EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000006889 (Gene tree)
Gene ID: -
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 24759 bases
Position: chrJH602168.1:3087365-3112123
Accession: 101709845
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000009604	CAF1	PF04857.20	5.9e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000009711	PNLDC1-201	4676	XM_004869014	ENSHGLP00000009604	531 (aa)	XP_004869071	UPI0003500E39

Gene Model

Click here to download ENSHGLG00000006889's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000006889's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000006889	PNLDC1	99	84.906	ENSG00000146453	PNLDC1	99	84.906	Homo_sapiens
ENSHGLG00000006889	PNLDC1	99	85.038	ENSAMEG00000015371	PNLDC1	99	85.038	Ailuropoda_melanoleuca
ENSHGLG00000006889	PNLDC1	95	59.608	ENSAPLG00000007014	PNLDC1	97	59.608	Anas_platyrhynchos
ENSHGLG00000006889	PNLDC1	99	58.945	ENSACAG00000013667	PNLDC1	99	58.945	Anolis_carolinensis
ENSHGLG00000006889	PNLDC1	100	83.804	ENSANAG00000034713	PNLDC1	100	84.540	Aotus_nancymaae
ENSHGLG00000006889	PNLDC1	95	87.078	ENSBTAG00000015166	PNLDC1	95	87.078	Bos_taurus
ENSHGLG00000006889	PNLDC1	100	83.427	ENSCJAG00000011865	PNLDC1	100	83.427	Callithrix_jacchus
ENSHGLG00000006889	PNLDC1	100	86.441	ENSCAFG00000000740	PNLDC1	100	86.441	Canis_familiaris
ENSHGLG00000006889	PNLDC1	100	83.677	ENSCAFG00020017742	PNLDC1	100	83.677	Canis_lupus_dingo
ENSHGLG00000006889	PNLDC1	100	84.586	ENSCHIG00000003141	PNLDC1	100	84.586	Capra_hircus
ENSHGLG00000006889	PNLDC1	100	83.239	ENSTSYG00000005606	PNLDC1	100	83.239	Carlito_syrichta
ENSHGLG00000006889	PNLDC1	100	71.563	ENSCAPG00000011893	PNLDC1	100	71.563	Cavia_aperea
ENSHGLG00000006889	PNLDC1	100	88.346	ENSCPOG00000019565	PNLDC1	100	88.346	Cavia_porcellus
ENSHGLG00000006889	PNLDC1	100	83.992	ENSCCAG00000026232	PNLDC1	100	83.992	Cebus_capucinus
ENSHGLG00000006889	PNLDC1	100	85.122	ENSCATG00000033196	PNLDC1	100	85.122	Cercocebus_atys
ENSHGLG00000006889	PNLDC1	99	94.528	ENSCLAG00000003228	PNLDC1	99	94.528	Chinchilla_lanigera
ENSHGLG00000006889	PNLDC1	95	84.676	ENSCSAG00000012478	PNLDC1	98	84.676	Chlorocebus_sabaeus
ENSHGLG00000006889	PNLDC1	96	65.625	ENSCPBG00000004050	PNLDC1	100	65.625	Chrysemys_picta_bellii
ENSHGLG00000006889	PNLDC1	95	85.375	ENSCANG00000043076	PNLDC1	97	85.375	Colobus_angolensis_palliatus
ENSHGLG00000006889	PNLDC1	100	64.218	ENSCGRG00001011981	-	99	64.218	Cricetulus_griseus_chok1gshd
ENSHGLG00000006889	PNLDC1	100	80.603	ENSCGRG00001007470	-	99	80.603	Cricetulus_griseus_chok1gshd
ENSHGLG00000006889	PNLDC1	100	66.855	ENSCGRG00000003103	-	99	66.855	Cricetulus_griseus_crigri
ENSHGLG00000006889	PNLDC1	100	80.603	ENSCGRG00000010221	-	99	80.603	Cricetulus_griseus_crigri
ENSHGLG00000006889	PNLDC1	100	82.331	ENSDNOG00000013709	PNLDC1	100	82.331	Dasypus_novemcinctus
ENSHGLG00000006889	PNLDC1	100	80.150	ENSDORG00000011517	Pnldc1	99	87.540	Dipodomys_ordii
ENSHGLG00000006889	PNLDC1	93	73.428	ENSETEG00000007587	PNLDC1	99	73.428	Echinops_telfairi
ENSHGLG00000006889	PNLDC1	100	78.439	ENSEASG00005019029	PNLDC1	100	78.439	Equus_asinus_asinus
ENSHGLG00000006889	PNLDC1	100	85.876	ENSECAG00000012898	PNLDC1	100	85.876	Equus_caballus
ENSHGLG00000006889	PNLDC1	67	81.250	ENSEEUG00000005717	-	86	81.250	Erinaceus_europaeus
ENSHGLG00000006889	PNLDC1	100	86.252	ENSFCAG00000002848	PNLDC1	100	86.252	Felis_catus
ENSHGLG00000006889	PNLDC1	94	58.449	ENSFALG00000012081	PNLDC1	99	58.449	Ficedula_albicollis
ENSHGLG00000006889	PNLDC1	100	95.669	ENSFDAG00000021334	PNLDC1	100	95.669	Fukomys_damarensis
ENSHGLG00000006889	PNLDC1	79	58.670	ENSGALG00000011624	PNLDC1	82	58.670	Gallus_gallus
ENSHGLG00000006889	PNLDC1	99	65.849	ENSGAGG00000015276	PNLDC1	100	66.942	Gopherus_agassizii
ENSHGLG00000006889	PNLDC1	100	84.746	ENSGGOG00000014077	PNLDC1	100	84.746	Gorilla_gorilla
ENSHGLG00000006889	PNLDC1	100	100.000	ENSHGLG00100018275	PNLDC1	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000006889	PNLDC1	99	89.036	ENSSTOG00000005595	PNLDC1	99	89.036	Ictidomys_tridecemlineatus
ENSHGLG00000006889	PNLDC1	99	80.076	ENSJJAG00000009937	Pnldc1	99	80.076	Jaculus_jaculus
ENSHGLG00000006889	PNLDC1	59	82.540	ENSLAFG00000030189	PNLDC1	92	82.540	Loxodonta_africana
ENSHGLG00000006889	PNLDC1	100	85.687	ENSMFAG00000041296	PNLDC1	100	85.687	Macaca_fascicularis
ENSHGLG00000006889	PNLDC1	100	85.687	ENSMMUG00000004181	PNLDC1	100	85.687	Macaca_mulatta
ENSHGLG00000006889	PNLDC1	100	85.499	ENSMNEG00000034271	PNLDC1	100	85.499	Macaca_nemestrina
ENSHGLG00000006889	PNLDC1	100	82.674	ENSMLEG00000044059	PNLDC1	100	82.674	Mandrillus_leucophaeus
ENSHGLG00000006889	PNLDC1	95	58.858	ENSMGAG00000012470	PNLDC1	97	58.858	Meleagris_gallopavo
ENSHGLG00000006889	PNLDC1	99	65.103	ENSMAUG00000012298	Pnldc1	100	65.103	Mesocricetus_auratus
ENSHGLG00000006889	PNLDC1	100	84.369	ENSMICG00000008021	PNLDC1	100	84.369	Microcebus_murinus
ENSHGLG00000006889	PNLDC1	100	85.741	ENSMOCG00000014287	Pnldc1	100	85.741	Microtus_ochrogaster
ENSHGLG00000006889	PNLDC1	99	74.669	ENSMODG00000007420	PNLDC1	99	74.669	Monodelphis_domestica
ENSHGLG00000006889	PNLDC1	100	87.006	MGP_CAROLIEiJ_G0021045	Pnldc1	100	87.006	Mus_caroli
ENSHGLG00000006889	PNLDC1	100	87.006	ENSMUSG00000073460	Pnldc1	100	89.524	Mus_musculus
ENSHGLG00000006889	PNLDC1	100	86.441	MGP_PahariEiJ_G0023361	Pnldc1	100	86.441	Mus_pahari
ENSHGLG00000006889	PNLDC1	100	86.252	MGP_SPRETEiJ_G0021975	Pnldc1	100	86.252	Mus_spretus
ENSHGLG00000006889	PNLDC1	99	86.174	ENSMPUG00000004920	PNLDC1	99	86.174	Mustela_putorius_furo
ENSHGLG00000006889	PNLDC1	100	84.557	ENSMLUG00000000747	PNLDC1	100	84.557	Myotis_lucifugus
ENSHGLG00000006889	PNLDC1	100	87.382	ENSNGAG00000017714	Pnldc1	99	87.382	Nannospalax_galili
ENSHGLG00000006889	PNLDC1	95	84.418	ENSNLEG00000011282	PNLDC1	98	84.418	Nomascus_leucogenys
ENSHGLG00000006889	PNLDC1	54	64.931	ENSMEUG00000014042	-	100	64.931	Notamacropus_eugenii
ENSHGLG00000006889	PNLDC1	60	62.500	ENSMEUG00000011926	-	64	62.500	Notamacropus_eugenii
ENSHGLG00000006889	PNLDC1	79	82.979	ENSOPRG00000003813	PNLDC1	79	82.979	Ochotona_princeps
ENSHGLG00000006889	PNLDC1	100	95.480	ENSODEG00000008047	PNLDC1	100	95.480	Octodon_degus
ENSHGLG00000006889	PNLDC1	99	56.604	ENSOANG00000012199	PNLDC1	99	59.245	Ornithorhynchus_anatinus
ENSHGLG00000006889	PNLDC1	100	84.934	ENSOCUG00000013867	PNLDC1	100	84.934	Oryctolagus_cuniculus
ENSHGLG00000006889	PNLDC1	99	86.011	ENSOGAG00000007331	PNLDC1	100	86.011	Otolemur_garnettii
ENSHGLG00000006889	PNLDC1	100	84.934	ENSOARG00000004585	PNLDC1	100	84.934	Ovis_aries
ENSHGLG00000006889	PNLDC1	100	84.369	ENSPPAG00000026651	PNLDC1	100	84.369	Pan_paniscus
ENSHGLG00000006889	PNLDC1	100	85.876	ENSPPRG00000012854	PNLDC1	100	85.876	Panthera_pardus
ENSHGLG00000006889	PNLDC1	99	81.629	ENSPTIG00000011501	PNLDC1	99	81.629	Panthera_tigris_altaica
ENSHGLG00000006889	PNLDC1	100	84.369	ENSPTRG00000018762	PNLDC1	100	84.369	Pan_troglodytes
ENSHGLG00000006889	PNLDC1	100	85.499	ENSPANG00000022009	PNLDC1	100	85.499	Papio_anubis
ENSHGLG00000006889	PNLDC1	100	86.817	ENSPEMG00000016301	Pnldc1	99	86.817	Peromyscus_maniculatus_bairdii
ENSHGLG00000006889	PNLDC1	83	76.538	ENSPCIG00000023412	PNLDC1	100	76.538	Phascolarctos_cinereus
ENSHGLG00000006889	PNLDC1	100	78.918	ENSPPYG00000017148	PNLDC1	100	78.918	Pongo_abelii
ENSHGLG00000006889	PNLDC1	99	73.396	ENSPCAG00000014169	PNLDC1	99	73.396	Procavia_capensis
ENSHGLG00000006889	PNLDC1	100	84.746	ENSPCOG00000025722	PNLDC1	100	84.746	Propithecus_coquereli
ENSHGLG00000006889	PNLDC1	73	88.831	ENSPVAG00000005325	PNLDC1	73	88.831	Pteropus_vampyrus
ENSHGLG00000006889	PNLDC1	100	86.064	ENSRNOG00000023140	Pnldc1	100	90.000	Rattus_norvegicus
ENSHGLG00000006889	PNLDC1	100	85.122	ENSRBIG00000033806	PNLDC1	100	85.122	Rhinopithecus_bieti
ENSHGLG00000006889	PNLDC1	95	85.771	ENSRROG00000043919	PNLDC1	97	85.771	Rhinopithecus_roxellana
ENSHGLG00000006889	PNLDC1	100	84.369	ENSSBOG00000019135	PNLDC1	100	84.369	Saimiri_boliviensis_boliviensis
ENSHGLG00000006889	PNLDC1	95	75.842	ENSSHAG00000015192	PNLDC1	97	75.842	Sarcophilus_harrisii
ENSHGLG00000006889	PNLDC1	54	65.035	ENSSPUG00000004627	PNLDC1	100	65.487	Sphenodon_punctatus
ENSHGLG00000006889	PNLDC1	96	84.314	ENSSSCG00000004046	PNLDC1	99	84.314	Sus_scrofa
ENSHGLG00000006889	PNLDC1	91	59.381	ENSTGUG00000011418	PNLDC1	99	59.381	Taeniopygia_guttata
ENSHGLG00000006889	PNLDC1	96	75.294	ENSTBEG00000009131	PNLDC1	98	75.294	Tupaia_belangeri
ENSHGLG00000006889	PNLDC1	73	80.829	ENSTTRG00000010409	PNLDC1	73	80.829	Tursiops_truncatus
ENSHGLG00000006889	PNLDC1	99	72.643	ENSUAMG00000015783	PNLDC1	99	72.643	Ursus_americanus
ENSHGLG00000006889	PNLDC1	95	78.082	ENSUMAG00000011903	PNLDC1	99	78.082	Ursus_maritimus
ENSHGLG00000006889	PNLDC1	96	87.084	ENSVVUG00000006586	PNLDC1	99	86.448	Vulpes_vulpes