EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000007270 (Gene tree)
Gene ID: -
Gene Symbol: RNF17
Alias: FLJ11045|Mmip-2|SPATA23|TDRD4
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 177000 bases
Position: chrJH602089.1:18248162-18425161
Accession: 101716173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000010136	TUDOR	PF00567.24	1.1e-82	1	5
ENSHGLP00000010136	TUDOR	PF00567.24	1.1e-82	2	5
ENSHGLP00000010136	TUDOR	PF00567.24	1.1e-82	3	5
ENSHGLP00000010136	TUDOR	PF00567.24	1.1e-82	4	5
ENSHGLP00000010136	TUDOR	PF00567.24	1.1e-82	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000010250	RNF17-201	5920	XM_004854898	ENSHGLP00000010136	1642 (aa)	XP_021092053	UPI000A34069E

Gene Model

Click here to download ENSHGLG00000007270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000007270's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000007270	RNF17	100	75.423	ENSG00000132972	RNF17	99	81.265	Homo_sapiens
ENSHGLG00000007270	RNF17	81	31.443	ENSAPOG00000017034	rnf17	74	34.507	Acanthochromis_polyacanthus
ENSHGLG00000007270	RNF17	100	78.174	ENSAMEG00000017340	RNF17	100	78.174	Ailuropoda_melanoleuca
ENSHGLG00000007270	RNF17	97	31.595	ENSAOCG00000018283	rnf17	98	31.461	Amphiprion_ocellaris
ENSHGLG00000007270	RNF17	73	33.803	ENSAPEG00000022338	rnf17	83	33.803	Amphiprion_percula
ENSHGLG00000007270	RNF17	70	35.304	ENSATEG00000002067	rnf17	79	35.447	Anabas_testudineus
ENSHGLG00000007270	RNF17	88	48.526	ENSAPLG00000003969	RNF17	100	48.663	Anas_platyrhynchos
ENSHGLG00000007270	RNF17	92	45.443	ENSACAG00000001418	RNF17	94	45.311	Anolis_carolinensis
ENSHGLG00000007270	RNF17	92	75.109	ENSANAG00000029969	RNF17	95	75.109	Aotus_nancymaae
ENSHGLG00000007270	RNF17	97	30.625	ENSACLG00000018279	rnf17	87	34.631	Astatotilapia_calliptera
ENSHGLG00000007270	RNF17	73	37.393	ENSAMXG00000011002	rnf17	79	36.585	Astyanax_mexicanus
ENSHGLG00000007270	RNF17	50	76.855	ENSBTAG00000000278	RNF17	100	76.855	Bos_taurus
ENSHGLG00000007270	RNF17	100	73.792	ENSCJAG00000018937	RNF17	100	74.591	Callithrix_jacchus
ENSHGLG00000007270	RNF17	98	78.086	ENSCAFG00000007418	RNF17	100	80.938	Canis_familiaris
ENSHGLG00000007270	RNF17	97	77.486	ENSCHIG00000026716	RNF17	99	79.495	Capra_hircus
ENSHGLG00000007270	RNF17	97	74.504	ENSTSYG00000000365	RNF17	99	74.504	Carlito_syrichta
ENSHGLG00000007270	RNF17	82	71.831	ENSCAPG00000012908	RNF17	99	71.831	Cavia_aperea
ENSHGLG00000007270	RNF17	100	74.457	ENSCCAG00000026725	RNF17	99	75.929	Cebus_capucinus
ENSHGLG00000007270	RNF17	100	74.879	ENSCATG00000040352	RNF17	100	76.377	Cercocebus_atys
ENSHGLG00000007270	RNF17	100	85.905	ENSCLAG00000004127	RNF17	100	85.905	Chinchilla_lanigera
ENSHGLG00000007270	RNF17	100	75.181	ENSCSAG00000018019	RNF17	100	75.181	Chlorocebus_sabaeus
ENSHGLG00000007270	RNF17	90	81.356	ENSCHOG00000013310	RNF17	91	81.356	Choloepus_hoffmanni
ENSHGLG00000007270	RNF17	92	55.279	ENSCPBG00000020920	RNF17	97	55.607	Chrysemys_picta_bellii
ENSHGLG00000007270	RNF17	99	74.562	ENSCANG00000032927	RNF17	99	76.298	Colobus_angolensis_palliatus
ENSHGLG00000007270	RNF17	100	77.245	ENSCGRG00001022658	Rnf17	100	77.245	Cricetulus_griseus_chok1gshd
ENSHGLG00000007270	RNF17	100	77.245	ENSCGRG00000009924	Rnf17	100	77.245	Cricetulus_griseus_crigri
ENSHGLG00000007270	RNF17	66	32.677	ENSCSEG00000008626	rnf17	77	32.345	Cynoglossus_semilaevis
ENSHGLG00000007270	RNF17	67	32.435	ENSCVAG00000017008	rnf17	83	32.435	Cyprinodon_variegatus
ENSHGLG00000007270	RNF17	97	30.827	ENSDARG00000056387	rnf17	98	30.764	Danio_rerio
ENSHGLG00000007270	RNF17	99	77.879	ENSDNOG00000006115	RNF17	99	77.879	Dasypus_novemcinctus
ENSHGLG00000007270	RNF17	72	87.500	ENSETEG00000017874	-	73	87.500	Echinops_telfairi
ENSHGLG00000007270	RNF17	100	79.770	ENSECAG00000017152	RNF17	99	79.770	Equus_caballus
ENSHGLG00000007270	RNF17	83	66.166	ENSEEUG00000000332	RNF17	90	66.166	Erinaceus_europaeus
ENSHGLG00000007270	RNF17	87	36.177	ENSELUG00000005626	rnf17	87	35.883	Esox_lucius
ENSHGLG00000007270	RNF17	100	78.127	ENSFCAG00000004914	RNF17	100	78.603	Felis_catus
ENSHGLG00000007270	RNF17	86	49.960	ENSFALG00000008766	RNF17	90	50.908	Ficedula_albicollis
ENSHGLG00000007270	RNF17	100	88.039	ENSFDAG00000017857	RNF17	100	88.039	Fukomys_damarensis
ENSHGLG00000007270	RNF17	98	31.280	ENSFHEG00000014822	rnf17	99	31.135	Fundulus_heteroclitus
ENSHGLG00000007270	RNF17	60	34.714	ENSGMOG00000015560	-	98	34.714	Gadus_morhua
ENSHGLG00000007270	RNF17	72	32.394	ENSGAFG00000004463	rnf17	89	32.537	Gambusia_affinis
ENSHGLG00000007270	RNF17	88	53.502	ENSGAGG00000016999	RNF17	90	53.863	Gopherus_agassizii
ENSHGLG00000007270	RNF17	100	75.483	ENSGGOG00000014491	RNF17	99	80.045	Gorilla_gorilla
ENSHGLG00000007270	RNF17	97	30.615	ENSHBUG00000003554	rnf17	74	34.684	Haplochromis_burtoni
ENSHGLG00000007270	RNF17	100	99.878	ENSHGLG00100017393	RNF17	100	99.878	Heterocephalus_glaber_male
ENSHGLG00000007270	RNF17	62	41.304	ENSHCOG00000017676	rnf17	78	41.304	Hippocampus_comes
ENSHGLG00000007270	RNF17	73	35.251	ENSIPUG00000001087	rnf17	80	34.922	Ictalurus_punctatus
ENSHGLG00000007270	RNF17	100	77.198	ENSJJAG00000016584	Rnf17	100	77.198	Jaculus_jaculus
ENSHGLG00000007270	RNF17	86	30.213	ENSLBEG00000014910	rnf17	73	33.245	Labrus_bergylta
ENSHGLG00000007270	RNF17	88	46.043	ENSLACG00000000323	RNF17	100	46.043	Latimeria_chalumnae
ENSHGLG00000007270	RNF17	100	75.121	ENSMFAG00000032388	RNF17	100	76.612	Macaca_fascicularis
ENSHGLG00000007270	RNF17	100	76.268	ENSMMUG00000014610	RNF17	100	79.491	Macaca_mulatta
ENSHGLG00000007270	RNF17	100	75.060	ENSMNEG00000011234	RNF17	100	79.491	Macaca_nemestrina
ENSHGLG00000007270	RNF17	100	74.577	ENSMLEG00000030227	RNF17	100	76.312	Mandrillus_leucophaeus
ENSHGLG00000007270	RNF17	73	33.167	ENSMAMG00000020403	rnf17	87	33.167	Mastacembelus_armatus
ENSHGLG00000007270	RNF17	97	30.625	ENSMZEG00005019166	rnf17	87	34.631	Maylandia_zebra
ENSHGLG00000007270	RNF17	76	50.396	ENSMGAG00000015138	RNF17	99	50.396	Meleagris_gallopavo
ENSHGLG00000007270	RNF17	99	74.453	ENSMAUG00000004788	Rnf17	100	74.256	Mesocricetus_auratus
ENSHGLG00000007270	RNF17	100	78.416	ENSMICG00000010364	RNF17	100	78.416	Microcebus_murinus
ENSHGLG00000007270	RNF17	54	80.322	ENSMOCG00000011818	-	100	80.322	Microtus_ochrogaster
ENSHGLG00000007270	RNF17	73	41.727	ENSMMOG00000019514	rnf17	82	41.727	Mola_mola
ENSHGLG00000007270	RNF17	99	67.362	ENSMODG00000007827	RNF17	97	67.362	Monodelphis_domestica
ENSHGLG00000007270	RNF17	67	35.593	ENSMALG00000016943	rnf17	75	35.326	Monopterus_albus
ENSHGLG00000007270	RNF17	100	76.228	MGP_CAROLIEiJ_G0019337	Rnf17	100	76.228	Mus_caroli
ENSHGLG00000007270	RNF17	100	75.682	ENSMUSG00000000365	Rnf17	100	75.682	Mus_musculus
ENSHGLG00000007270	RNF17	100	75.985	MGP_PahariEiJ_G0030355	Rnf17	100	75.985	Mus_pahari
ENSHGLG00000007270	RNF17	100	75.743	MGP_SPRETEiJ_G0020228	Rnf17	100	75.743	Mus_spretus
ENSHGLG00000007270	RNF17	100	79.043	ENSMPUG00000013305	RNF17	100	79.043	Mustela_putorius_furo
ENSHGLG00000007270	RNF17	100	77.778	ENSMLUG00000003903	RNF17	100	77.778	Myotis_lucifugus
ENSHGLG00000007270	RNF17	100	75.455	ENSNGAG00000013553	Rnf17	100	75.455	Nannospalax_galili
ENSHGLG00000007270	RNF17	73	36.085	ENSNBRG00000012006	rnf17	85	35.286	Neolamprologus_brichardi
ENSHGLG00000007270	RNF17	100	75.181	ENSNLEG00000013780	RNF17	100	79.716	Nomascus_leucogenys
ENSHGLG00000007270	RNF17	66	66.301	ENSMEUG00000003276	-	60	66.301	Notamacropus_eugenii
ENSHGLG00000007270	RNF17	85	68.644	ENSOPRG00000016743	-	88	68.644	Ochotona_princeps
ENSHGLG00000007270	RNF17	97	30.910	ENSONIG00000015746	rnf17	99	34.959	Oreochromis_niloticus
ENSHGLG00000007270	RNF17	100	78.714	ENSOCUG00000007384	RNF17	100	78.654	Oryctolagus_cuniculus
ENSHGLG00000007270	RNF17	88	32.473	ENSORLG00000012818	rnf17	99	32.769	Oryzias_latipes
ENSHGLG00000007270	RNF17	97	31.074	ENSORLG00020009879	-	98	31.660	Oryzias_latipes_hni
ENSHGLG00000007270	RNF17	73	34.200	ENSORLG00015013027	-	75	35.155	Oryzias_latipes_hsok
ENSHGLG00000007270	RNF17	66	33.001	ENSOMEG00000009891	rnf17	85	33.364	Oryzias_melastigma
ENSHGLG00000007270	RNF17	100	75.995	ENSOGAG00000014803	RNF17	100	75.995	Otolemur_garnettii
ENSHGLG00000007270	RNF17	98	77.943	ENSOARG00000014641	RNF17	99	77.819	Ovis_aries
ENSHGLG00000007270	RNF17	93	79.669	ENSPPAG00000028779	RNF17	99	79.669	Pan_paniscus
ENSHGLG00000007270	RNF17	100	77.583	ENSPPRG00000009230	RNF17	100	78.009	Panthera_pardus
ENSHGLG00000007270	RNF17	100	77.704	ENSPTIG00000001738	RNF17	100	78.158	Panthera_tigris_altaica
ENSHGLG00000007270	RNF17	100	75.181	ENSPTRG00000005713	RNF17	99	79.593	Pan_troglodytes
ENSHGLG00000007270	RNF17	100	74.819	ENSPANG00000007640	RNF17	100	79.192	Papio_anubis
ENSHGLG00000007270	RNF17	76	34.929	ENSPKIG00000001648	rnf17	90	35.155	Paramormyrops_kingsleyae
ENSHGLG00000007270	RNF17	73	59.362	ENSPSIG00000011245	RNF17	100	59.526	Pelodiscus_sinensis
ENSHGLG00000007270	RNF17	100	77.441	ENSPEMG00000008693	Rnf17	100	77.441	Peromyscus_maniculatus_bairdii
ENSHGLG00000007270	RNF17	60	69.222	ENSPCIG00000009190	-	92	69.222	Phascolarctos_cinereus
ENSHGLG00000007270	RNF17	97	30.372	ENSPFOG00000007124	rnf17	74	33.603	Poecilia_formosa
ENSHGLG00000007270	RNF17	97	31.012	ENSPLAG00000006198	rnf17	98	30.737	Poecilia_latipinna
ENSHGLG00000007270	RNF17	97	30.955	ENSPMEG00000022432	rnf17	98	30.653	Poecilia_mexicana
ENSHGLG00000007270	RNF17	68	44.203	ENSPREG00000001414	rnf17	82	44.203	Poecilia_reticulata
ENSHGLG00000007270	RNF17	100	75.543	ENSPPYG00000005215	RNF17	100	75.543	Pongo_abelii
ENSHGLG00000007270	RNF17	73	81.579	ENSPCAG00000002665	RNF17	76	81.579	Procavia_capensis
ENSHGLG00000007270	RNF17	93	61.329	ENSPCOG00000020211	RNF17	97	61.329	Propithecus_coquereli
ENSHGLG00000007270	RNF17	100	67.784	ENSPVAG00000013021	RNF17	100	67.784	Pteropus_vampyrus
ENSHGLG00000007270	RNF17	73	34.631	ENSPNAG00000027505	rnf17	85	34.631	Pygocentrus_nattereri
ENSHGLG00000007270	RNF17	100	75.682	ENSRNOG00000008059	Rnf17	100	75.682	Rattus_norvegicus
ENSHGLG00000007270	RNF17	100	73.881	ENSRBIG00000027010	RNF17	100	76.090	Rhinopithecus_bieti
ENSHGLG00000007270	RNF17	100	74.336	ENSRROG00000022801	RNF17	100	79.054	Rhinopithecus_roxellana
ENSHGLG00000007270	RNF17	99	74.498	ENSSBOG00000021661	RNF17	99	76.077	Saimiri_boliviensis_boliviensis
ENSHGLG00000007270	RNF17	99	67.117	ENSSHAG00000005609	RNF17	99	67.117	Sarcophilus_harrisii
ENSHGLG00000007270	RNF17	67	47.093	ENSSFOG00015023037	rnf17	89	47.500	Scleropages_formosus
ENSHGLG00000007270	RNF17	89	30.073	ENSSMAG00000007429	rnf17	75	33.391	Scophthalmus_maximus
ENSHGLG00000007270	RNF17	70	33.806	ENSSDUG00000013530	rnf17	77	34.561	Seriola_dumerili
ENSHGLG00000007270	RNF17	86	31.276	ENSSLDG00000019577	rnf17	75	34.676	Seriola_lalandi_dorsalis
ENSHGLG00000007270	RNF17	100	72.146	ENSSARG00000003016	RNF17	94	72.146	Sorex_araneus
ENSHGLG00000007270	RNF17	87	50.831	ENSSPUG00000008917	RNF17	96	50.831	Sphenodon_punctatus
ENSHGLG00000007270	RNF17	84	30.413	ENSSPAG00000001925	rnf17	75	33.364	Stegastes_partitus
ENSHGLG00000007270	RNF17	100	72.283	ENSSSCG00000009572	RNF17	99	77.586	Sus_scrofa
ENSHGLG00000007270	RNF17	52	53.701	ENSTGUG00000011267	-	100	53.701	Taeniopygia_guttata
ENSHGLG00000007270	RNF17	76	32.919	ENSTRUG00000015498	rnf17	77	32.986	Takifugu_rubripes
ENSHGLG00000007270	RNF17	73	33.498	ENSTNIG00000015681	rnf17	100	33.498	Tetraodon_nigroviridis
ENSHGLG00000007270	RNF17	100	60.683	ENSTBEG00000000282	RNF17	100	60.683	Tupaia_belangeri
ENSHGLG00000007270	RNF17	99	70.030	ENSTTRG00000012698	RNF17	99	69.831	Tursiops_truncatus
ENSHGLG00000007270	RNF17	83	87.324	ENSVPAG00000011388	RNF17	85	87.324	Vicugna_pacos
ENSHGLG00000007270	RNF17	95	84.115	ENSVVUG00000006226	RNF17	100	84.115	Vulpes_vulpes
ENSHGLG00000007270	RNF17	70	41.745	ENSXETG00000034020	RNF17	100	42.251	Xenopus_tropicalis
ENSHGLG00000007270	RNF17	86	30.068	ENSXCOG00000018295	rnf17	76	33.244	Xiphophorus_couchianus
ENSHGLG00000007270	RNF17	86	30.353	ENSXMAG00000014747	rnf17	77	33.333	Xiphophorus_maculatus