EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000008344 (Gene tree)
Gene ID: -
Gene Symbol: Srrt
Alias: -
Full Name: Heterocephalus glaber serrate%2C RNA effector molecule (Srrt)%2C mRNA.
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 10016 bases
Position: chrJH602053.1:16282005-16292020
Accession: NM_001310221
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000011633	ARS2	PF04959.13	2.6e-91	1	1
ENSHGLP00000011632	ARS2	PF04959.13	3.5e-91	1	1
ENSHGLP00000011631	ARS2	PF04959.13	5e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000011760	-	2634	XM_021254180	ENSHGLP00000011632	877 (aa)	XP_021109839	-
ENSHGLT00000011761	-	1527	-	ENSHGLP00000011633	508 (aa)	-	-
ENSHGLT00000011759	-	2652	XM_013070531	ENSHGLP00000011631	883 (aa)	XP_012925985	-

Gene Model

Click here to download ENSHGLG00000008344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000008344's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000008344	Srrt	100	97.608	ENSG00000087087	SRRT	99	100.000	Homo_sapiens
ENSHGLG00000008344	Srrt	89	71.949	ENSAPOG00000002304	srrt	96	63.793	Acanthochromis_polyacanthus
ENSHGLG00000008344	Srrt	98	92.212	ENSAMEG00000014506	SRRT	98	93.228	Ailuropoda_melanoleuca
ENSHGLG00000008344	Srrt	89	71.734	ENSACIG00000015795	srrt	85	74.946	Amphilophus_citrinellus
ENSHGLG00000008344	Srrt	93	58.418	ENSAOCG00000009189	-	96	56.437	Amphiprion_ocellaris
ENSHGLG00000008344	Srrt	89	72.163	ENSAOCG00000009693	srrt	85	75.375	Amphiprion_ocellaris
ENSHGLG00000008344	Srrt	93	58.418	ENSAPEG00000020016	-	96	56.437	Amphiprion_percula
ENSHGLG00000008344	Srrt	89	71.734	ENSAPEG00000003646	srrt	85	74.946	Amphiprion_percula
ENSHGLG00000008344	Srrt	95	63.680	ENSATEG00000014425	srrt	96	63.176	Anabas_testudineus
ENSHGLG00000008344	Srrt	94	57.086	ENSATEG00000003652	-	85	63.071	Anabas_testudineus
ENSHGLG00000008344	Srrt	95	76.478	ENSACAG00000001014	SRRT	96	76.436	Anolis_carolinensis
ENSHGLG00000008344	Srrt	100	97.267	ENSANAG00000031718	SRRT	100	97.267	Aotus_nancymaae
ENSHGLG00000008344	Srrt	89	70.450	ENSACLG00000013156	srrt	92	64.360	Astatotilapia_calliptera
ENSHGLG00000008344	Srrt	94	57.143	ENSACLG00000009423	-	96	54.857	Astatotilapia_calliptera
ENSHGLG00000008344	Srrt	88	70.933	ENSAMXG00000016671	srrt	93	64.794	Astyanax_mexicanus
ENSHGLG00000008344	Srrt	100	96.014	ENSBTAG00000001134	SRRT	100	96.014	Bos_taurus
ENSHGLG00000008344	Srrt	68	44.094	WBGene00017085	E01A2.2	80	47.500	Caenorhabditis_elegans
ENSHGLG00000008344	Srrt	100	96.811	ENSCJAG00000014917	SRRT	100	96.811	Callithrix_jacchus
ENSHGLG00000008344	Srrt	100	97.267	ENSCAFG00000023538	SRRT	100	97.267	Canis_familiaris
ENSHGLG00000008344	Srrt	100	97.039	ENSCAFG00020013358	SRRT	100	97.039	Canis_lupus_dingo
ENSHGLG00000008344	Srrt	100	96.355	ENSCHIG00000010495	SRRT	100	96.355	Capra_hircus
ENSHGLG00000008344	Srrt	96	90.974	ENSTSYG00000036426	SRRT	99	93.317	Carlito_syrichta
ENSHGLG00000008344	Srrt	95	96.535	ENSCAPG00000013586	SRRT	100	96.535	Cavia_aperea
ENSHGLG00000008344	Srrt	100	98.066	ENSCPOG00000001739	SRRT	100	98.066	Cavia_porcellus
ENSHGLG00000008344	Srrt	100	97.267	ENSCCAG00000015877	SRRT	100	97.267	Cebus_capucinus
ENSHGLG00000008344	Srrt	100	97.035	ENSCATG00000036306	SRRT	100	97.035	Cercocebus_atys
ENSHGLG00000008344	Srrt	100	98.292	ENSCLAG00000007568	SRRT	100	98.292	Chinchilla_lanigera
ENSHGLG00000008344	Srrt	100	97.267	ENSCSAG00000017996	SRRT	100	97.267	Chlorocebus_sabaeus
ENSHGLG00000008344	Srrt	56	93.529	ENSCHOG00000007815	SRRT	67	94.083	Choloepus_hoffmanni
ENSHGLG00000008344	Srrt	75	81.992	ENSCPBG00000011553	SRRT	83	81.955	Chrysemys_picta_bellii
ENSHGLG00000008344	Srrt	98	45.310	ENSCING00000003506	-	54	51.646	Ciona_intestinalis
ENSHGLG00000008344	Srrt	89	47.368	ENSCSAVG00000008394	-	81	54.039	Ciona_savignyi
ENSHGLG00000008344	Srrt	100	96.925	ENSCANG00000034556	SRRT	100	96.925	Colobus_angolensis_palliatus
ENSHGLG00000008344	Srrt	100	96.364	ENSCGRG00001001594	Srrt	100	96.364	Cricetulus_griseus_chok1gshd
ENSHGLG00000008344	Srrt	100	95.534	ENSCGRG00000007292	Srrt	100	95.534	Cricetulus_griseus_crigri
ENSHGLG00000008344	Srrt	94	57.490	ENSCSEG00000005233	-	54	59.283	Cynoglossus_semilaevis
ENSHGLG00000008344	Srrt	89	67.982	ENSCSEG00000017878	srrt	96	59.188	Cynoglossus_semilaevis
ENSHGLG00000008344	Srrt	90	54.419	ENSCVAG00000017344	-	95	54.479	Cyprinodon_variegatus
ENSHGLG00000008344	Srrt	89	70.664	ENSCVAG00000019848	srrt	96	63.521	Cyprinodon_variegatus
ENSHGLG00000008344	Srrt	89	72.163	ENSDARG00000017762	srrt	96	65.529	Danio_rerio
ENSHGLG00000008344	Srrt	100	97.153	ENSDNOG00000003851	SRRT	100	97.153	Dasypus_novemcinctus
ENSHGLG00000008344	Srrt	100	94.701	ENSDORG00000005584	Srrt	100	95.006	Dipodomys_ordii
ENSHGLG00000008344	Srrt	89	49.688	FBgn0033062	Ars2	67	52.830	Drosophila_melanogaster
ENSHGLG00000008344	Srrt	91	92.259	ENSETEG00000016175	SRRT	82	94.737	Echinops_telfairi
ENSHGLG00000008344	Srrt	89	59.227	ENSEBUG00000008517	-	76	63.889	Eptatretus_burgeri
ENSHGLG00000008344	Srrt	100	97.039	ENSEASG00005016956	SRRT	100	97.039	Equus_asinus_asinus
ENSHGLG00000008344	Srrt	100	97.153	ENSECAG00000012292	SRRT	100	97.153	Equus_caballus
ENSHGLG00000008344	Srrt	85	98.171	ENSEEUG00000009117	SRRT	93	97.727	Erinaceus_europaeus
ENSHGLG00000008344	Srrt	89	70.488	ENSELUG00000006651	srrt	96	64.660	Esox_lucius
ENSHGLG00000008344	Srrt	89	59.834	ENSELUG00000021216	-	96	56.250	Esox_lucius
ENSHGLG00000008344	Srrt	100	97.380	ENSFCAG00000006855	SRRT	100	97.380	Felis_catus
ENSHGLG00000008344	Srrt	58	51.899	ENSFALG00000007524	-	78	79.630	Ficedula_albicollis
ENSHGLG00000008344	Srrt	100	93.964	ENSFDAG00000021347	SRRT	100	93.964	Fukomys_damarensis
ENSHGLG00000008344	Srrt	93	54.675	ENSFHEG00000004105	-	93	55.603	Fundulus_heteroclitus
ENSHGLG00000008344	Srrt	91	67.089	ENSFHEG00000002756	srrt	89	73.571	Fundulus_heteroclitus
ENSHGLG00000008344	Srrt	86	58.114	ENSGMOG00000018694	-	98	51.256	Gadus_morhua
ENSHGLG00000008344	Srrt	95	62.357	ENSGMOG00000018619	srrt	96	60.616	Gadus_morhua
ENSHGLG00000008344	Srrt	89	70.664	ENSGAFG00000005423	srrt	96	63.510	Gambusia_affinis
ENSHGLG00000008344	Srrt	93	53.471	ENSGAFG00000020383	-	96	54.289	Gambusia_affinis
ENSHGLG00000008344	Srrt	95	68.064	ENSGACG00000020387	srrt	96	62.429	Gasterosteus_aculeatus
ENSHGLG00000008344	Srrt	94	55.221	ENSGACG00000001100	-	96	53.022	Gasterosteus_aculeatus
ENSHGLG00000008344	Srrt	100	97.608	ENSGGOG00000001508	SRRT	99	97.608	Gorilla_gorilla
ENSHGLG00000008344	Srrt	89	70.664	ENSHBUG00000002942	srrt	92	64.475	Haplochromis_burtoni
ENSHGLG00000008344	Srrt	100	99.088	ENSHGLG00100018857	Srrt	100	99.088	Heterocephalus_glaber_male
ENSHGLG00000008344	Srrt	90	56.871	ENSHCOG00000008904	-	95	53.073	Hippocampus_comes
ENSHGLG00000008344	Srrt	98	62.116	ENSHCOG00000005403	srrt	96	62.633	Hippocampus_comes
ENSHGLG00000008344	Srrt	89	71.795	ENSIPUG00000021150	srrt	96	66.552	Ictalurus_punctatus
ENSHGLG00000008344	Srrt	100	97.153	ENSSTOG00000013776	SRRT	100	97.153	Ictidomys_tridecemlineatus
ENSHGLG00000008344	Srrt	100	94.457	ENSJJAG00000010446	Srrt	100	94.457	Jaculus_jaculus
ENSHGLG00000008344	Srrt	94	55.773	ENSKMAG00000008468	-	96	54.400	Kryptolebias_marmoratus
ENSHGLG00000008344	Srrt	94	68.303	ENSKMAG00000013599	srrt	96	63.895	Kryptolebias_marmoratus
ENSHGLG00000008344	Srrt	96	64.671	ENSLBEG00000016308	srrt	81	75.693	Labrus_bergylta
ENSHGLG00000008344	Srrt	58	57.003	ENSLBEG00000028983	-	96	49.921	Labrus_bergylta
ENSHGLG00000008344	Srrt	95	63.929	ENSLACG00000001089	SRRT	96	64.664	Latimeria_chalumnae
ENSHGLG00000008344	Srrt	94	63.223	ENSLOCG00000013658	srrt	100	60.333	Lepisosteus_oculatus
ENSHGLG00000008344	Srrt	100	97.149	ENSLAFG00000007725	SRRT	100	97.149	Loxodonta_africana
ENSHGLG00000008344	Srrt	100	97.039	ENSMFAG00000033745	SRRT	100	97.039	Macaca_fascicularis
ENSHGLG00000008344	Srrt	100	97.836	ENSMMUG00000021255	SRRT	100	97.836	Macaca_mulatta
ENSHGLG00000008344	Srrt	100	97.267	ENSMNEG00000041864	SRRT	100	97.267	Macaca_nemestrina
ENSHGLG00000008344	Srrt	100	97.039	ENSMLEG00000029479	SRRT	100	97.039	Mandrillus_leucophaeus
ENSHGLG00000008344	Srrt	89	69.593	ENSMAMG00000014311	srrt	96	65.046	Mastacembelus_armatus
ENSHGLG00000008344	Srrt	94	57.143	ENSMAMG00000010681	-	96	56.497	Mastacembelus_armatus
ENSHGLG00000008344	Srrt	94	57.143	ENSMZEG00005028002	-	96	55.200	Maylandia_zebra
ENSHGLG00000008344	Srrt	89	70.450	ENSMZEG00005016135	srrt	92	64.360	Maylandia_zebra
ENSHGLG00000008344	Srrt	100	95.136	ENSMAUG00000011386	Srrt	100	95.136	Mesocricetus_auratus
ENSHGLG00000008344	Srrt	100	97.153	ENSMICG00000009471	SRRT	100	97.153	Microcebus_murinus
ENSHGLG00000008344	Srrt	100	95.786	ENSMOCG00000001971	Srrt	100	95.786	Microtus_ochrogaster
ENSHGLG00000008344	Srrt	95	66.733	ENSMMOG00000016399	srrt	96	63.722	Mola_mola
ENSHGLG00000008344	Srrt	89	61.441	ENSMMOG00000011137	-	55	65.042	Mola_mola
ENSHGLG00000008344	Srrt	90	84.244	ENSMODG00000004862	SRRT	90	91.701	Monodelphis_domestica
ENSHGLG00000008344	Srrt	99	50.595	ENSMALG00000005567	-	84	52.967	Monopterus_albus
ENSHGLG00000008344	Srrt	89	67.024	ENSMALG00000018604	srrt	80	70.878	Monopterus_albus
ENSHGLG00000008344	Srrt	100	96.014	MGP_CAROLIEiJ_G0027870	Srrt	100	96.715	Mus_caroli
ENSHGLG00000008344	Srrt	100	96.014	ENSMUSG00000037364	Srrt	100	96.014	Mus_musculus
ENSHGLG00000008344	Srrt	100	96.014	MGP_PahariEiJ_G0024456	Srrt	100	96.350	Mus_pahari
ENSHGLG00000008344	Srrt	100	96.014	MGP_SPRETEiJ_G0028875	Srrt	100	96.715	Mus_spretus
ENSHGLG00000008344	Srrt	100	97.153	ENSMPUG00000015839	SRRT	100	97.153	Mustela_putorius_furo
ENSHGLG00000008344	Srrt	100	96.583	ENSMLUG00000009975	SRRT	100	96.583	Myotis_lucifugus
ENSHGLG00000008344	Srrt	100	96.469	ENSNGAG00000023715	Srrt	100	96.469	Nannospalax_galili
ENSHGLG00000008344	Srrt	89	69.528	ENSNBRG00000019100	srrt	96	62.761	Neolamprologus_brichardi
ENSHGLG00000008344	Srrt	95	87.500	ENSNLEG00000011987	SRRT	99	87.363	Nomascus_leucogenys
ENSHGLG00000008344	Srrt	98	73.495	ENSMEUG00000011941	SRRT	98	72.222	Notamacropus_eugenii
ENSHGLG00000008344	Srrt	82	87.799	ENSOPRG00000002502	-	67	100.000	Ochotona_princeps
ENSHGLG00000008344	Srrt	100	97.267	ENSODEG00000016856	SRRT	100	97.267	Octodon_degus
ENSHGLG00000008344	Srrt	89	70.878	ENSONIG00000004242	srrt	96	65.349	Oreochromis_niloticus
ENSHGLG00000008344	Srrt	94	57.229	ENSONIG00000016080	-	95	54.713	Oreochromis_niloticus
ENSHGLG00000008344	Srrt	94	68.303	ENSORLG00000008120	srrt	96	64.079	Oryzias_latipes
ENSHGLG00000008344	Srrt	92	68.815	ENSORLG00020003058	srrt	96	64.079	Oryzias_latipes_hni
ENSHGLG00000008344	Srrt	94	68.098	ENSORLG00015008062	srrt	96	63.963	Oryzias_latipes_hsok
ENSHGLG00000008344	Srrt	96	66.204	ENSOMEG00000003155	srrt	87	73.448	Oryzias_melastigma
ENSHGLG00000008344	Srrt	93	56.448	ENSOMEG00000006963	-	96	56.624	Oryzias_melastigma
ENSHGLG00000008344	Srrt	100	97.494	ENSOGAG00000017242	SRRT	100	97.494	Otolemur_garnettii
ENSHGLG00000008344	Srrt	100	95.701	ENSOARG00000015645	SRRT	100	95.701	Ovis_aries
ENSHGLG00000008344	Srrt	100	97.267	ENSPPAG00000041090	SRRT	100	97.267	Pan_paniscus
ENSHGLG00000008344	Srrt	100	96.697	ENSPPRG00000009557	SRRT	100	96.697	Panthera_pardus
ENSHGLG00000008344	Srrt	100	97.267	ENSPTIG00000014355	SRRT	100	97.267	Panthera_tigris_altaica
ENSHGLG00000008344	Srrt	100	97.267	ENSPTRG00000019511	SRRT	100	97.267	Pan_troglodytes
ENSHGLG00000008344	Srrt	100	93.738	ENSPANG00000020763	SRRT	98	96.279	Papio_anubis
ENSHGLG00000008344	Srrt	96	70.741	ENSPKIG00000005434	srrt	96	66.930	Paramormyrops_kingsleyae
ENSHGLG00000008344	Srrt	94	66.945	ENSPKIG00000022212	-	96	66.745	Paramormyrops_kingsleyae
ENSHGLG00000008344	Srrt	100	78.977	ENSPSIG00000016311	SRRT	96	80.471	Pelodiscus_sinensis
ENSHGLG00000008344	Srrt	89	70.878	ENSPMGG00000002841	srrt	56	73.876	Periophthalmus_magnuspinnatus
ENSHGLG00000008344	Srrt	100	94.118	ENSPEMG00000010834	Srrt	100	95.285	Peromyscus_maniculatus_bairdii
ENSHGLG00000008344	Srrt	99	58.812	ENSPMAG00000009614	-	95	54.407	Petromyzon_marinus
ENSHGLG00000008344	Srrt	98	89.699	ENSPCIG00000000816	SRRT	98	90.741	Phascolarctos_cinereus
ENSHGLG00000008344	Srrt	93	52.798	ENSPFOG00000016554	-	96	53.341	Poecilia_formosa
ENSHGLG00000008344	Srrt	89	70.726	ENSPFOG00000005704	srrt	96	63.668	Poecilia_formosa
ENSHGLG00000008344	Srrt	93	52.491	ENSPLAG00000004526	-	96	53.333	Poecilia_latipinna
ENSHGLG00000008344	Srrt	89	70.450	ENSPLAG00000021992	srrt	96	63.490	Poecilia_latipinna
ENSHGLG00000008344	Srrt	89	70.299	ENSPMEG00000001182	srrt	96	63.437	Poecilia_mexicana
ENSHGLG00000008344	Srrt	90	51.945	ENSPMEG00000001520	-	95	52.536	Poecilia_mexicana
ENSHGLG00000008344	Srrt	89	70.726	ENSPREG00000022308	srrt	96	63.668	Poecilia_reticulata
ENSHGLG00000008344	Srrt	100	87.244	ENSPPYG00000017432	SRRT	100	87.244	Pongo_abelii
ENSHGLG00000008344	Srrt	98	90.878	ENSPCAG00000001621	SRRT	100	92.377	Procavia_capensis
ENSHGLG00000008344	Srrt	100	97.380	ENSPCOG00000025751	SRRT	100	97.380	Propithecus_coquereli
ENSHGLG00000008344	Srrt	100	88.676	ENSPVAG00000000834	SRRT	100	89.443	Pteropus_vampyrus
ENSHGLG00000008344	Srrt	89	70.450	ENSPNYG00000018710	srrt	96	64.360	Pundamilia_nyererei
ENSHGLG00000008344	Srrt	80	71.739	ENSPNAG00000010629	srrt	95	53.881	Pygocentrus_nattereri
ENSHGLG00000008344	Srrt	91	85.928	ENSRNOG00000048277	AABR07035787.1	93	85.928	Rattus_norvegicus
ENSHGLG00000008344	Srrt	100	97.267	ENSRBIG00000035718	SRRT	100	97.267	Rhinopithecus_bieti
ENSHGLG00000008344	Srrt	100	97.267	ENSRROG00000030622	SRRT	100	97.267	Rhinopithecus_roxellana
ENSHGLG00000008344	Srrt	100	97.267	ENSSBOG00000033570	SRRT	100	97.267	Saimiri_boliviensis_boliviensis
ENSHGLG00000008344	Srrt	93	86.939	ENSSHAG00000007349	-	100	84.953	Sarcophilus_harrisii
ENSHGLG00000008344	Srrt	90	74.468	ENSSFOG00015017293	srrt	96	67.804	Scleropages_formosus
ENSHGLG00000008344	Srrt	89	56.933	ENSSMAG00000018195	-	95	52.515	Scophthalmus_maximus
ENSHGLG00000008344	Srrt	95	64.527	ENSSMAG00000015342	srrt	96	64.849	Scophthalmus_maximus
ENSHGLG00000008344	Srrt	93	53.157	ENSSDUG00000002051	-	93	54.622	Seriola_dumerili
ENSHGLG00000008344	Srrt	89	70.664	ENSSDUG00000012049	srrt	96	64.637	Seriola_dumerili
ENSHGLG00000008344	Srrt	89	70.450	ENSSLDG00000017477	srrt	81	74.518	Seriola_lalandi_dorsalis
ENSHGLG00000008344	Srrt	89	70.851	ENSSPAG00000005665	srrt	94	63.982	Stegastes_partitus
ENSHGLG00000008344	Srrt	89	55.217	ENSSPAG00000018943	-	95	55.194	Stegastes_partitus
ENSHGLG00000008344	Srrt	95	93.758	ENSSSCG00000024789	SRRT	99	93.811	Sus_scrofa
ENSHGLG00000008344	Srrt	90	53.491	ENSTRUG00000000023	-	94	53.846	Takifugu_rubripes
ENSHGLG00000008344	Srrt	96	64.177	ENSTRUG00000016075	srrt	96	64.409	Takifugu_rubripes
ENSHGLG00000008344	Srrt	94	56.137	ENSTNIG00000003111	-	96	53.165	Tetraodon_nigroviridis
ENSHGLG00000008344	Srrt	89	69.767	ENSTNIG00000011779	srrt	100	61.185	Tetraodon_nigroviridis
ENSHGLG00000008344	Srrt	63	57.396	ENSTNIG00000019765	-	95	64.038	Tetraodon_nigroviridis
ENSHGLG00000008344	Srrt	81	91.599	ENSTBEG00000005212	SRRT	66	96.875	Tupaia_belangeri
ENSHGLG00000008344	Srrt	100	96.355	ENSTTRG00000011104	SRRT	100	96.355	Tursiops_truncatus
ENSHGLG00000008344	Srrt	95	97.136	ENSUAMG00000027997	SRRT	98	97.136	Ursus_americanus
ENSHGLG00000008344	Srrt	100	97.267	ENSUMAG00000011295	SRRT	100	97.267	Ursus_maritimus
ENSHGLG00000008344	Srrt	100	97.267	ENSVVUG00000023572	SRRT	100	97.267	Vulpes_vulpes
ENSHGLG00000008344	Srrt	89	71.459	ENSXETG00000025124	srrt	96	61.440	Xenopus_tropicalis
ENSHGLG00000008344	Srrt	89	51.747	ENSXCOG00000013105	-	90	51.965	Xiphophorus_couchianus
ENSHGLG00000008344	Srrt	89	71.092	ENSXMAG00000007627	srrt	96	63.972	Xiphophorus_maculatus
ENSHGLG00000008344	Srrt	93	53.228	ENSXMAG00000002090	-	96	53.738	Xiphophorus_maculatus