ENSHGLG00000006420	SYNJ1	100	97.114	ENSCGRG00000015749	Synj1	100	97.114	Cricetulus_griseus_crigri
ENSHGLG00000006420	SYNJ1	100	80.797	ENSCSEG00000019614	synj1	99	68.992	Cynoglossus_semilaevis
ENSHGLG00000006420	SYNJ1	100	77.366	ENSCVAG00000019250	synj1	97	68.148	Cyprinodon_variegatus
ENSHGLG00000006420	SYNJ1	100	81.650	ENSDARG00000025011	synj1	100	67.805	Danio_rerio
ENSHGLG00000006420	SYNJ1	100	89.660	ENSDNOG00000010732	SYNJ1	99	85.876	Dasypus_novemcinctus
ENSHGLG00000006420	SYNJ1	100	98.124	ENSDORG00000014735	-	100	98.124	Dipodomys_ordii
ENSHGLG00000006420	SYNJ1	86	96.014	ENSETEG00000018674	SYNJ1	79	96.014	Echinops_telfairi
ENSHGLG00000006420	SYNJ1	100	98.268	ENSEASG00005006287	SYNJ1	98	93.867	Equus_asinus_asinus
ENSHGLG00000006420	SYNJ1	100	98.124	ENSECAG00000004829	SYNJ1	100	91.387	Equus_caballus
ENSHGLG00000006420	SYNJ1	83	100.000	ENSEEUG00000005150	SYNJ1	95	89.118	Erinaceus_europaeus
ENSHGLG00000006420	SYNJ1	100	81.583	ENSELUG00000009731	synj1	96	57.941	Esox_lucius
ENSHGLG00000006420	SYNJ1	100	98.124	ENSFCAG00000012498	SYNJ1	100	93.151	Felis_catus
ENSHGLG00000006420	SYNJ1	74	76.548	ENSFALG00000004680	SYNJ1	100	69.952	Ficedula_albicollis
ENSHGLG00000006420	SYNJ1	100	98.846	ENSFDAG00000016818	SYNJ1	100	98.846	Fukomys_damarensis
ENSHGLG00000006420	SYNJ1	100	81.081	ENSFHEG00000017689	synj1	96	60.127	Fundulus_heteroclitus
ENSHGLG00000006420	SYNJ1	93	78.811	ENSGMOG00000014852	synj1	77	72.031	Gadus_morhua
ENSHGLG00000006420	SYNJ1	100	92.929	ENSGALG00000034317	SYNJ1	100	75.078	Gallus_gallus
ENSHGLG00000006420	SYNJ1	100	82.014	ENSGAFG00000019466	synj1	96	61.778	Gambusia_affinis
ENSHGLG00000006420	SYNJ1	98	76.156	ENSGACG00000020575	synj1	94	62.963	Gasterosteus_aculeatus
ENSHGLG00000006420	SYNJ1	100	93.362	ENSGAGG00000022523	SYNJ1	100	84.887	Gopherus_agassizii
ENSHGLG00000006420	SYNJ1	100	98.413	ENSGGOG00000015945	SYNJ1	100	93.593	Gorilla_gorilla
ENSHGLG00000006420	SYNJ1	100	80.654	ENSHBUG00000007774	synj1	100	65.587	Haplochromis_burtoni
ENSHGLG00000006420	SYNJ1	100	100.000	ENSHGLG00100012591	SYNJ1	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000006420	SYNJ1	100	77.122	ENSHCOG00000012774	synj1	85	72.744	Hippocampus_comes
ENSHGLG00000006420	SYNJ1	100	82.590	ENSIPUG00000010691	SYNJ1	95	62.589	Ictalurus_punctatus
ENSHGLG00000006420	SYNJ1	100	98.557	ENSSTOG00000015806	SYNJ1	100	96.339	Ictidomys_tridecemlineatus
ENSHGLG00000006420	SYNJ1	98	88.768	ENSJJAG00000020168	Synj1	100	85.914	Jaculus_jaculus
ENSHGLG00000006420	SYNJ1	100	82.014	ENSKMAG00000004221	synj1	92	72.011	Kryptolebias_marmoratus
ENSHGLG00000006420	SYNJ1	100	81.097	ENSLBEG00000015081	synj1	96	63.125	Labrus_bergylta
ENSHGLG00000006420	SYNJ1	100	86.261	ENSLACG00000005928	SYNJ1	97	69.534	Latimeria_chalumnae
ENSHGLG00000006420	SYNJ1	100	84.068	ENSLOCG00000009230	synj1	100	69.483	Lepisosteus_oculatus
ENSHGLG00000006420	SYNJ1	100	96.148	ENSLAFG00000011806	SYNJ1	99	88.671	Loxodonta_africana
ENSHGLG00000006420	SYNJ1	94	98.162	ENSMFAG00000018883	SYNJ1	99	94.729	Macaca_fascicularis
ENSHGLG00000006420	SYNJ1	100	97.290	ENSMMUG00000004624	SYNJ1	100	94.749	Macaca_mulatta
ENSHGLG00000006420	SYNJ1	100	98.557	ENSMNEG00000040077	SYNJ1	100	91.111	Macaca_nemestrina
ENSHGLG00000006420	SYNJ1	100	98.557	ENSMLEG00000037029	SYNJ1	100	93.822	Mandrillus_leucophaeus
ENSHGLG00000006420	SYNJ1	100	82.590	ENSMAMG00000013404	synj1	88	61.751	Mastacembelus_armatus
ENSHGLG00000006420	SYNJ1	100	82.014	ENSMZEG00005024358	synj1	100	65.393	Maylandia_zebra
ENSHGLG00000006420	SYNJ1	100	89.533	ENSMGAG00000014522	SYNJ1	100	78.231	Meleagris_gallopavo
ENSHGLG00000006420	SYNJ1	100	96.825	ENSMAUG00000009743	Synj1	100	96.825	Mesocricetus_auratus
ENSHGLG00000006420	SYNJ1	100	98.268	ENSMICG00000034953	SYNJ1	100	93.288	Microcebus_murinus
ENSHGLG00000006420	SYNJ1	100	81.135	ENSMMOG00000010203	synj1	85	75.783	Mola_mola
ENSHGLG00000006420	SYNJ1	100	86.448	ENSMODG00000021073	SYNJ1	100	80.273	Monodelphis_domestica
ENSHGLG00000006420	SYNJ1	100	82.446	ENSMALG00000014015	synj1	92	60.458	Monopterus_albus
ENSHGLG00000006420	SYNJ1	100	97.547	MGP_CAROLIEiJ_G0020951	Synj1	100	97.547	Mus_caroli
ENSHGLG00000006420	SYNJ1	100	97.980	ENSMUSG00000022973	Synj1	100	97.980	Mus_musculus
ENSHGLG00000006420	SYNJ1	100	97.980	MGP_PahariEiJ_G0016656	Synj1	100	97.980	Mus_pahari
ENSHGLG00000006420	SYNJ1	100	97.980	MGP_SPRETEiJ_G0021857	Synj1	100	97.980	Mus_spretus
ENSHGLG00000006420	SYNJ1	100	96.879	ENSMPUG00000001153	SYNJ1	100	90.582	Mustela_putorius_furo
ENSHGLG00000006420	SYNJ1	62	83.721	ENSMLUG00000005764	-	100	75.648	Myotis_lucifugus
ENSHGLG00000006420	SYNJ1	94	94.793	ENSMLUG00000026584	-	100	94.667	Myotis_lucifugus
ENSHGLG00000006420	SYNJ1	100	97.547	ENSNGAG00000000453	Synj1	100	97.547	Nannospalax_galili
ENSHGLG00000006420	SYNJ1	100	82.158	ENSNBRG00000011936	synj1	96	57.835	Neolamprologus_brichardi
ENSHGLG00000006420	SYNJ1	88	90.667	ENSNLEG00000003734	SYNJ1	99	90.613	Nomascus_leucogenys
ENSHGLG00000006420	SYNJ1	89	79.614	ENSMEUG00000004158	-	73	76.530	Notamacropus_eugenii
ENSHGLG00000006420	SYNJ1	100	90.870	ENSOPRG00000013602	SYNJ1	93	93.293	Ochotona_princeps
ENSHGLG00000006420	SYNJ1	100	97.980	ENSODEG00000002409	-	100	97.980	Octodon_degus
ENSHGLG00000006420	SYNJ1	100	81.081	ENSONIG00000004667	synj1	100	67.015	Oreochromis_niloticus
ENSHGLG00000006420	SYNJ1	94	92.113	ENSOANG00000006929	SYNJ1	100	76.711	Ornithorhynchus_anatinus
ENSHGLG00000006420	SYNJ1	100	96.148	ENSOCUG00000001420	SYNJ1	100	87.619	Oryctolagus_cuniculus
ENSHGLG00000006420	SYNJ1	100	81.007	ENSORLG00000004320	synj1	92	67.981	Oryzias_latipes
ENSHGLG00000006420	SYNJ1	100	77.525	ENSORLG00020011994	synj1	96	67.429	Oryzias_latipes_hni
ENSHGLG00000006420	SYNJ1	100	81.151	ENSORLG00015018077	synj1	93	58.788	Oryzias_latipes_hsok
ENSHGLG00000006420	SYNJ1	100	81.727	ENSOMEG00000014322	synj1	97	67.674	Oryzias_melastigma
ENSHGLG00000006420	SYNJ1	100	89.378	ENSOGAG00000006010	SYNJ1	100	86.548	Otolemur_garnettii
ENSHGLG00000006420	SYNJ1	100	96.170	ENSOARG00000013414	SYNJ1	98	88.784	Ovis_aries
ENSHGLG00000006420	SYNJ1	100	98.413	ENSPPAG00000026784	SYNJ1	100	93.974	Pan_paniscus
ENSHGLG00000006420	SYNJ1	100	98.268	ENSPPRG00000023469	SYNJ1	100	93.227	Panthera_pardus
ENSHGLG00000006420	SYNJ1	100	98.124	ENSPTIG00000007930	SYNJ1	100	93.151	Panthera_tigris_altaica
ENSHGLG00000006420	SYNJ1	100	98.413	ENSPTRG00000048135	-	100	90.107	Pan_troglodytes
ENSHGLG00000006420	SYNJ1	100	98.413	ENSPTRG00000023787	SYNJ1	100	93.974	Pan_troglodytes
ENSHGLG00000006420	SYNJ1	100	98.557	ENSPANG00000022531	SYNJ1	100	95.042	Papio_anubis
ENSHGLG00000006420	SYNJ1	100	83.741	ENSPKIG00000022603	synj1	94	76.687	Paramormyrops_kingsleyae
ENSHGLG00000006420	SYNJ1	100	82.014	ENSPMGG00000016831	synj1	91	66.566	Periophthalmus_magnuspinnatus
ENSHGLG00000006420	SYNJ1	100	97.258	ENSPEMG00000018767	Synj1	100	97.258	Peromyscus_maniculatus_bairdii
ENSHGLG00000006420	SYNJ1	100	63.701	ENSPMAG00000002887	synj1	96	53.185	Petromyzon_marinus
ENSHGLG00000006420	SYNJ1	100	92.785	ENSPCIG00000016372	SYNJ1	100	86.288	Phascolarctos_cinereus
ENSHGLG00000006420	SYNJ1	100	80.966	ENSPFOG00000016886	synj1	99	65.138	Poecilia_formosa
ENSHGLG00000006420	SYNJ1	100	81.871	ENSPLAG00000017559	synj1	95	64.602	Poecilia_latipinna
ENSHGLG00000006420	SYNJ1	100	81.439	ENSPMEG00000007643	synj1	89	61.804	Poecilia_mexicana
ENSHGLG00000006420	SYNJ1	100	82.014	ENSPREG00000012412	synj1	100	68.390	Poecilia_reticulata
ENSHGLG00000006420	SYNJ1	100	96.862	ENSPPYG00000011365	SYNJ1	98	92.609	Pongo_abelii
ENSHGLG00000006420	SYNJ1	87	92.857	ENSPCAG00000009906	SYNJ1	89	92.857	Procavia_capensis
ENSHGLG00000006420	SYNJ1	85	99.465	ENSPCOG00000024841	SYNJ1	99	87.082	Propithecus_coquereli
ENSHGLG00000006420	SYNJ1	100	96.291	ENSPVAG00000000892	SYNJ1	100	86.159	Pteropus_vampyrus
ENSHGLG00000006420	SYNJ1	100	82.014	ENSPNYG00000022989	synj1	100	67.283	Pundamilia_nyererei
ENSHGLG00000006420	SYNJ1	100	82.302	ENSPNAG00000021119	synj1	89	77.437	Pygocentrus_nattereri
ENSHGLG00000006420	SYNJ1	100	96.862	ENSRNOG00000002051	Synj1	100	93.683	Rattus_norvegicus
ENSHGLG00000006420	SYNJ1	100	98.413	ENSRBIG00000034477	SYNJ1	100	93.669	Rhinopithecus_bieti
ENSHGLG00000006420	SYNJ1	100	97.004	ENSRROG00000039256	SYNJ1	100	93.822	Rhinopithecus_roxellana
ENSHGLG00000006420	SYNJ1	100	98.557	ENSSBOG00000021001	SYNJ1	100	93.674	Saimiri_boliviensis_boliviensis
ENSHGLG00000006420	SYNJ1	100	92.352	ENSSHAG00000008538	SYNJ1	99	77.743	Sarcophilus_harrisii
ENSHGLG00000006420	SYNJ1	100	82.734	ENSSFOG00015006095	synj1	95	61.932	Scleropages_formosus
ENSHGLG00000006420	SYNJ1	100	82.158	ENSSMAG00000018066	synj1	94	65.627	Scophthalmus_maximus
ENSHGLG00000006420	SYNJ1	100	82.590	ENSSDUG00000013058	synj1	89	63.389	Seriola_dumerili
ENSHGLG00000006420	SYNJ1	100	82.158	ENSSLDG00000021406	synj1	96	67.295	Seriola_lalandi_dorsalis
ENSHGLG00000006420	SYNJ1	76	94.953	ENSSARG00000009490	SYNJ1	75	96.805	Sorex_araneus
ENSHGLG00000006420	SYNJ1	100	93.651	ENSSPUG00000012552	SYNJ1	100	74.654	Sphenodon_punctatus
ENSHGLG00000006420	SYNJ1	89	82.637	ENSSPAG00000006812	SYNJ1	96	58.482	Stegastes_partitus
ENSHGLG00000006420	SYNJ1	100	82.734	ENSSPAG00000017029	synj1	93	65.535	Stegastes_partitus
ENSHGLG00000006420	SYNJ1	100	98.268	ENSSSCG00000012035	SYNJ1	100	92.949	Sus_scrofa
ENSHGLG00000006420	SYNJ1	100	91.218	ENSTGUG00000013445	SYNJ1	100	76.792	Taeniopygia_guttata
ENSHGLG00000006420	SYNJ1	100	81.583	ENSTRUG00000006907	synj1	83	75.393	Takifugu_rubripes
ENSHGLG00000006420	SYNJ1	100	76.438	ENSTNIG00000009940	synj1	100	65.691	Tetraodon_nigroviridis
ENSHGLG00000006420	SYNJ1	92	98.396	ENSTBEG00000016298	SYNJ1	92	86.957	Tupaia_belangeri
ENSHGLG00000006420	SYNJ1	100	89.586	ENSTTRG00000002222	SYNJ1	100	79.849	Tursiops_truncatus
ENSHGLG00000006420	SYNJ1	100	98.413	ENSUAMG00000018606	SYNJ1	99	96.050	Ursus_americanus
ENSHGLG00000006420	SYNJ1	100	98.413	ENSUMAG00000018419	SYNJ1	99	96.050	Ursus_maritimus
ENSHGLG00000006420	SYNJ1	87	98.571	ENSVPAG00000001241	SYNJ1	87	98.571	Vicugna_pacos
ENSHGLG00000006420	SYNJ1	100	98.557	ENSVVUG00000023125	SYNJ1	100	94.584	Vulpes_vulpes
ENSHGLG00000006420	SYNJ1	100	85.127	ENSXETG00000009899	synj1	95	70.124	Xenopus_tropicalis
ENSHGLG00000006420	SYNJ1	100	80.797	ENSXCOG00000011896	synj1	97	68.216	Xiphophorus_couchianus
ENSHGLG00000006420	SYNJ1	100	80.512	ENSXMAG00000017524	synj1	100	68.694	Xiphophorus_maculatus