EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000008285 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 24872 bases
Position: chrJH602202.1:2808699-2833570
Accession: 101707227
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000011553	SF3b1	PF08920.10	4.2e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000011680	-	3918	XM_004871703	ENSHGLP00000011553	1305 (aa)	XP_004871760	-

Gene Model

Click here to download ENSHGLG00000008285's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000008285's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000008285	-	99	100.000	ENSG00000115524	SF3B1	99	100.000	Homo_sapiens
ENSHGLG00000008285	-	99	93.716	ENSAPOG00000011894	sf3b1	99	93.578	Acanthochromis_polyacanthus
ENSHGLG00000008285	-	99	99.540	ENSAMEG00000013809	SF3B1	99	99.540	Ailuropoda_melanoleuca
ENSHGLG00000008285	-	99	93.170	ENSACIG00000020910	sf3b1	96	93.016	Amphilophus_citrinellus
ENSHGLG00000008285	-	99	93.578	ENSAOCG00000004478	sf3b1	99	93.578	Amphiprion_ocellaris
ENSHGLG00000008285	-	99	93.578	ENSAPEG00000012937	sf3b1	99	93.578	Amphiprion_percula
ENSHGLG00000008285	-	99	93.712	ENSATEG00000020435	sf3b1	99	93.712	Anabas_testudineus
ENSHGLG00000008285	-	99	99.078	ENSAPLG00000003993	SF3B1	99	99.078	Anas_platyrhynchos
ENSHGLG00000008285	-	99	98.919	ENSACAG00000009612	SF3B1	99	98.919	Anolis_carolinensis
ENSHGLG00000008285	-	99	100.000	ENSANAG00000021577	SF3B1	100	100.000	Aotus_nancymaae
ENSHGLG00000008285	-	99	92.808	ENSACLG00000023470	sf3b1	99	92.655	Astatotilapia_calliptera
ENSHGLG00000008285	-	99	94.109	ENSAMXG00000002219	sf3b1	99	93.956	Astyanax_mexicanus
ENSHGLG00000008285	-	99	99.923	ENSBTAG00000008915	SF3B1	99	99.923	Bos_taurus
ENSHGLG00000008285	-	98	66.440	WBGene00011605	sftb-1	98	66.516	Caenorhabditis_elegans
ENSHGLG00000008285	-	99	100.000	ENSCJAG00000003902	SF3B1	99	100.000	Callithrix_jacchus
ENSHGLG00000008285	-	99	100.000	ENSCAFG00000010826	SF3B1	99	100.000	Canis_familiaris
ENSHGLG00000008285	-	99	100.000	ENSCAFG00020004750	SF3B1	99	100.000	Canis_lupus_dingo
ENSHGLG00000008285	-	99	99.923	ENSCHIG00000015226	SF3B1	99	99.923	Capra_hircus
ENSHGLG00000008285	-	99	99.923	ENSTSYG00000009214	SF3B1	99	99.923	Carlito_syrichta
ENSHGLG00000008285	-	99	100.000	ENSCAPG00000006547	SF3B1	99	100.000	Cavia_aperea
ENSHGLG00000008285	-	99	100.000	ENSCPOG00000009353	SF3B1	100	100.000	Cavia_porcellus
ENSHGLG00000008285	-	99	100.000	ENSCCAG00000020506	SF3B1	99	100.000	Cebus_capucinus
ENSHGLG00000008285	-	99	100.000	ENSCATG00000035735	SF3B1	99	100.000	Cercocebus_atys
ENSHGLG00000008285	-	99	99.616	ENSCLAG00000014767	SF3B1	99	99.616	Chinchilla_lanigera
ENSHGLG00000008285	-	99	100.000	ENSCSAG00000011505	SF3B1	99	100.000	Chlorocebus_sabaeus
ENSHGLG00000008285	-	75	98.214	ENSCHOG00000009860	SF3B1	75	98.182	Choloepus_hoffmanni
ENSHGLG00000008285	-	99	99.228	ENSCPBG00000021902	SF3B1	99	99.406	Chrysemys_picta_bellii
ENSHGLG00000008285	-	68	78.060	ENSCING00000002558	-	99	78.771	Ciona_intestinalis
ENSHGLG00000008285	-	99	80.061	ENSCSAVG00000002559	-	99	79.665	Ciona_savignyi
ENSHGLG00000008285	-	100	99.387	ENSCANG00000029415	SF3B1	99	100.000	Colobus_angolensis_palliatus
ENSHGLG00000008285	-	99	100.000	ENSCGRG00001016990	Sf3b1	99	100.000	Cricetulus_griseus_chok1gshd
ENSHGLG00000008285	-	99	100.000	ENSCGRG00000005301	Sf3b1	99	100.000	Cricetulus_griseus_crigri
ENSHGLG00000008285	-	99	90.023	ENSCSEG00000003860	sf3b1	99	89.946	Cynoglossus_semilaevis
ENSHGLG00000008285	-	95	93.631	ENSCVAG00000003680	sf3b1	99	93.631	Cyprinodon_variegatus
ENSHGLG00000008285	-	99	93.578	ENSDARG00000056138	sf3b1	99	93.502	Danio_rerio
ENSHGLG00000008285	-	99	99.923	ENSDNOG00000011754	SF3B1	99	99.923	Dasypus_novemcinctus
ENSHGLG00000008285	-	99	97.297	ENSDORG00000002399	Sf3b1	100	97.297	Dipodomys_ordii
ENSHGLG00000008285	-	99	76.758	FBgn0031266	Sf3b1	99	76.758	Drosophila_melanogaster
ENSHGLG00000008285	-	83	99.351	ENSETEG00000009188	SF3B1	100	99.351	Echinops_telfairi
ENSHGLG00000008285	-	99	87.270	ENSEBUG00000004325	sf3b1	100	90.191	Eptatretus_burgeri
ENSHGLG00000008285	-	99	99.923	ENSEASG00005020159	SF3B1	97	99.923	Equus_asinus_asinus
ENSHGLG00000008285	-	99	99.923	ENSECAG00000021657	SF3B1	97	99.923	Equus_caballus
ENSHGLG00000008285	-	86	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSHGLG00000008285	-	99	93.085	ENSELUG00000005977	sf3b1	97	92.933	Esox_lucius
ENSHGLG00000008285	-	99	100.000	ENSFCAG00000005038	SF3B1	99	100.000	Felis_catus
ENSHGLG00000008285	-	99	99.080	ENSFALG00000004281	SF3B1	99	99.080	Ficedula_albicollis
ENSHGLG00000008285	-	99	100.000	ENSFDAG00000017510	SF3B1	99	100.000	Fukomys_damarensis
ENSHGLG00000008285	-	99	92.890	ENSFHEG00000014333	sf3b1	99	92.890	Fundulus_heteroclitus
ENSHGLG00000008285	-	99	93.487	ENSGMOG00000006773	sf3b1	99	93.487	Gadus_morhua
ENSHGLG00000008285	-	99	99.382	ENSGALG00000008038	SF3B1	99	99.382	Gallus_gallus
ENSHGLG00000008285	-	98	93.441	ENSGAFG00000000704	sf3b1	99	93.441	Gambusia_affinis
ENSHGLG00000008285	-	99	93.630	ENSGACG00000008839	sf3b1	99	93.630	Gasterosteus_aculeatus
ENSHGLG00000008285	-	99	99.228	ENSGAGG00000017478	SF3B1	99	99.228	Gopherus_agassizii
ENSHGLG00000008285	-	99	93.170	ENSGGOG00000009264	SF3B1	99	94.231	Gorilla_gorilla
ENSHGLG00000008285	-	99	92.874	ENSHBUG00000007705	sf3b1	99	92.720	Haplochromis_burtoni
ENSHGLG00000008285	-	100	98.008	ENSHGLG00100005535	-	100	98.008	Heterocephalus_glaber_male
ENSHGLG00000008285	-	99	93.004	ENSHCOG00000016775	sf3b1	99	92.852	Hippocampus_comes
ENSHGLG00000008285	-	99	93.956	ENSIPUG00000013171	sf3b1	99	93.956	Ictalurus_punctatus
ENSHGLG00000008285	-	99	100.000	ENSSTOG00000011034	SF3B1	99	100.000	Ictidomys_tridecemlineatus
ENSHGLG00000008285	-	99	99.922	ENSJJAG00000010903	Sf3b1	99	99.922	Jaculus_jaculus
ENSHGLG00000008285	-	99	93.059	ENSKMAG00000004009	sf3b1	99	92.982	Kryptolebias_marmoratus
ENSHGLG00000008285	-	99	93.543	ENSLBEG00000022208	sf3b1	99	93.390	Labrus_bergylta
ENSHGLG00000008285	-	99	92.003	ENSLACG00000014832	SF3B1	99	92.003	Latimeria_chalumnae
ENSHGLG00000008285	-	99	94.882	ENSLOCG00000003899	sf3b1	99	94.729	Lepisosteus_oculatus
ENSHGLG00000008285	-	99	100.000	ENSLAFG00000001956	SF3B1	99	100.000	Loxodonta_africana
ENSHGLG00000008285	-	99	99.846	ENSMMUG00000022430	SF3B1	99	99.846	Macaca_mulatta
ENSHGLG00000008285	-	100	99.464	ENSMNEG00000042333	SF3B1	100	100.000	Macaca_nemestrina
ENSHGLG00000008285	-	95	93.478	ENSMLEG00000026141	SF3B1	99	94.027	Mandrillus_leucophaeus
ENSHGLG00000008285	-	99	93.573	ENSMAMG00000010241	sf3b1	99	93.573	Mastacembelus_armatus
ENSHGLG00000008285	-	99	92.808	ENSMZEG00005021254	sf3b1	99	92.655	Maylandia_zebra
ENSHGLG00000008285	-	99	98.764	ENSMGAG00000007017	SF3B1	99	98.764	Meleagris_gallopavo
ENSHGLG00000008285	-	99	95.542	ENSMAUG00000009071	Sf3b1	99	95.542	Mesocricetus_auratus
ENSHGLG00000008285	-	99	99.923	ENSMICG00000013879	SF3B1	99	99.923	Microcebus_murinus
ENSHGLG00000008285	-	99	95.234	ENSMOCG00000000455	Sf3b1	100	95.234	Microtus_ochrogaster
ENSHGLG00000008285	-	83	93.094	ENSMMOG00000000475	sf3b1	99	93.094	Mola_mola
ENSHGLG00000008285	-	99	99.305	ENSMODG00000012275	SF3B1	99	99.305	Monodelphis_domestica
ENSHGLG00000008285	-	99	93.497	ENSMALG00000017211	sf3b1	99	93.497	Monopterus_albus
ENSHGLG00000008285	-	99	100.000	MGP_CAROLIEiJ_G0014141	Sf3b1	99	100.000	Mus_caroli
ENSHGLG00000008285	-	99	100.000	ENSMUSG00000025982	Sf3b1	99	100.000	Mus_musculus
ENSHGLG00000008285	-	99	100.000	MGP_SPRETEiJ_G0014947	Sf3b1	99	100.000	Mus_spretus
ENSHGLG00000008285	-	99	100.000	ENSMPUG00000007799	SF3B1	99	100.000	Mustela_putorius_furo
ENSHGLG00000008285	-	99	98.764	ENSMLUG00000000840	SF3B1	99	98.764	Myotis_lucifugus
ENSHGLG00000008285	-	99	100.000	ENSNGAG00000021884	-	99	100.000	Nannospalax_galili
ENSHGLG00000008285	-	99	89.034	ENSNBRG00000015816	sf3b1	99	89.034	Neolamprologus_brichardi
ENSHGLG00000008285	-	99	100.000	ENSNLEG00000006861	SF3B1	99	100.000	Nomascus_leucogenys
ENSHGLG00000008285	-	70	100.000	ENSMEUG00000015848	-	67	100.000	Notamacropus_eugenii
ENSHGLG00000008285	-	99	88.031	ENSOPRG00000008596	SF3B1	99	88.031	Ochotona_princeps
ENSHGLG00000008285	-	99	100.000	ENSODEG00000011153	-	99	100.000	Octodon_degus
ENSHGLG00000008285	-	99	92.808	ENSONIG00000013758	sf3b1	99	92.655	Oreochromis_niloticus
ENSHGLG00000008285	-	83	98.985	ENSOCUG00000012722	-	96	98.985	Oryctolagus_cuniculus
ENSHGLG00000008285	-	99	93.344	ENSORLG00000020219	sf3b1	99	93.344	Oryzias_latipes
ENSHGLG00000008285	-	99	93.344	ENSORLG00020001746	sf3b1	99	93.344	Oryzias_latipes_hni
ENSHGLG00000008285	-	63	90.854	ENSORLG00015001759	sf3b1	97	90.854	Oryzias_latipes_hsok
ENSHGLG00000008285	-	99	93.349	ENSOMEG00000019231	sf3b1	99	93.349	Oryzias_melastigma
ENSHGLG00000008285	-	99	99.923	ENSOARG00000015374	SF3B1	99	99.923	Ovis_aries
ENSHGLG00000008285	-	99	100.000	ENSPPAG00000035007	SF3B1	99	100.000	Pan_paniscus
ENSHGLG00000008285	-	99	100.000	ENSPPRG00000009090	SF3B1	99	100.000	Panthera_pardus
ENSHGLG00000008285	-	99	100.000	ENSPTIG00000021557	SF3B1	99	100.000	Panthera_tigris_altaica
ENSHGLG00000008285	-	99	91.455	ENSPTRG00000012771	SF3B1	99	91.455	Pan_troglodytes
ENSHGLG00000008285	-	99	100.000	ENSPANG00000013417	SF3B1	99	100.000	Papio_anubis
ENSHGLG00000008285	-	99	95.019	ENSPKIG00000000784	sf3b1	99	94.866	Paramormyrops_kingsleyae
ENSHGLG00000008285	-	99	97.766	ENSPSIG00000017222	SF3B1	99	97.766	Pelodiscus_sinensis
ENSHGLG00000008285	-	90	93.973	ENSPMGG00000004330	sf3b1	98	93.803	Periophthalmus_magnuspinnatus
ENSHGLG00000008285	-	99	100.000	ENSPEMG00000010699	Sf3b1	100	100.000	Peromyscus_maniculatus_bairdii
ENSHGLG00000008285	-	99	90.214	ENSPMAG00000001311	sf3b1	99	90.367	Petromyzon_marinus
ENSHGLG00000008285	-	99	99.228	ENSPCIG00000010642	SF3B1	99	99.228	Phascolarctos_cinereus
ENSHGLG00000008285	-	99	93.277	ENSPFOG00000000073	sf3b1	99	93.277	Poecilia_formosa
ENSHGLG00000008285	-	99	93.349	ENSPLAG00000002293	sf3b1	99	93.349	Poecilia_latipinna
ENSHGLG00000008285	-	99	93.349	ENSPMEG00000000446	sf3b1	97	93.349	Poecilia_mexicana
ENSHGLG00000008285	-	99	93.425	ENSPREG00000019652	sf3b1	99	93.425	Poecilia_reticulata
ENSHGLG00000008285	-	99	98.814	ENSPPYG00000013044	SF3B1	96	98.814	Pongo_abelii
ENSHGLG00000008285	-	99	99.846	ENSPCAG00000009292	SF3B1	99	99.846	Procavia_capensis
ENSHGLG00000008285	-	99	99.923	ENSPCOG00000024074	SF3B1	99	99.923	Propithecus_coquereli
ENSHGLG00000008285	-	99	100.000	ENSPVAG00000008302	SF3B1	99	100.000	Pteropus_vampyrus
ENSHGLG00000008285	-	99	92.808	ENSPNYG00000014939	sf3b1	99	92.655	Pundamilia_nyererei
ENSHGLG00000008285	-	99	93.956	ENSPNAG00000008288	sf3b1	99	93.956	Pygocentrus_nattereri
ENSHGLG00000008285	-	99	100.000	ENSRNOG00000013516	Sf3b1	99	100.000	Rattus_norvegicus
ENSHGLG00000008285	-	99	96.451	ENSRBIG00000026096	SF3B1	99	96.451	Rhinopithecus_bieti
ENSHGLG00000008285	-	99	100.000	ENSRROG00000031308	SF3B1	99	100.000	Rhinopithecus_roxellana
ENSHGLG00000008285	-	99	100.000	ENSSBOG00000020080	SF3B1	99	100.000	Saimiri_boliviensis_boliviensis
ENSHGLG00000008285	-	99	99.305	ENSSHAG00000017564	SF3B1	99	99.305	Sarcophilus_harrisii
ENSHGLG00000008285	-	99	94.572	ENSSFOG00015021535	sf3b1	99	94.725	Scleropages_formosus
ENSHGLG00000008285	-	99	92.906	ENSSMAG00000013977	sf3b1	98	92.754	Scophthalmus_maximus
ENSHGLG00000008285	-	99	93.344	ENSSDUG00000017422	sf3b1	99	93.344	Seriola_dumerili
ENSHGLG00000008285	-	99	93.267	ENSSLDG00000019495	sf3b1	99	93.267	Seriola_lalandi_dorsalis
ENSHGLG00000008285	-	76	100.000	ENSSARG00000007016	SF3B1	76	100.000	Sorex_araneus
ENSHGLG00000008285	-	99	99.073	ENSSPUG00000000410	SF3B1	99	99.073	Sphenodon_punctatus
ENSHGLG00000008285	-	99	93.650	ENSSPAG00000010451	sf3b1	98	93.650	Stegastes_partitus
ENSHGLG00000008285	-	90	99.576	ENSSSCG00000016075	SF3B1	100	100.000	Sus_scrofa
ENSHGLG00000008285	-	99	99.305	ENSTGUG00000010553	SF3B1	99	99.305	Taeniopygia_guttata
ENSHGLG00000008285	-	99	93.420	ENSTRUG00000015534	sf3b1	99	93.267	Takifugu_rubripes
ENSHGLG00000008285	-	87	100.000	ENSTBEG00000008714	SF3B1	92	100.000	Tupaia_belangeri
ENSHGLG00000008285	-	92	94.185	ENSTTRG00000003414	SF3B1	92	94.185	Tursiops_truncatus
ENSHGLG00000008285	-	94	95.530	ENSUAMG00000018506	SF3B1	99	99.190	Ursus_americanus
ENSHGLG00000008285	-	99	100.000	ENSUMAG00000020945	SF3B1	99	100.000	Ursus_maritimus
ENSHGLG00000008285	-	99	91.815	ENSVPAG00000005798	SF3B1	99	91.815	Vicugna_pacos
ENSHGLG00000008285	-	99	100.000	ENSVVUG00000025948	SF3B1	94	100.000	Vulpes_vulpes
ENSHGLG00000008285	-	99	96.757	ENSXETG00000013339	sf3b1	99	96.757	Xenopus_tropicalis
ENSHGLG00000008285	-	99	89.838	ENSXCOG00000018086	sf3b1	99	89.724	Xiphophorus_couchianus
ENSHGLG00000008285	-	99	93.349	ENSXMAG00000007369	sf3b1	99	93.648	Xiphophorus_maculatus