EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000008020 (Gene tree)
Gene ID: -
Gene Symbol: GFI1
Alias: GFI-1|GFI1A|ZNF163
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 9159 bases
Position: chrJH602055.1:5261537-5270695
Accession: 101715410
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000011175	zf-C2H2	PF00096.26	3e-28	1	6
ENSHGLP00000011175	zf-C2H2	PF00096.26	3e-28	2	6
ENSHGLP00000011175	zf-C2H2	PF00096.26	3e-28	3	6
ENSHGLP00000011175	zf-C2H2	PF00096.26	3e-28	4	6
ENSHGLP00000011175	zf-C2H2	PF00096.26	3e-28	5	6
ENSHGLP00000011175	zf-C2H2	PF00096.26	3e-28	6	6
ENSHGLP00000011176	zf-C2H2	PF00096.26	7.7e-28	1	6
ENSHGLP00000011176	zf-C2H2	PF00096.26	7.7e-28	2	6
ENSHGLP00000011176	zf-C2H2	PF00096.26	7.7e-28	3	6
ENSHGLP00000011176	zf-C2H2	PF00096.26	7.7e-28	4	6
ENSHGLP00000011176	zf-C2H2	PF00096.26	7.7e-28	5	6
ENSHGLP00000011176	zf-C2H2	PF00096.26	7.7e-28	6	6
ENSHGLP00000011175	zf-met	PF12874.7	1.5e-07	1	1
ENSHGLP00000011176	zf-met	PF12874.7	2.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000011300	GFI1-201	1441	XM_004841269	ENSHGLP00000011175	420 (aa)	XP_004841326	G5AZW8
ENSHGLT00000011301	GFI1-202	1434	-	ENSHGLP00000011176	477 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000008020's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000008020's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000008020	GFI1	54	44.379	ENSHGLG00000014546	-	82	44.379
ENSHGLG00000008020	GFI1	54	45.029	ENSHGLG00000009291	-	70	45.029
ENSHGLG00000008020	GFI1	64	43.195	ENSHGLG00000005975	-	79	43.407
ENSHGLG00000008020	GFI1	51	45.399	ENSHGLG00000008584	ZNF667	83	45.399
ENSHGLG00000008020	GFI1	55	44.643	ENSHGLG00000019054	-	90	45.578
ENSHGLG00000008020	GFI1	57	40.000	ENSHGLG00000007674	ZNF423	55	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000008020	GFI1	100	90.521	ENSG00000162676	GFI1	100	91.469	Homo_sapiens
ENSHGLG00000008020	GFI1	100	63.170	ENSAPOG00000015189	gfi1ab	100	63.593	Acanthochromis_polyacanthus
ENSHGLG00000008020	GFI1	100	64.387	ENSACIG00000016354	gfi1ab	100	64.692	Amphilophus_citrinellus
ENSHGLG00000008020	GFI1	100	55.035	ENSAOCG00000008339	gfi1ab	100	53.428	Amphiprion_ocellaris
ENSHGLG00000008020	GFI1	100	63.869	ENSAPEG00000023870	gfi1ab	100	64.066	Amphiprion_percula
ENSHGLG00000008020	GFI1	100	61.792	ENSATEG00000009167	gfi1ab	90	61.033	Anabas_testudineus
ENSHGLG00000008020	GFI1	87	74.054	ENSAPLG00000015700	GFI1	99	74.054	Anas_platyrhynchos
ENSHGLG00000008020	GFI1	100	70.766	ENSACAG00000004498	GFI1	100	71.230	Anolis_carolinensis
ENSHGLG00000008020	GFI1	100	90.284	ENSANAG00000019656	GFI1	100	90.284	Aotus_nancymaae
ENSHGLG00000008020	GFI1	100	63.765	ENSACLG00000026458	gfi1ab	93	63.529	Astatotilapia_calliptera
ENSHGLG00000008020	GFI1	61	48.889	ENSAMXG00000015228	-	56	62.360	Astyanax_mexicanus
ENSHGLG00000008020	GFI1	100	60.941	ENSAMXG00000039600	gfi1ab	100	60.706	Astyanax_mexicanus
ENSHGLG00000008020	GFI1	100	90.499	ENSBTAG00000016723	GFI1	100	90.499	Bos_taurus
ENSHGLG00000008020	GFI1	100	89.100	ENSCJAG00000017609	GFI1	100	89.810	Callithrix_jacchus
ENSHGLG00000008020	GFI1	100	89.573	ENSCAFG00000020155	GFI1	100	89.573	Canis_familiaris
ENSHGLG00000008020	GFI1	100	89.573	ENSCAFG00020013371	GFI1	92	86.099	Canis_lupus_dingo
ENSHGLG00000008020	GFI1	100	89.549	ENSCHIG00000016135	GFI1	100	90.261	Capra_hircus
ENSHGLG00000008020	GFI1	100	94.762	ENSCPOG00000011727	GFI1	100	94.762	Cavia_porcellus
ENSHGLG00000008020	GFI1	100	89.810	ENSCCAG00000036072	GFI1	100	90.995	Cebus_capucinus
ENSHGLG00000008020	GFI1	100	90.047	ENSCATG00000037873	GFI1	100	90.995	Cercocebus_atys
ENSHGLG00000008020	GFI1	100	88.571	ENSCLAG00000005915	GFI1	100	88.222	Chinchilla_lanigera
ENSHGLG00000008020	GFI1	86	89.560	ENSCSAG00000001469	GFI1	100	89.286	Chlorocebus_sabaeus
ENSHGLG00000008020	GFI1	100	89.810	ENSCANG00000034077	GFI1	100	90.758	Colobus_angolensis_palliatus
ENSHGLG00000008020	GFI1	100	87.204	ENSCGRG00001015432	Gfi1	100	87.204	Cricetulus_griseus_chok1gshd
ENSHGLG00000008020	GFI1	100	58.685	ENSCSEG00000017729	GFI1	100	58.451	Cynoglossus_semilaevis
ENSHGLG00000008020	GFI1	100	62.441	ENSCVAG00000011828	gfi1ab	100	62.207	Cyprinodon_variegatus
ENSHGLG00000008020	GFI1	100	60.329	ENSCVAG00000004930	GFI1	100	61.268	Cyprinodon_variegatus
ENSHGLG00000008020	GFI1	100	64.319	ENSDARG00000044457	gfi1ab	100	64.336	Danio_rerio
ENSHGLG00000008020	GFI1	100	89.362	ENSDNOG00000000782	GFI1	97	90.307	Dasypus_novemcinctus
ENSHGLG00000008020	GFI1	100	89.336	ENSEASG00005015509	GFI1	94	85.313	Equus_asinus_asinus
ENSHGLG00000008020	GFI1	92	83.505	ENSECAG00000006647	GFI1	92	83.763	Equus_caballus
ENSHGLG00000008020	GFI1	100	84.286	ENSEEUG00000000198	GFI1	100	84.524	Erinaceus_europaeus
ENSHGLG00000008020	GFI1	100	58.726	ENSELUG00000019033	GFI1	100	58.726	Esox_lucius
ENSHGLG00000008020	GFI1	100	64.286	ENSELUG00000003015	gfi1ab	99	64.055	Esox_lucius
ENSHGLG00000008020	GFI1	100	90.047	ENSFCAG00000005914	GFI1	100	89.810	Felis_catus
ENSHGLG00000008020	GFI1	100	59.122	ENSFHEG00000000341	GFI1	100	60.185	Fundulus_heteroclitus
ENSHGLG00000008020	GFI1	100	63.551	ENSFHEG00000010997	gfi1ab	100	63.466	Fundulus_heteroclitus
ENSHGLG00000008020	GFI1	100	62.911	ENSGMOG00000007737	gfi1ab	100	62.972	Gadus_morhua
ENSHGLG00000008020	GFI1	100	72.727	ENSGALG00000043650	GFI1	100	72.727	Gallus_gallus
ENSHGLG00000008020	GFI1	100	63.357	ENSGAFG00000016637	gfi1ab	100	62.850	Gambusia_affinis
ENSHGLG00000008020	GFI1	100	58.933	ENSGAFG00000018063	GFI1	100	61.201	Gambusia_affinis
ENSHGLG00000008020	GFI1	100	63.658	ENSGACG00000004257	gfi1ab	99	61.916	Gasterosteus_aculeatus
ENSHGLG00000008020	GFI1	100	90.521	ENSGGOG00000005320	GFI1	100	91.469	Gorilla_gorilla
ENSHGLG00000008020	GFI1	100	64.066	ENSHBUG00000011969	gfi1ab	100	63.658	Haplochromis_burtoni
ENSHGLG00000008020	GFI1	100	100.000	ENSHGLG00100000610	GFI1	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000008020	GFI1	100	54.036	ENSHCOG00000008590	gfi1ab	100	51.562	Hippocampus_comes
ENSHGLG00000008020	GFI1	100	57.907	ENSHCOG00000019555	GFI1	100	57.981	Hippocampus_comes
ENSHGLG00000008020	GFI1	100	61.611	ENSIPUG00000010071	gfi1ab	87	61.449	Ictalurus_punctatus
ENSHGLG00000008020	GFI1	100	57.783	ENSIPUG00000013414	GFI1	100	58.019	Ictalurus_punctatus
ENSHGLG00000008020	GFI1	100	88.863	ENSSTOG00000014583	GFI1	100	90.284	Ictidomys_tridecemlineatus
ENSHGLG00000008020	GFI1	100	63.529	ENSKMAG00000003810	gfi1ab	100	63.059	Kryptolebias_marmoratus
ENSHGLG00000008020	GFI1	100	62.704	ENSLBEG00000027776	gfi1ab	100	62.471	Labrus_bergylta
ENSHGLG00000008020	GFI1	99	77.222	ENSLACG00000017590	-	99	77.222	Latimeria_chalumnae
ENSHGLG00000008020	GFI1	100	69.484	ENSLACG00000013362	GFI1	98	68.545	Latimeria_chalumnae
ENSHGLG00000008020	GFI1	100	67.133	ENSLOCG00000004711	gfi1ab	100	66.667	Lepisosteus_oculatus
ENSHGLG00000008020	GFI1	100	83.848	ENSLAFG00000018346	GFI1	100	83.452	Loxodonta_africana
ENSHGLG00000008020	GFI1	100	90.047	ENSMFAG00000045801	GFI1	100	90.995	Macaca_fascicularis
ENSHGLG00000008020	GFI1	100	90.047	ENSMNEG00000036338	GFI1	100	90.995	Macaca_nemestrina
ENSHGLG00000008020	GFI1	100	90.047	ENSMLEG00000036181	GFI1	100	90.995	Mandrillus_leucophaeus
ENSHGLG00000008020	GFI1	100	63.934	ENSMAMG00000008125	gfi1ab	100	63.765	Mastacembelus_armatus
ENSHGLG00000008020	GFI1	100	64.000	ENSMZEG00005009895	gfi1ab	100	63.765	Maylandia_zebra
ENSHGLG00000008020	GFI1	87	74.797	ENSMGAG00000008187	GFI1	99	74.797	Meleagris_gallopavo
ENSHGLG00000008020	GFI1	100	90.995	ENSMICG00000047208	GFI1	100	90.995	Microcebus_murinus
ENSHGLG00000008020	GFI1	100	60.563	ENSMMOG00000005556	gfi1ab	100	60.563	Mola_mola
ENSHGLG00000008020	GFI1	100	78.391	ENSMODG00000011802	GFI1	100	79.080	Monodelphis_domestica
ENSHGLG00000008020	GFI1	100	63.915	ENSMALG00000014672	gfi1ab	100	63.246	Monopterus_albus
ENSHGLG00000008020	GFI1	100	89.125	MGP_CAROLIEiJ_G0027508	Gfi1	100	100.000	Mus_caroli
ENSHGLG00000008020	GFI1	100	88.889	ENSMUSG00000029275	Gfi1	100	88.889	Mus_musculus
ENSHGLG00000008020	GFI1	100	88.416	MGP_PahariEiJ_G0017280	Gfi1	100	100.000	Mus_pahari
ENSHGLG00000008020	GFI1	100	88.416	MGP_SPRETEiJ_G0028507	Gfi1	100	88.416	Mus_spretus
ENSHGLG00000008020	GFI1	100	81.235	ENSMPUG00000004178	GFI1	97	81.235	Mustela_putorius_furo
ENSHGLG00000008020	GFI1	100	86.998	ENSMLUG00000015191	GFI1	97	86.525	Myotis_lucifugus
ENSHGLG00000008020	GFI1	100	62.877	ENSNBRG00000015774	gfi1ab	100	61.253	Neolamprologus_brichardi
ENSHGLG00000008020	GFI1	93	88.491	ENSNLEG00000010470	GFI1	97	89.514	Nomascus_leucogenys
ENSHGLG00000008020	GFI1	100	90.521	ENSOPRG00000001473	GFI1	100	90.995	Ochotona_princeps
ENSHGLG00000008020	GFI1	100	63.765	ENSONIG00000019246	gfi1ab	100	63.529	Oreochromis_niloticus
ENSHGLG00000008020	GFI1	86	86.612	ENSOCUG00000023553	GFI1	93	87.432	Oryctolagus_cuniculus
ENSHGLG00000008020	GFI1	100	60.185	ENSORLG00000005060	GFI1	100	60.185	Oryzias_latipes
ENSHGLG00000008020	GFI1	100	62.118	ENSORLG00000013806	gfi1ab	100	61.647	Oryzias_latipes
ENSHGLG00000008020	GFI1	100	54.481	ENSORLG00020002817	GFI1	90	63.190	Oryzias_latipes_hni
ENSHGLG00000008020	GFI1	100	63.121	ENSORLG00020001602	gfi1ab	100	62.648	Oryzias_latipes_hni
ENSHGLG00000008020	GFI1	100	60.890	ENSORLG00015006070	GFI1	100	60.890	Oryzias_latipes_hsok
ENSHGLG00000008020	GFI1	100	58.974	ENSOMEG00000016722	GFI1	100	59.207	Oryzias_melastigma
ENSHGLG00000008020	GFI1	100	75.952	ENSOGAG00000027913	GFI1	100	66.905	Otolemur_garnettii
ENSHGLG00000008020	GFI1	69	97.143	ENSOARG00000016329	GFI1	95	97.143	Ovis_aries
ENSHGLG00000008020	GFI1	100	78.169	ENSPPAG00000042186	GFI1	100	77.465	Pan_paniscus
ENSHGLG00000008020	GFI1	100	90.047	ENSPPRG00000007521	GFI1	100	89.810	Panthera_pardus
ENSHGLG00000008020	GFI1	100	90.521	ENSPTRG00000043053	GFI1	100	91.469	Pan_troglodytes
ENSHGLG00000008020	GFI1	100	90.047	ENSPANG00000016433	GFI1	100	90.995	Papio_anubis
ENSHGLG00000008020	GFI1	100	65.509	ENSPKIG00000004263	GFI1	100	64.120	Paramormyrops_kingsleyae
ENSHGLG00000008020	GFI1	88	73.925	ENSPSIG00000008734	GFI1	97	73.925	Pelodiscus_sinensis
ENSHGLG00000008020	GFI1	100	59.716	ENSPMGG00000012546	gfi1ab	100	60.190	Periophthalmus_magnuspinnatus
ENSHGLG00000008020	GFI1	100	79.907	ENSPCIG00000013728	GFI1	100	80.841	Phascolarctos_cinereus
ENSHGLG00000008020	GFI1	100	63.121	ENSPFOG00000023214	gfi1ab	100	62.617	Poecilia_formosa
ENSHGLG00000008020	GFI1	100	61.663	ENSPLAG00000005376	GFI1	95	60.762	Poecilia_latipinna
ENSHGLG00000008020	GFI1	100	63.121	ENSPLAG00000010879	gfi1ab	100	62.617	Poecilia_latipinna
ENSHGLG00000008020	GFI1	100	63.830	ENSPMEG00000013694	gfi1ab	100	63.121	Poecilia_mexicana
ENSHGLG00000008020	GFI1	100	62.061	ENSPMEG00000019299	GFI1	100	62.529	Poecilia_mexicana
ENSHGLG00000008020	GFI1	100	54.545	ENSPREG00000007997	GFI1	100	54.608	Poecilia_reticulata
ENSHGLG00000008020	GFI1	100	63.121	ENSPREG00000014097	gfi1ab	100	62.617	Poecilia_reticulata
ENSHGLG00000008020	GFI1	100	76.706	ENSPCAG00000011020	GFI1	100	77.176	Procavia_capensis
ENSHGLG00000008020	GFI1	100	90.995	ENSPCOG00000020540	GFI1	100	90.995	Propithecus_coquereli
ENSHGLG00000008020	GFI1	100	86.461	ENSPVAG00000006928	GFI1	100	87.411	Pteropus_vampyrus
ENSHGLG00000008020	GFI1	100	63.765	ENSPNYG00000021183	gfi1ab	100	63.529	Pundamilia_nyererei
ENSHGLG00000008020	GFI1	100	56.132	ENSPNAG00000028014	GFI1	100	56.368	Pygocentrus_nattereri
ENSHGLG00000008020	GFI1	56	52.814	ENSPNAG00000014299	-	58	62.147	Pygocentrus_nattereri
ENSHGLG00000008020	GFI1	100	62.175	ENSPNAG00000027258	gfi1ab	100	61.702	Pygocentrus_nattereri
ENSHGLG00000008020	GFI1	100	88.416	ENSRNOG00000002042	Gfi1	100	88.416	Rattus_norvegicus
ENSHGLG00000008020	GFI1	100	90.047	ENSRBIG00000036467	GFI1	100	90.995	Rhinopithecus_bieti
ENSHGLG00000008020	GFI1	100	90.047	ENSRROG00000031687	GFI1	100	90.995	Rhinopithecus_roxellana
ENSHGLG00000008020	GFI1	100	89.100	ENSSBOG00000031300	GFI1	100	90.521	Saimiri_boliviensis_boliviensis
ENSHGLG00000008020	GFI1	100	67.290	ENSSFOG00015020295	gfi1	100	67.217	Scleropages_formosus
ENSHGLG00000008020	GFI1	100	64.169	ENSSMAG00000002782	gfi1ab	100	63.700	Scophthalmus_maximus
ENSHGLG00000008020	GFI1	100	63.183	ENSSDUG00000022410	gfi1ab	100	63.033	Seriola_dumerili
ENSHGLG00000008020	GFI1	100	62.945	ENSSLDG00000020163	gfi1ab	100	63.033	Seriola_lalandi_dorsalis
ENSHGLG00000008020	GFI1	81	80.645	ENSSPAG00000009140	gfi1ab	99	80.645	Stegastes_partitus
ENSHGLG00000008020	GFI1	100	90.476	ENSSSCG00000006902	GFI1	100	90.238	Sus_scrofa
ENSHGLG00000008020	GFI1	88	74.054	ENSTGUG00000006060	GFI1	100	74.054	Taeniopygia_guttata
ENSHGLG00000008020	GFI1	100	61.124	ENSTRUG00000000415	gfi1ab	100	60.890	Takifugu_rubripes
ENSHGLG00000008020	GFI1	100	61.321	ENSTNIG00000000651	gfi1ab	97	60.993	Tetraodon_nigroviridis
ENSHGLG00000008020	GFI1	100	89.549	ENSTTRG00000000082	GFI1	100	89.311	Tursiops_truncatus
ENSHGLG00000008020	GFI1	100	86.256	ENSUAMG00000021124	GFI1	97	83.964	Ursus_americanus
ENSHGLG00000008020	GFI1	100	68.171	ENSXETG00000023006	gfi1	99	66.979	Xenopus_tropicalis
ENSHGLG00000008020	GFI1	63	80.734	ENSXCOG00000013213	-	89	80.734	Xiphophorus_couchianus
ENSHGLG00000008020	GFI1	100	62.884	ENSXMAG00000010523	gfi1ab	100	62.383	Xiphophorus_maculatus
ENSHGLG00000008020	GFI1	87	53.067	ENSXMAG00000009274	GFI1	76	50.605	Xiphophorus_maculatus