EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000007979 (Gene tree)
Gene ID: -
Gene Symbol: TSEN54
Alias: SEN54|SEN54L
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 8576 bases
Position: chrJH602114.1:5320556-5329131
Accession: 101718062
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000011121	tRNA_int_end_N2	PF12928.7	6.5e-18	1	1
ENSHGLP00000011120	tRNA_int_end_N2	PF12928.7	7.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000011245	-	1461	-	ENSHGLP00000011121	486 (aa)	-	-
ENSHGLT00000011244	-	2475	XM_004860667	ENSHGLP00000011120	525 (aa)	XP_004860727	A0A0P6J532

Gene Model

Click here to download ENSHGLG00000007979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000007979's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000007979	TSEN54	100	86.122	ENSG00000182173	TSEN54	100	94.444	Homo_sapiens
ENSHGLG00000007979	TSEN54	97	47.276	ENSAPOG00000009659	tsen54	99	44.522	Acanthochromis_polyacanthus
ENSHGLG00000007979	TSEN54	99	80.755	ENSAMEG00000009414	TSEN54	99	81.321	Ailuropoda_melanoleuca
ENSHGLG00000007979	TSEN54	97	47.082	ENSAOCG00000000152	tsen54	95	47.082	Amphiprion_ocellaris
ENSHGLG00000007979	TSEN54	97	46.498	ENSAPEG00000018931	tsen54	94	46.498	Amphiprion_percula
ENSHGLG00000007979	TSEN54	97	44.123	ENSATEG00000019860	tsen54	97	44.656	Anabas_testudineus
ENSHGLG00000007979	TSEN54	86	50.753	ENSAPLG00000009419	TSEN54	100	50.753	Anas_platyrhynchos
ENSHGLG00000007979	TSEN54	99	52.632	ENSACAG00000006714	TSEN54	99	52.632	Anolis_carolinensis
ENSHGLG00000007979	TSEN54	99	86.705	ENSANAG00000024061	TSEN54	99	86.857	Aotus_nancymaae
ENSHGLG00000007979	TSEN54	97	45.731	ENSACLG00000019800	tsen54	96	46.272	Astatotilapia_calliptera
ENSHGLG00000007979	TSEN54	97	47.969	ENSAMXG00000006546	tsen54	96	47.969	Astyanax_mexicanus
ENSHGLG00000007979	TSEN54	100	82.642	ENSBTAG00000000824	TSEN54	100	83.239	Bos_taurus
ENSHGLG00000007979	TSEN54	99	85.549	ENSCJAG00000014278	TSEN54	99	85.714	Callithrix_jacchus
ENSHGLG00000007979	TSEN54	100	83.992	ENSCAFG00000004798	TSEN54	100	84.181	Canis_familiaris
ENSHGLG00000007979	TSEN54	100	83.992	ENSCAFG00020000312	TSEN54	100	84.181	Canis_lupus_dingo
ENSHGLG00000007979	TSEN54	100	83.048	ENSCHIG00000019908	TSEN54	100	83.048	Capra_hircus
ENSHGLG00000007979	TSEN54	86	81.758	ENSTSYG00000037439	TSEN54	100	82.198	Carlito_syrichta
ENSHGLG00000007979	TSEN54	99	86.127	ENSCCAG00000036624	TSEN54	99	86.095	Cebus_capucinus
ENSHGLG00000007979	TSEN54	97	86.328	ENSCATG00000042877	TSEN54	99	86.476	Cercocebus_atys
ENSHGLG00000007979	TSEN54	97	89.237	ENSCLAG00000002924	TSEN54	99	89.504	Chinchilla_lanigera
ENSHGLG00000007979	TSEN54	100	85.932	ENSCSAG00000004809	TSEN54	100	86.122	Chlorocebus_sabaeus
ENSHGLG00000007979	TSEN54	99	55.660	ENSCPBG00000028071	TSEN54	99	55.660	Chrysemys_picta_bellii
ENSHGLG00000007979	TSEN54	100	85.361	ENSCANG00000028053	TSEN54	100	85.361	Colobus_angolensis_palliatus
ENSHGLG00000007979	TSEN54	100	83.429	ENSCGRG00001020029	Tsen54	100	83.429	Cricetulus_griseus_chok1gshd
ENSHGLG00000007979	TSEN54	84	82.127	ENSCGRG00000016289	Tsen54	100	82.127	Cricetulus_griseus_crigri
ENSHGLG00000007979	TSEN54	80	38.915	ENSCSEG00000020586	tsen54	99	38.915	Cynoglossus_semilaevis
ENSHGLG00000007979	TSEN54	80	45.498	ENSDARG00000036844	tsen54	99	45.498	Danio_rerio
ENSHGLG00000007979	TSEN54	100	78.719	ENSDNOG00000018452	TSEN54	100	79.849	Dasypus_novemcinctus
ENSHGLG00000007979	TSEN54	100	84.190	ENSDORG00000004073	Tsen54	100	84.190	Dipodomys_ordii
ENSHGLG00000007979	TSEN54	97	36.590	ENSEBUG00000005203	TSEN54	95	36.590	Eptatretus_burgeri
ENSHGLG00000007979	TSEN54	100	84.340	ENSEASG00005000579	TSEN54	100	84.340	Equus_asinus_asinus
ENSHGLG00000007979	TSEN54	100	84.151	ENSECAG00000004924	TSEN54	100	84.151	Equus_caballus
ENSHGLG00000007979	TSEN54	86	78.556	ENSEEUG00000008467	TSEN54	100	78.993	Erinaceus_europaeus
ENSHGLG00000007979	TSEN54	96	44.693	ENSELUG00000017703	tsen54	90	44.693	Esox_lucius
ENSHGLG00000007979	TSEN54	99	84.091	ENSFCAG00000023712	TSEN54	99	84.470	Felis_catus
ENSHGLG00000007979	TSEN54	94	52.419	ENSFALG00000001119	TSEN54	99	50.758	Ficedula_albicollis
ENSHGLG00000007979	TSEN54	86	91.796	ENSFDAG00000019090	TSEN54	99	91.796	Fukomys_damarensis
ENSHGLG00000007979	TSEN54	97	48.837	ENSFHEG00000005470	tsen54	96	49.031	Fundulus_heteroclitus
ENSHGLG00000007979	TSEN54	81	45.503	ENSGMOG00000013146	tsen54	99	45.503	Gadus_morhua
ENSHGLG00000007979	TSEN54	95	48.932	ENSGALG00000047163	TSEN54	98	48.932	Gallus_gallus
ENSHGLG00000007979	TSEN54	99	47.378	ENSGAFG00000005111	tsen54	99	47.753	Gambusia_affinis
ENSHGLG00000007979	TSEN54	96	45.594	ENSGACG00000014987	tsen54	99	45.594	Gasterosteus_aculeatus
ENSHGLG00000007979	TSEN54	100	57.037	ENSGAGG00000006825	TSEN54	99	57.037	Gopherus_agassizii
ENSHGLG00000007979	TSEN54	97	85.827	ENSGGOG00000009417	TSEN54	100	86.024	Gorilla_gorilla
ENSHGLG00000007979	TSEN54	87	44.374	ENSHBUG00000018296	tsen54	99	37.727	Haplochromis_burtoni
ENSHGLG00000007979	TSEN54	100	99.048	ENSHGLG00100005497	TSEN54	100	99.048	Heterocephalus_glaber_male
ENSHGLG00000007979	TSEN54	80	41.705	ENSHCOG00000007481	tsen54	99	41.705	Hippocampus_comes
ENSHGLG00000007979	TSEN54	99	42.614	ENSIPUG00000000590	tsen54	99	42.614	Ictalurus_punctatus
ENSHGLG00000007979	TSEN54	100	82.286	ENSSTOG00000012883	TSEN54	100	82.286	Ictidomys_tridecemlineatus
ENSHGLG00000007979	TSEN54	100	84.250	ENSJJAG00000007365	Tsen54	100	84.250	Jaculus_jaculus
ENSHGLG00000007979	TSEN54	97	46.881	ENSKMAG00000006944	tsen54	97	46.881	Kryptolebias_marmoratus
ENSHGLG00000007979	TSEN54	97	44.444	ENSLBEG00000004199	tsen54	97	44.636	Labrus_bergylta
ENSHGLG00000007979	TSEN54	97	47.601	ENSLACG00000009497	TSEN54	100	47.601	Latimeria_chalumnae
ENSHGLG00000007979	TSEN54	97	48.295	ENSLOCG00000011191	tsen54	97	48.689	Lepisosteus_oculatus
ENSHGLG00000007979	TSEN54	100	76.648	ENSLAFG00000011655	TSEN54	100	76.648	Loxodonta_africana
ENSHGLG00000007979	TSEN54	100	85.932	ENSMFAG00000000712	TSEN54	100	86.122	Macaca_fascicularis
ENSHGLG00000007979	TSEN54	100	85.741	ENSMNEG00000029199	TSEN54	100	85.932	Macaca_nemestrina
ENSHGLG00000007979	TSEN54	86	85.177	ENSMLEG00000044168	TSEN54	88	85.398	Mandrillus_leucophaeus
ENSHGLG00000007979	TSEN54	97	43.536	ENSMAMG00000019773	tsen54	97	44.106	Mastacembelus_armatus
ENSHGLG00000007979	TSEN54	97	45.731	ENSMZEG00005000884	tsen54	96	46.272	Maylandia_zebra
ENSHGLG00000007979	TSEN54	99	48.237	ENSMGAG00000009556	TSEN54	99	48.237	Meleagris_gallopavo
ENSHGLG00000007979	TSEN54	100	83.238	ENSMAUG00000016838	Tsen54	100	83.238	Mesocricetus_auratus
ENSHGLG00000007979	TSEN54	100	81.939	ENSMICG00000044012	TSEN54	100	82.700	Microcebus_murinus
ENSHGLG00000007979	TSEN54	100	84.190	ENSMOCG00000021585	Tsen54	100	84.190	Microtus_ochrogaster
ENSHGLG00000007979	TSEN54	73	65.359	ENSMMOG00000020189	tsen54	85	65.359	Mola_mola
ENSHGLG00000007979	TSEN54	98	67.481	ENSMODG00000007438	TSEN54	98	67.593	Monodelphis_domestica
ENSHGLG00000007979	TSEN54	97	45.558	ENSMALG00000020573	tsen54	97	45.558	Monopterus_albus
ENSHGLG00000007979	TSEN54	100	81.714	MGP_CAROLIEiJ_G0017417	Tsen54	100	81.714	Mus_caroli
ENSHGLG00000007979	TSEN54	100	81.905	ENSMUSG00000020781	Tsen54	100	81.905	Mus_musculus
ENSHGLG00000007979	TSEN54	100	81.524	MGP_PahariEiJ_G0018547	Tsen54	100	81.524	Mus_pahari
ENSHGLG00000007979	TSEN54	100	81.714	MGP_SPRETEiJ_G0018262	Tsen54	100	81.714	Mus_spretus
ENSHGLG00000007979	TSEN54	100	82.486	ENSMPUG00000013870	TSEN54	100	82.674	Mustela_putorius_furo
ENSHGLG00000007979	TSEN54	100	78.719	ENSMLUG00000015298	TSEN54	100	79.096	Myotis_lucifugus
ENSHGLG00000007979	TSEN54	100	82.476	ENSNGAG00000015673	Tsen54	100	82.476	Nannospalax_galili
ENSHGLG00000007979	TSEN54	89	64.668	ENSMEUG00000011908	TSEN54	100	64.668	Notamacropus_eugenii
ENSHGLG00000007979	TSEN54	100	75.522	ENSOPRG00000012513	TSEN54	100	75.522	Ochotona_princeps
ENSHGLG00000007979	TSEN54	97	46.628	ENSONIG00000009543	tsen54	96	46.628	Oreochromis_niloticus
ENSHGLG00000007979	TSEN54	99	74.859	ENSOCUG00000009875	TSEN54	99	75.985	Oryctolagus_cuniculus
ENSHGLG00000007979	TSEN54	97	45.977	ENSORLG00000000852	tsen54	97	45.977	Oryzias_latipes
ENSHGLG00000007979	TSEN54	97	46.471	ENSORLG00020018221	tsen54	97	46.214	Oryzias_latipes_hni
ENSHGLG00000007979	TSEN54	97	46.471	ENSORLG00015009413	tsen54	98	46.214	Oryzias_latipes_hsok
ENSHGLG00000007979	TSEN54	97	45.988	ENSOMEG00000014402	tsen54	94	45.988	Oryzias_melastigma
ENSHGLG00000007979	TSEN54	100	78.517	ENSOGAG00000001442	TSEN54	100	78.517	Otolemur_garnettii
ENSHGLG00000007979	TSEN54	86	79.825	ENSOARG00000010361	TSEN54	100	80.525	Ovis_aries
ENSHGLG00000007979	TSEN54	94	85.081	ENSPPAG00000043519	TSEN54	100	85.081	Pan_paniscus
ENSHGLG00000007979	TSEN54	99	84.091	ENSPPRG00000009162	TSEN54	99	84.470	Panthera_pardus
ENSHGLG00000007979	TSEN54	86	84.071	ENSPTIG00000019312	TSEN54	96	84.071	Panthera_tigris_altaica
ENSHGLG00000007979	TSEN54	100	85.932	ENSPTRG00000009646	TSEN54	100	86.122	Pan_troglodytes
ENSHGLG00000007979	TSEN54	99	85.905	ENSPANG00000020133	TSEN54	99	86.095	Papio_anubis
ENSHGLG00000007979	TSEN54	97	45.719	ENSPKIG00000023018	tsen54	100	45.287	Paramormyrops_kingsleyae
ENSHGLG00000007979	TSEN54	80	52.326	ENSPSIG00000012807	TSEN54	99	52.326	Pelodiscus_sinensis
ENSHGLG00000007979	TSEN54	92	37.067	ENSPMGG00000019578	tsen54	99	37.067	Periophthalmus_magnuspinnatus
ENSHGLG00000007979	TSEN54	100	84.190	ENSPEMG00000014857	Tsen54	100	84.190	Peromyscus_maniculatus_bairdii
ENSHGLG00000007979	TSEN54	99	47.398	ENSPFOG00000022740	tsen54	99	47.770	Poecilia_formosa
ENSHGLG00000007979	TSEN54	99	47.103	ENSPLAG00000014847	tsen54	99	47.477	Poecilia_latipinna
ENSHGLG00000007979	TSEN54	99	46.916	ENSPMEG00000022876	tsen54	99	47.290	Poecilia_mexicana
ENSHGLG00000007979	TSEN54	99	46.717	ENSPREG00000013090	tsen54	99	47.092	Poecilia_reticulata
ENSHGLG00000007979	TSEN54	91	78.870	ENSPPYG00000008629	TSEN54	100	79.079	Pongo_abelii
ENSHGLG00000007979	TSEN54	95	69.565	ENSPCAG00000002093	TSEN54	99	69.565	Procavia_capensis
ENSHGLG00000007979	TSEN54	99	84.512	ENSPCOG00000027880	TSEN54	99	85.277	Propithecus_coquereli
ENSHGLG00000007979	TSEN54	100	83.239	ENSPVAG00000008446	TSEN54	100	83.239	Pteropus_vampyrus
ENSHGLG00000007979	TSEN54	92	45.618	ENSPNYG00000010217	tsen54	99	46.123	Pundamilia_nyererei
ENSHGLG00000007979	TSEN54	97	45.333	ENSPNAG00000003770	tsen54	96	45.507	Pygocentrus_nattereri
ENSHGLG00000007979	TSEN54	100	81.714	ENSRNOG00000004598	Tsen54	100	81.714	Rattus_norvegicus
ENSHGLG00000007979	TSEN54	100	85.932	ENSRBIG00000043040	TSEN54	100	85.932	Rhinopithecus_bieti
ENSHGLG00000007979	TSEN54	100	85.741	ENSRROG00000030797	TSEN54	100	85.741	Rhinopithecus_roxellana
ENSHGLG00000007979	TSEN54	99	82.667	ENSSBOG00000013543	TSEN54	99	82.857	Saimiri_boliviensis_boliviensis
ENSHGLG00000007979	TSEN54	99	64.552	ENSSHAG00000018127	TSEN54	98	64.552	Sarcophilus_harrisii
ENSHGLG00000007979	TSEN54	81	45.199	ENSSFOG00015004093	tsen54	100	45.199	Scleropages_formosus
ENSHGLG00000007979	TSEN54	96	41.366	ENSSMAG00000012449	tsen54	97	44.382	Scophthalmus_maximus
ENSHGLG00000007979	TSEN54	97	45.865	ENSSDUG00000021506	tsen54	97	45.865	Seriola_dumerili
ENSHGLG00000007979	TSEN54	97	45.677	ENSSLDG00000016303	tsen54	97	45.677	Seriola_lalandi_dorsalis
ENSHGLG00000007979	TSEN54	86	53.286	ENSSPUG00000008988	TSEN54	100	52.596	Sphenodon_punctatus
ENSHGLG00000007979	TSEN54	80	42.790	ENSSPAG00000008047	tsen54	99	42.790	Stegastes_partitus
ENSHGLG00000007979	TSEN54	92	46.341	ENSSPAG00000008098	-	99	46.341	Stegastes_partitus
ENSHGLG00000007979	TSEN54	100	84.181	ENSSSCG00000036852	TSEN54	100	84.934	Sus_scrofa
ENSHGLG00000007979	TSEN54	86	52.434	ENSTGUG00000008548	TSEN54	100	52.434	Taeniopygia_guttata
ENSHGLG00000007979	TSEN54	97	45.841	ENSTRUG00000004230	tsen54	96	46.035	Takifugu_rubripes
ENSHGLG00000007979	TSEN54	77	64.286	ENSTNIG00000011281	tsen54	97	46.838	Tetraodon_nigroviridis
ENSHGLG00000007979	TSEN54	86	83.406	ENSTTRG00000015828	TSEN54	100	84.061	Tursiops_truncatus
ENSHGLG00000007979	TSEN54	81	80.930	ENSUAMG00000010045	TSEN54	100	80.930	Ursus_americanus
ENSHGLG00000007979	TSEN54	83	81.306	ENSUMAG00000008979	TSEN54	100	80.930	Ursus_maritimus
ENSHGLG00000007979	TSEN54	98	82.852	ENSVVUG00000011411	TSEN54	98	83.495	Vulpes_vulpes
ENSHGLG00000007979	TSEN54	99	49.341	ENSXETG00000012532	tsen54	99	70.833	Xenopus_tropicalis
ENSHGLG00000007979	TSEN54	97	43.811	ENSXCOG00000018245	tsen54	99	44.204	Xiphophorus_couchianus
ENSHGLG00000007979	TSEN54	97	47.399	ENSXMAG00000018818	tsen54	96	47.784	Xiphophorus_maculatus