EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000007909 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: poly(A) polymerase alpha
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 68848 bases
Position: chrJH602047.1:6847823-6916670
Accession: 101714424
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000011027	PAP_RNA-bind	PF04926.15	5.7e-25	1	1
ENSHGLP00000011028	PAP_RNA-bind	PF04926.15	1.2e-23	1	1
ENSHGLP00000011025	PAP_RNA-bind	PF04926.15	4.9e-23	1	1
ENSHGLP00000011026	PAP_RNA-bind	PF04926.15	6e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000011149	-	4404	XM_004836986	ENSHGLP00000011025	718 (aa)	XP_004837043	UPI00034F7EC8
ENSHGLT00000011152	-	2193	-	ENSHGLP00000011028	730 (aa)	-	-
ENSHGLT00000011151	-	2082	-	ENSHGLP00000011027	693 (aa)	-	-
ENSHGLT00000011150	-	2220	XM_013066633	ENSHGLP00000011026	739 (aa)	XP_012922087	UPI000A343944

Gene Model

Click here to download ENSHGLG00000007909's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000007909's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000007909	-	99	61.477	ENSHGLG00000019610	PAPOLG	99	61.342
ENSHGLG00000007909	-	87	75.541	ENSHGLG00000002987	-	98	75.374
ENSHGLG00000007909	-	99	86.785	ENSHGLG00000017457	-	100	85.831
ENSHGLG00000007909	-	100	80.514	ENSHGLG00000007467	-	100	80.650

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000007909	-	100	96.961	ENSG00000090060	PAPOLA	100	96.961	Homo_sapiens
ENSHGLG00000007909	-	99	96.748	ENSAMEG00000014142	PAPOLA	99	96.748	Ailuropoda_melanoleuca
ENSHGLG00000007909	-	99	90.921	ENSAPLG00000006645	PAPOLA	99	90.921	Anas_platyrhynchos
ENSHGLG00000007909	-	99	91.204	ENSACAG00000013474	PAPOLA	99	94.841	Anolis_carolinensis
ENSHGLG00000007909	-	77	91.199	ENSANAG00000027941	-	98	91.199	Aotus_nancymaae
ENSHGLG00000007909	-	100	96.685	ENSANAG00000018274	PAPOLA	99	99.081	Aotus_nancymaae
ENSHGLG00000007909	-	100	73.534	ENSAMXG00000018141	papola	99	85.379	Astyanax_mexicanus
ENSHGLG00000007909	-	100	97.114	ENSBTAG00000004054	PAPOLA	100	97.114	Bos_taurus
ENSHGLG00000007909	-	100	96.853	ENSCJAG00000006512	PAPOLA	99	99.081	Callithrix_jacchus
ENSHGLG00000007909	-	100	96.107	ENSCAFG00000017783	PAPOLA	100	96.107	Canis_familiaris
ENSHGLG00000007909	-	100	96.797	ENSCAFG00020011550	PAPOLA	100	96.797	Canis_lupus_dingo
ENSHGLG00000007909	-	100	96.211	ENSCHIG00000025004	-	100	96.211	Capra_hircus
ENSHGLG00000007909	-	99	96.667	ENSTSYG00000012384	PAPOLA	99	96.667	Carlito_syrichta
ENSHGLG00000007909	-	100	94.723	ENSCPOG00000002648	PAPOLA	100	94.723	Cavia_porcellus
ENSHGLG00000007909	-	100	96.685	ENSCCAG00000025120	PAPOLA	98	98.701	Cebus_capucinus
ENSHGLG00000007909	-	100	96.823	ENSCATG00000018815	PAPOLA	99	99.255	Cercocebus_atys
ENSHGLG00000007909	-	100	98.846	ENSCLAG00000016342	PAPOLA	100	98.846	Chinchilla_lanigera
ENSHGLG00000007909	-	100	96.779	ENSCSAG00000010516	PAPOLA	100	96.779	Chlorocebus_sabaeus
ENSHGLG00000007909	-	72	82.289	ENSCHOG00000001115	PAPOLA	72	82.289	Choloepus_hoffmanni
ENSHGLG00000007909	-	100	92.568	ENSCPBG00000024125	PAPOLA	100	92.568	Chrysemys_picta_bellii
ENSHGLG00000007909	-	99	91.521	ENSCANG00000000159	PAPOLA	100	91.521	Colobus_angolensis_palliatus
ENSHGLG00000007909	-	100	87.415	ENSCGRG00001000229	-	99	89.389	Cricetulus_griseus_chok1gshd
ENSHGLG00000007909	-	99	83.469	ENSCGRG00001002732	-	99	83.469	Cricetulus_griseus_chok1gshd
ENSHGLG00000007909	-	100	96.681	ENSCGRG00001022693	-	100	96.681	Cricetulus_griseus_chok1gshd
ENSHGLG00000007909	-	98	80.854	ENSCGRG00000001888	-	96	80.441	Cricetulus_griseus_crigri
ENSHGLG00000007909	-	100	83.711	ENSCGRG00000000257	-	100	83.711	Cricetulus_griseus_crigri
ENSHGLG00000007909	-	99	96.667	ENSCGRG00000003664	-	100	96.667	Cricetulus_griseus_crigri
ENSHGLG00000007909	-	70	53.734	ENSCSEG00000001841	-	71	53.958	Cynoglossus_semilaevis
ENSHGLG00000007909	-	100	71.829	ENSDARG00000009585	papola	100	71.350	Danio_rerio
ENSHGLG00000007909	-	65	89.407	ENSDORG00000013415	-	100	90.678	Dipodomys_ordii
ENSHGLG00000007909	-	99	83.582	ENSETEG00000004889	PAPOLA	100	83.582	Echinops_telfairi
ENSHGLG00000007909	-	100	68.700	ENSELUG00000018972	papola	100	68.708	Esox_lucius
ENSHGLG00000007909	-	100	97.691	ENSFCAG00000006784	PAPOLA	100	97.691	Felis_catus
ENSHGLG00000007909	-	99	93.750	ENSFALG00000002547	PAPOLA	98	87.763	Ficedula_albicollis
ENSHGLG00000007909	-	99	97.681	ENSFDAG00000010370	PAPOLA	100	97.681	Fukomys_damarensis
ENSHGLG00000007909	-	73	65.814	ENSGMOG00000010209	papola	100	66.479	Gadus_morhua
ENSHGLG00000007909	-	100	90.270	ENSGALG00000033099	PAPOLA	100	90.270	Gallus_gallus
ENSHGLG00000007909	-	69	54.375	ENSGACG00000006142	-	100	53.958	Gasterosteus_aculeatus
ENSHGLG00000007909	-	96	94.713	ENSGAGG00000020500	PAPOLA	99	94.713	Gopherus_agassizii
ENSHGLG00000007909	-	100	96.961	ENSGGOG00000006287	PAPOLA	100	96.961	Gorilla_gorilla
ENSHGLG00000007909	-	100	99.865	ENSHGLG00100017273	PAPOLA	100	99.865	Heterocephalus_glaber_male
ENSHGLG00000007909	-	100	68.020	ENSIPUG00000005919	papola	97	80.101	Ictalurus_punctatus
ENSHGLG00000007909	-	100	97.547	ENSSTOG00000011471	PAPOLA	100	97.547	Ictidomys_tridecemlineatus
ENSHGLG00000007909	-	99	96.667	ENSJJAG00000024340	Papola	100	96.667	Jaculus_jaculus
ENSHGLG00000007909	-	99	76.892	ENSLACG00000018136	PAPOLA	99	76.892	Latimeria_chalumnae
ENSHGLG00000007909	-	99	66.086	ENSLOCG00000008632	papola	99	66.220	Lepisosteus_oculatus
ENSHGLG00000007909	-	99	96.196	ENSLAFG00000000946	PAPOLA	99	96.196	Loxodonta_africana
ENSHGLG00000007909	-	100	96.823	ENSMFAG00000001792	PAPOLA	99	99.261	Macaca_fascicularis
ENSHGLG00000007909	-	100	96.779	ENSMMUG00000018610	PAPOLA	100	96.844	Macaca_mulatta
ENSHGLG00000007909	-	100	96.823	ENSMNEG00000043747	PAPOLA	99	98.162	Macaca_nemestrina
ENSHGLG00000007909	-	100	96.823	ENSMLEG00000032066	PAPOLA	100	96.823	Mandrillus_leucophaeus
ENSHGLG00000007909	-	84	89.550	ENSMGAG00000013228	-	100	89.550	Meleagris_gallopavo
ENSHGLG00000007909	-	100	97.114	ENSMAUG00000017178	Papola	100	97.114	Mesocricetus_auratus
ENSHGLG00000007909	-	100	97.493	ENSMICG00000010347	PAPOLA	100	97.493	Microcebus_murinus
ENSHGLG00000007909	-	100	97.114	ENSMOCG00000021670	Papola	100	97.114	Microtus_ochrogaster
ENSHGLG00000007909	-	99	81.389	ENSMODG00000001969	-	99	81.528	Monodelphis_domestica
ENSHGLG00000007909	-	100	95.399	ENSMODG00000012887	-	100	95.399	Monodelphis_domestica
ENSHGLG00000007909	-	100	95.815	MGP_CAROLIEiJ_G0018093	Papola	100	95.815	Mus_caroli
ENSHGLG00000007909	-	100	96.104	ENSMUSG00000021111	Papola	100	96.104	Mus_musculus
ENSHGLG00000007909	-	100	96.104	MGP_PahariEiJ_G0029850	Papola	100	96.104	Mus_pahari
ENSHGLG00000007909	-	100	96.248	MGP_SPRETEiJ_G0018943	Papola	100	96.248	Mus_spretus
ENSHGLG00000007909	-	100	97.023	ENSMPUG00000003054	PAPOLA	100	97.023	Mustela_putorius_furo
ENSHGLG00000007909	-	100	95.129	ENSMLUG00000010922	PAPOLA	100	95.129	Myotis_lucifugus
ENSHGLG00000007909	-	100	96.104	ENSNGAG00000022172	Papola	100	96.104	Nannospalax_galili
ENSHGLG00000007909	-	99	91.622	ENSNLEG00000000625	PAPOLA	100	91.622	Nomascus_leucogenys
ENSHGLG00000007909	-	67	86.364	ENSMEUG00000007831	-	74	85.827	Notamacropus_eugenii
ENSHGLG00000007909	-	97	91.262	ENSOPRG00000007625	PAPOLA	100	91.262	Ochotona_princeps
ENSHGLG00000007909	-	69	54.298	ENSONIG00000001062	-	97	54.298	Oreochromis_niloticus
ENSHGLG00000007909	-	99	96.093	ENSOANG00000013812	PAPOLA	99	96.093	Ornithorhynchus_anatinus
ENSHGLG00000007909	-	99	93.758	ENSOCUG00000011531	PAPOLA	99	93.758	Oryctolagus_cuniculus
ENSHGLG00000007909	-	100	96.892	ENSOGAG00000004611	PAPOLA	100	96.892	Otolemur_garnettii
ENSHGLG00000007909	-	100	96.482	ENSOARG00000016579	-	100	96.482	Ovis_aries
ENSHGLG00000007909	-	100	96.961	ENSPPAG00000030505	PAPOLA	100	96.961	Pan_paniscus
ENSHGLG00000007909	-	100	97.493	ENSPPRG00000008616	PAPOLA	100	97.493	Panthera_pardus
ENSHGLG00000007909	-	99	97.483	ENSPTIG00000018852	PAPOLA	99	97.483	Panthera_tigris_altaica
ENSHGLG00000007909	-	100	96.961	ENSPTRG00000006704	PAPOLA	100	96.961	Pan_troglodytes
ENSHGLG00000007909	-	100	96.823	ENSPANG00000025582	PAPOLA	98	99.255	Papio_anubis
ENSHGLG00000007909	-	96	74.773	ENSPKIG00000014471	papola	100	70.419	Paramormyrops_kingsleyae
ENSHGLG00000007909	-	100	92.838	ENSPSIG00000014157	PAPOLA	87	92.838	Pelodiscus_sinensis
ENSHGLG00000007909	-	100	96.970	ENSPEMG00000000043	Papola	100	96.970	Peromyscus_maniculatus_bairdii
ENSHGLG00000007909	-	100	95.000	ENSPCIG00000013234	PAPOLA	100	95.000	Phascolarctos_cinereus
ENSHGLG00000007909	-	100	94.497	ENSPPYG00000006128	PAPOLA	100	94.497	Pongo_abelii
ENSHGLG00000007909	-	89	89.939	ENSPCAG00000004199	PAPOLA	100	89.939	Procavia_capensis
ENSHGLG00000007909	-	99	94.413	ENSPCOG00000022117	PAPOLA	99	94.413	Propithecus_coquereli
ENSHGLG00000007909	-	100	95.940	ENSPVAG00000013925	PAPOLA	100	95.940	Pteropus_vampyrus
ENSHGLG00000007909	-	100	71.791	ENSPNAG00000010467	papola	100	71.955	Pygocentrus_nattereri
ENSHGLG00000007909	-	100	94.452	ENSRNOG00000004827	Papola	100	94.452	Rattus_norvegicus
ENSHGLG00000007909	-	99	96.126	ENSRBIG00000038490	PAPOLA	100	96.126	Rhinopithecus_bieti
ENSHGLG00000007909	-	100	96.823	ENSRROG00000025545	PAPOLA	100	96.823	Rhinopithecus_roxellana
ENSHGLG00000007909	-	99	96.700	ENSSBOG00000024061	PAPOLA	99	97.778	Saimiri_boliviensis_boliviensis
ENSHGLG00000007909	-	99	95.380	ENSSHAG00000015211	PAPOLA	99	95.380	Sarcophilus_harrisii
ENSHGLG00000007909	-	100	70.999	ENSSFOG00015004431	papola	100	84.685	Scleropages_formosus
ENSHGLG00000007909	-	98	47.515	ENSSDUG00000018247	-	97	46.352	Seriola_dumerili
ENSHGLG00000007909	-	100	92.297	ENSSPUG00000005835	PAPOLA	100	92.297	Sphenodon_punctatus
ENSHGLG00000007909	-	100	97.403	ENSSSCG00000002505	-	100	97.403	Sus_scrofa
ENSHGLG00000007909	-	99	90.638	ENSTGUG00000012687	PAPOLA	99	90.638	Taeniopygia_guttata
ENSHGLG00000007909	-	75	88.043	ENSTBEG00000000194	PAPOLA	75	88.043	Tupaia_belangeri
ENSHGLG00000007909	-	79	96.875	ENSTTRG00000005717	PAPOLA	80	94.805	Tursiops_truncatus
ENSHGLG00000007909	-	61	98.578	ENSUAMG00000025737	PAPOLA	98	98.578	Ursus_americanus
ENSHGLG00000007909	-	99	96.467	ENSVPAG00000006464	PAPOLA	100	96.467	Vicugna_pacos
ENSHGLG00000007909	-	100	97.403	ENSVVUG00000028340	PAPOLA	100	97.403	Vulpes_vulpes
ENSHGLG00000007909	-	100	82.880	ENSXETG00000013949	papola	100	82.880	Xenopus_tropicalis