EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000006728 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 45848 bases
Position: chrJH602090.1:8943637-8989484
Accession: 101723742
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000009382	La	PF05383.17	4.4e-22	1	1
ENSHGLP00000009383	La	PF05383.17	8.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000009485	-	2905	-	ENSHGLP00000009381	14 (aa)	-	UPI000BAD5044
ENSHGLT00000009486	-	1020	XM_013075902	ENSHGLP00000009382	340 (aa)	XP_012931357	-
ENSHGLT00000009487	-	879	-	ENSHGLP00000009383	293 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000006728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000006728's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000006728	-	98	81.081	ENSHGLG00000013922	-	96	79.580

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000006728	-	98	87.063	ENSG00000138709	LARP1B	100	85.546	Homo_sapiens
ENSHGLG00000006728	-	99	86.136	ENSAMEG00000002748	LARP1B	100	85.841	Ailuropoda_melanoleuca
ENSHGLG00000006728	-	98	74.702	ENSANAG00000034618	LARP1B	96	74.405	Aotus_nancymaae
ENSHGLG00000006728	-	98	84.431	ENSBTAG00000012135	LARP1B	63	84.132	Bos_taurus
ENSHGLG00000006728	-	99	87.021	ENSCJAG00000003338	LARP1B	100	86.726	Callithrix_jacchus
ENSHGLG00000006728	-	99	86.301	ENSCAFG00020018899	LARP1B	100	85.959	Canis_lupus_dingo
ENSHGLG00000006728	-	99	83.959	ENSCHIG00000023144	LARP1B	100	83.618	Capra_hircus
ENSHGLG00000006728	-	99	83.505	ENSTSYG00000002037	-	99	83.162	Carlito_syrichta
ENSHGLG00000006728	-	75	93.750	ENSCPOG00000034668	-	92	93.750	Cavia_porcellus
ENSHGLG00000006728	-	99	86.982	ENSCCAG00000021948	LARP1B	99	86.686	Cebus_capucinus
ENSHGLG00000006728	-	99	83.186	ENSCATG00000013541	LARP1B	100	82.301	Cercocebus_atys
ENSHGLG00000006728	-	99	88.496	ENSCLAG00000006448	-	100	88.201	Chinchilla_lanigera
ENSHGLG00000006728	-	99	87.329	ENSCANG00000026958	LARP1B	100	86.986	Colobus_angolensis_palliatus
ENSHGLG00000006728	-	99	86.986	ENSCGRG00001004660	-	100	86.986	Cricetulus_griseus_chok1gshd
ENSHGLG00000006728	-	99	86.644	ENSCGRG00000001914	-	100	86.644	Cricetulus_griseus_crigri
ENSHGLG00000006728	-	98	83.784	ENSDNOG00000018765	-	64	83.483	Dasypus_novemcinctus
ENSHGLG00000006728	-	99	87.629	ENSEASG00005018106	LARP1B	99	87.285	Equus_asinus_asinus
ENSHGLG00000006728	-	99	85.841	ENSFCAG00000014650	-	100	85.546	Felis_catus
ENSHGLG00000006728	-	99	85.841	ENSGGOG00000015900	LARP1B	100	85.546	Gorilla_gorilla
ENSHGLG00000006728	-	98	81.081	ENSHGLG00100016491	-	96	79.580	Heterocephalus_glaber_male
ENSHGLG00000006728	-	100	98.235	ENSHGLG00100014041	-	96	99.278	Heterocephalus_glaber_male
ENSHGLG00000006728	-	99	85.959	ENSSTOG00000008596	-	100	84.071	Ictidomys_tridecemlineatus
ENSHGLG00000006728	-	96	69.231	ENSSTOG00000034510	-	87	69.538	Ictidomys_tridecemlineatus
ENSHGLG00000006728	-	99	74.627	ENSSTOG00000021917	-	94	74.627	Ictidomys_tridecemlineatus
ENSHGLG00000006728	-	89	70.722	ENSSTOG00000033183	-	96	70.079	Ictidomys_tridecemlineatus
ENSHGLG00000006728	-	99	81.787	ENSJJAG00000022360	Larp1b	99	81.787	Jaculus_jaculus
ENSHGLG00000006728	-	97	67.470	ENSLACG00000015247	LARP1B	84	66.667	Latimeria_chalumnae
ENSHGLG00000006728	-	99	86.982	ENSLAFG00000008473	-	99	86.686	Loxodonta_africana
ENSHGLG00000006728	-	99	63.699	ENSMFAG00000003306	-	93	85.517	Macaca_fascicularis
ENSHGLG00000006728	-	99	86.726	ENSMFAG00000002218	LARP1B	100	86.431	Macaca_fascicularis
ENSHGLG00000006728	-	99	86.726	ENSMMUG00000021347	LARP1B	100	86.431	Macaca_mulatta
ENSHGLG00000006728	-	64	86.713	ENSMNEG00000027747	-	89	86.713	Macaca_nemestrina
ENSHGLG00000006728	-	83	55.285	ENSMZEG00005002545	larp1b	53	53.285	Maylandia_zebra
ENSHGLG00000006728	-	99	85.959	ENSMAUG00000007879	-	100	85.959	Mesocricetus_auratus
ENSHGLG00000006728	-	97	64.242	ENSMICG00000028052	-	63	64.242	Microcebus_murinus
ENSHGLG00000006728	-	99	87.316	ENSMICG00000036111	LARP1B	100	87.021	Microcebus_murinus
ENSHGLG00000006728	-	98	78.276	ENSMICG00000037883	-	88	78.276	Microcebus_murinus
ENSHGLG00000006728	-	79	86.517	ENSMOCG00000001490	Larp1b	95	86.142	Microtus_ochrogaster
ENSHGLG00000006728	-	99	85.616	MGP_CAROLIEiJ_G0024962	Larp1b	100	85.274	Mus_caroli
ENSHGLG00000006728	-	99	85.616	ENSMUSG00000025762	Larp1b	100	85.274	Mus_musculus
ENSHGLG00000006728	-	99	85.616	MGP_PahariEiJ_G0026403	Larp1b	100	85.274	Mus_pahari
ENSHGLG00000006728	-	99	85.616	MGP_SPRETEiJ_G0025897	Larp1b	100	85.274	Mus_spretus
ENSHGLG00000006728	-	99	85.841	ENSNLEG00000013819	LARP1B	100	85.546	Nomascus_leucogenys
ENSHGLG00000006728	-	99	86.726	ENSODEG00000001292	-	100	86.431	Octodon_degus
ENSHGLG00000006728	-	99	85.546	ENSPPAG00000030439	LARP1B	100	85.251	Pan_paniscus
ENSHGLG00000006728	-	99	85.841	ENSPPRG00000002743	-	100	85.546	Panthera_pardus
ENSHGLG00000006728	-	99	85.841	ENSPTIG00000011225	LARP1B	100	85.546	Panthera_tigris_altaica
ENSHGLG00000006728	-	99	85.251	ENSPTRG00000016437	LARP1B	100	84.956	Pan_troglodytes
ENSHGLG00000006728	-	99	86.431	ENSPANG00000012488	LARP1B	100	86.136	Papio_anubis
ENSHGLG00000006728	-	98	80.952	ENSPCIG00000026516	LARP1B	86	80.967	Phascolarctos_cinereus
ENSHGLG00000006728	-	96	50.562	ENSPFOG00000022837	-	50	50.282	Poecilia_formosa
ENSHGLG00000006728	-	80	58.228	ENSPREG00000005955	-	89	53.819	Poecilia_reticulata
ENSHGLG00000006728	-	99	86.431	ENSPCOG00000021874	LARP1B	100	86.136	Propithecus_coquereli
ENSHGLG00000006728	-	99	86.726	ENSRNOG00000038366	Larp1b	100	86.431	Rattus_norvegicus
ENSHGLG00000006728	-	99	84.366	ENSRBIG00000039982	-	100	82.891	Rhinopithecus_bieti
ENSHGLG00000006728	-	99	77.581	ENSRBIG00000038568	-	92	77.286	Rhinopithecus_bieti
ENSHGLG00000006728	-	99	79.181	ENSRROG00000038525	-	96	78.840	Rhinopithecus_roxellana
ENSHGLG00000006728	-	99	86.726	ENSRROG00000030771	LARP1B	100	86.431	Rhinopithecus_roxellana
ENSHGLG00000006728	-	99	55.017	ENSSSCG00000040491	-	99	52.055	Sus_scrofa
ENSHGLG00000006728	-	98	85.285	ENSSSCG00000034280	LARP1B	63	84.985	Sus_scrofa
ENSHGLG00000006728	-	99	76.106	ENSUAMG00000016938	-	91	88.757	Ursus_americanus
ENSHGLG00000006728	-	98	86.186	ENSVVUG00000011307	LARP1B	65	85.886	Vulpes_vulpes