EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHGLG00000008679 (Gene tree)
Gene ID
-
Gene Symbol
RBFOX3
Alias
FOX-3|HRNBP3|NeuN
Full Name
RNA binding fox-1 homolog 3
Gene Type
protein_coding
Species
Heterocephalus_glaber_female
Status
putative
Strand
Minus strand
Length
20368 bases
Position
chrJH602114.1:8404285-8424652
Accession
101711607
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHGLP00000012133Fox-1_CPF12414.83.5e-4211
ENSHGLP00000012134Fox-1_CPF12414.84e-4211
ENSHGLP00000012132Fox-1_CPF12414.84.5e-4211
ENSHGLP00000012132RRM_1PF00076.221.1e-1811
ENSHGLP00000012134RRM_1PF00076.221.2e-1811
ENSHGLP00000012133RRM_1PF00076.229.5e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHGLT00000012268RBFOX3-2031137-ENSHGLP00000012134378 (aa)XP_021096871UPI0003501B88
ENSHGLT00000012266RBFOX3-2011131XM_004860857ENSHGLP00000012132364 (aa)XP_004860915UPI0003503348
ENSHGLT00000012267RBFOX3-2021002-ENSHGLP00000012133333 (aa)--
Gene Model
Click here to download ENSHGLG00000008679's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000008679's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHGLG00000008679RBFOX310062.087ENSHGLG00000016944RBFOX19158.373
ENSHGLG00000008679RBFOX39656.079ENSHGLG00000012907RBFOX29256.219
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHGLG00000008679RBFOX310096.429ENSG00000167281RBFOX310097.179Homo_sapiens
ENSHGLG00000008679RBFOX310071.053ENSAPOG00000021630rbfox3b8269.672Acanthochromis_polyacanthus
ENSHGLG00000008679RBFOX38080.769ENSAPOG00000015658-8957.300Acanthochromis_polyacanthus
ENSHGLG00000008679RBFOX39877.480ENSAMEG00000014170RBFOX39373.494Ailuropoda_melanoleuca
ENSHGLG00000008679RBFOX38380.632ENSACIG00000010817rbfox3b9564.607Amphilophus_citrinellus
ENSHGLG00000008679RBFOX37172.924ENSACIG00000003768-8359.773Amphilophus_citrinellus
ENSHGLG00000008679RBFOX310070.219ENSAOCG00000012358rbfox3b8168.750Amphiprion_ocellaris
ENSHGLG00000008679RBFOX39665.057ENSAOCG00000010786-8065.169Amphiprion_ocellaris
ENSHGLG00000008679RBFOX37980.769ENSAPEG00000015891-7961.067Amphiprion_percula
ENSHGLG00000008679RBFOX37693.750ENSAPEG00000019081rbfox3b7493.333Amphiprion_percula
ENSHGLG00000008679RBFOX39666.572ENSATEG00000023101-9365.826Anabas_testudineus
ENSHGLG00000008679RBFOX310070.845ENSATEG00000019945rbfox3b9669.663Anabas_testudineus
ENSHGLG00000008679RBFOX310076.776ENSACAG00000016093RBFOX38377.208Anolis_carolinensis
ENSHGLG00000008679RBFOX310095.495ENSANAG00000023457RBFOX39195.495Aotus_nancymaae
ENSHGLG00000008679RBFOX310069.755ENSACLG00000025552-8168.466Astatotilapia_calliptera
ENSHGLG00000008679RBFOX310070.526ENSACLG00000020011rbfox3b9568.466Astatotilapia_calliptera
ENSHGLG00000008679RBFOX310066.667ENSAMXG00000042841rbfox3b8565.819Astyanax_mexicanus
ENSHGLG00000008679RBFOX39670.056ENSAMXG00000037246rbfox3a9070.621Astyanax_mexicanus
ENSHGLG00000008679RBFOX39793.210ENSBTAG00000006280RBFOX39794.444Bos_taurus
ENSHGLG00000008679RBFOX310095.604ENSCJAG00000009563RBFOX310095.604Callithrix_jacchus
ENSHGLG00000008679RBFOX38081.034ENSCAFG00000005547RBFOX310075.227Canis_familiaris
ENSHGLG00000008679RBFOX310096.296ENSCAFG00020008126RBFOX310096.296Canis_lupus_dingo
ENSHGLG00000008679RBFOX39893.767ENSCHIG00000009124RBFOX39894.851Capra_hircus
ENSHGLG00000008679RBFOX310096.997ENSTSYG00000029617RBFOX310096.997Carlito_syrichta
ENSHGLG00000008679RBFOX310097.619ENSCPOG00000021703RBFOX310097.619Cavia_porcellus
ENSHGLG00000008679RBFOX310095.495ENSCCAG00000028450RBFOX310095.495Cebus_capucinus
ENSHGLG00000008679RBFOX39790.741ENSCATG00000018349RBFOX310084.066Cercocebus_atys
ENSHGLG00000008679RBFOX310097.619ENSCLAG00000006449RBFOX310097.619Chinchilla_lanigera
ENSHGLG00000008679RBFOX310084.341ENSCSAG00000002355RBFOX310084.341Chlorocebus_sabaeus
ENSHGLG00000008679RBFOX39676.033ENSCPBG00000010904RBFOX39577.364Chrysemys_picta_bellii
ENSHGLG00000008679RBFOX310097.090ENSCANG00000043120RBFOX310097.090Colobus_angolensis_palliatus
ENSHGLG00000008679RBFOX39894.038ENSCGRG00001019476Rbfox39895.122Cricetulus_griseus_chok1gshd
ENSHGLG00000008679RBFOX39894.038ENSCGRG00000003268Rbfox39895.122Cricetulus_griseus_crigri
ENSHGLG00000008679RBFOX310056.911ENSCSEG00000020606RBFOX38358.284Cynoglossus_semilaevis
ENSHGLG00000008679RBFOX38480.769ENSCSEG00000015567RBFOX38963.185Cynoglossus_semilaevis
ENSHGLG00000008679RBFOX310070.219ENSCVAG00000006882rbfox3b8168.750Cyprinodon_variegatus
ENSHGLG00000008679RBFOX310063.174ENSDARG00000074310rbfox3b9669.262Danio_rerio
ENSHGLG00000008679RBFOX39669.209ENSDARG00000010083rbfox3a9169.774Danio_rerio
ENSHGLG00000008679RBFOX39181.024ENSDNOG00000039391RBFOX39478.212Dasypus_novemcinctus
ENSHGLG00000008679RBFOX39684.022ENSDORG00000005352Rbfox39684.022Dipodomys_ordii
ENSHGLG00000008679RBFOX38652.795ENSEBUG00000013559RBFOX37152.475Eptatretus_burgeri
ENSHGLG00000008679RBFOX310063.171ENSEBUG00000002129RBFOX39263.032Eptatretus_burgeri
ENSHGLG00000008679RBFOX310084.066ENSEASG00005005059RBFOX310084.066Equus_asinus_asinus
ENSHGLG00000008679RBFOX310084.341ENSECAG00000023811RBFOX310084.341Equus_caballus
ENSHGLG00000008679RBFOX39881.030ENSEEUG00000013974RBFOX39881.301Erinaceus_europaeus
ENSHGLG00000008679RBFOX310070.341ENSELUG00000017963rbfox3b9565.421Esox_lucius
ENSHGLG00000008679RBFOX39791.667ENSFCAG00000002555RBFOX39792.593Felis_catus
ENSHGLG00000008679RBFOX39669.167ENSFALG00000012288RBFOX39261.611Ficedula_albicollis
ENSHGLG00000008679RBFOX310093.651ENSFDAG00000007489RBFOX310093.651Fukomys_damarensis
ENSHGLG00000008679RBFOX310067.761ENSFHEG00000008550rbfox3b9566.044Fundulus_heteroclitus
ENSHGLG00000008679RBFOX310062.565ENSGMOG00000019304-9171.104Gadus_morhua
ENSHGLG00000008679RBFOX39678.223ENSGALG00000032889RBFOX38379.370Gallus_gallus
ENSHGLG00000008679RBFOX39868.156ENSGAFG00000005025rbfox3b8667.614Gambusia_affinis
ENSHGLG00000008679RBFOX39671.196ENSGACG00000002138-9671.467Gasterosteus_aculeatus
ENSHGLG00000008679RBFOX39676.033ENSGAGG00000020025RBFOX39577.364Gopherus_agassizii
ENSHGLG00000008679RBFOX310096.825ENSGGOG00000012546RBFOX310096.825Gorilla_gorilla
ENSHGLG00000008679RBFOX310070.079ENSHBUG00000023098-9068.852Haplochromis_burtoni
ENSHGLG00000008679RBFOX310070.526ENSHBUG00000018099rbfox3b8269.399Haplochromis_burtoni
ENSHGLG00000008679RBFOX39894.865ENSHGLG00100014739RBFOX39894.865Heterocephalus_glaber_male
ENSHGLG00000008679RBFOX37979.167ENSHCOG00000001863RBFOX38581.250Hippocampus_comes
ENSHGLG00000008679RBFOX39664.957ENSHCOG00000007444RBFOX37863.687Hippocampus_comes
ENSHGLG00000008679RBFOX310062.637ENSIPUG00000021966rbfox3b8474.336Ictalurus_punctatus
ENSHGLG00000008679RBFOX39669.565ENSIPUG00000012010rbfox3a9069.209Ictalurus_punctatus
ENSHGLG00000008679RBFOX39895.628ENSSTOG00000026817RBFOX310093.043Ictidomys_tridecemlineatus
ENSHGLG00000008679RBFOX310096.032ENSJJAG00000014167Rbfox310096.032Jaculus_jaculus
ENSHGLG00000008679RBFOX310070.219ENSKMAG00000006726rbfox3b8168.750Kryptolebias_marmoratus
ENSHGLG00000008679RBFOX39670.739ENSLBEG00000022508-8170.170Labrus_bergylta
ENSHGLG00000008679RBFOX310070.789ENSLBEG00000004030rbfox3b9564.045Labrus_bergylta
ENSHGLG00000008679RBFOX39666.313ENSLACG00000018409-9363.702Latimeria_chalumnae
ENSHGLG00000008679RBFOX39673.011ENSLOCG00000012267rbfox3a9073.580Lepisosteus_oculatus
ENSHGLG00000008679RBFOX39893.239ENSLAFG00000016623RBFOX39894.309Loxodonta_africana
ENSHGLG00000008679RBFOX310096.429ENSMFAG00000002247RBFOX310096.429Macaca_fascicularis
ENSHGLG00000008679RBFOX310096.396ENSMMUG00000023028RBFOX310096.396Macaca_mulatta
ENSHGLG00000008679RBFOX310091.534ENSMNEG00000041147RBFOX310091.534Macaca_nemestrina
ENSHGLG00000008679RBFOX39790.741ENSMLEG00000025686RBFOX310084.066Mandrillus_leucophaeus
ENSHGLG00000008679RBFOX38380.080ENSMAMG00000019810rbfox3b9564.023Mastacembelus_armatus
ENSHGLG00000008679RBFOX39665.341ENSMAMG00000020600-9264.800Mastacembelus_armatus
ENSHGLG00000008679RBFOX310070.526ENSMZEG00005000781rbfox3b8269.399Maylandia_zebra
ENSHGLG00000008679RBFOX36565.185ENSMZEG00005003055-5488.800Maylandia_zebra
ENSHGLG00000008679RBFOX35390.625ENSMGAG00000005600RBFOX37390.625Meleagris_gallopavo
ENSHGLG00000008679RBFOX39693.681ENSMAUG00000013543Rbfox39693.681Mesocricetus_auratus
ENSHGLG00000008679RBFOX310095.238ENSMICG00000014898RBFOX39796.143Microcebus_murinus
ENSHGLG00000008679RBFOX310095.238ENSMOCG00000015373Rbfox310095.238Microtus_ochrogaster
ENSHGLG00000008679RBFOX310068.194ENSMMOG00000020193rbfox3b9161.266Mola_mola
ENSHGLG00000008679RBFOX39678.510ENSMODG00000002089RBFOX38379.656Monodelphis_domestica
ENSHGLG00000008679RBFOX310071.391ENSMALG00000018270-9264.607Monopterus_albus
ENSHGLG00000008679RBFOX310069.399ENSMALG00000020407rbfox3b8167.898Monopterus_albus
ENSHGLG00000008679RBFOX310095.238MGP_CAROLIEiJ_G0017487Rbfox310097.241Mus_caroli
ENSHGLG00000008679RBFOX39894.580ENSMUSG00000025576Rbfox310097.241Mus_musculus
ENSHGLG00000008679RBFOX310096.032MGP_PahariEiJ_G0018614Rbfox310097.931Mus_pahari
ENSHGLG00000008679RBFOX310095.503MGP_SPRETEiJ_G0018331Rbfox310097.241Mus_spretus
ENSHGLG00000008679RBFOX39875.616ENSMPUG00000012319RBFOX39276.355Mustela_putorius_furo
ENSHGLG00000008679RBFOX310095.503ENSNGAG00000018006Rbfox310095.503Nannospalax_galili
ENSHGLG00000008679RBFOX37793.333ENSNBRG00000022885-7893.333Neolamprologus_brichardi
ENSHGLG00000008679RBFOX310068.579ENSNBRG00000010102rbfox3b7492.593Neolamprologus_brichardi
ENSHGLG00000008679RBFOX360100.000ENSNLEG00000000153-82100.000Nomascus_leucogenys
ENSHGLG00000008679RBFOX39665.330ENSMEUG00000004218-9665.616Notamacropus_eugenii
ENSHGLG00000008679RBFOX36896.629ENSOPRG00000016279-7596.629Ochotona_princeps
ENSHGLG00000008679RBFOX310097.619ENSODEG00000009433RBFOX310097.619Octodon_degus
ENSHGLG00000008679RBFOX310070.300ENSONIG00000007282-8769.034Oreochromis_niloticus
ENSHGLG00000008679RBFOX310075.718ENSONIG00000009549rbfox3b9675.000Oreochromis_niloticus
ENSHGLG00000008679RBFOX38080.000ENSOCUG00000014217RBFOX38575.701Oryctolagus_cuniculus
ENSHGLG00000008679RBFOX310070.866ENSORLG00000000905rbfox3b6766.754Oryzias_latipes
ENSHGLG00000008679RBFOX310070.866ENSORLG00020018030rbfox3b8965.732Oryzias_latipes_hni
ENSHGLG00000008679RBFOX310069.755ENSORLG00015009200rbfox3b9175.897Oryzias_latipes_hsok
ENSHGLG00000008679RBFOX36675.194ENSOMEG00000014677rbfox3b7676.056Oryzias_melastigma
ENSHGLG00000008679RBFOX39681.375ENSOGAG00000029595RBFOX39077.577Otolemur_garnettii
ENSHGLG00000008679RBFOX36983.607ENSOARG00000002908RBFOX39257.143Ovis_aries
ENSHGLG00000008679RBFOX39396.154ENSPPAG00000025383RBFOX39793.891Pan_paniscus
ENSHGLG00000008679RBFOX310092.857ENSPPRG00000007819RBFOX310092.857Panthera_pardus
ENSHGLG00000008679RBFOX310096.825ENSPTRG00000009727RBFOX310096.825Pan_troglodytes
ENSHGLG00000008679RBFOX39790.741ENSPANG00000019837RBFOX310084.066Papio_anubis
ENSHGLG00000008679RBFOX39672.951ENSPKIG00000010299rbfox3a8565.535Paramormyrops_kingsleyae
ENSHGLG00000008679RBFOX310058.377ENSPKIG00000022633-8557.027Paramormyrops_kingsleyae
ENSHGLG00000008679RBFOX38669.524ENSPMGG00000008000rbfox3b7767.667Periophthalmus_magnuspinnatus
ENSHGLG00000008679RBFOX310095.503ENSPEMG00000010500Rbfox310095.503Peromyscus_maniculatus_bairdii
ENSHGLG00000008679RBFOX36462.451ENSPMAG00000008689rbfox3b9962.451Petromyzon_marinus
ENSHGLG00000008679RBFOX39692.264ENSPCIG00000005766RBFOX39692.550Phascolarctos_cinereus
ENSHGLG00000008679RBFOX310071.053ENSPFOG00000018294rbfox3b9269.136Poecilia_formosa
ENSHGLG00000008679RBFOX36585.792ENSPLAG00000000481rbfox3b7966.774Poecilia_latipinna
ENSHGLG00000008679RBFOX310067.761ENSPMEG00000022997rbfox3b9566.044Poecilia_mexicana
ENSHGLG00000008679RBFOX310070.572ENSPREG00000012886rbfox3b8669.034Poecilia_reticulata
ENSHGLG00000008679RBFOX310073.280ENSPPYG00000008704RBFOX39673.280Pongo_abelii
ENSHGLG00000008679RBFOX39689.971ENSPCAG00000001401RBFOX39691.117Procavia_capensis
ENSHGLG00000008679RBFOX310095.604ENSPCOG00000012689RBFOX310095.330Propithecus_coquereli
ENSHGLG00000008679RBFOX39685.673ENSPVAG00000015243RBFOX39686.819Pteropus_vampyrus
ENSHGLG00000008679RBFOX37392.593ENSPNYG00000010414rbfox3b7492.593Pundamilia_nyererei
ENSHGLG00000008679RBFOX37793.333ENSPNYG00000009079-7493.333Pundamilia_nyererei
ENSHGLG00000008679RBFOX38376.923ENSPNAG00000018173rbfox3b8558.307Pygocentrus_nattereri
ENSHGLG00000008679RBFOX39670.652ENSPNAG00000002889rbfox3a9363.272Pygocentrus_nattereri
ENSHGLG00000008679RBFOX310096.032ENSRNOG00000003386Rbfox310096.032Rattus_norvegicus
ENSHGLG00000008679RBFOX39791.049ENSRBIG00000040449RBFOX38590.741Rhinopithecus_bieti
ENSHGLG00000008679RBFOX39791.049ENSRROG00000000766RBFOX310084.341Rhinopithecus_roxellana
ENSHGLG00000008679RBFOX310096.032ENSSBOG00000031591RBFOX310096.032Saimiri_boliviensis_boliviensis
ENSHGLG00000008679RBFOX39577.358ENSSHAG00000016076RBFOX39577.673Sarcophilus_harrisii
ENSHGLG00000008679RBFOX39672.678ENSSFOG00015023260rbfox3a8970.093Scleropages_formosus
ENSHGLG00000008679RBFOX39658.239ENSSFOG00015004716RBFOX38955.625Scleropages_formosus
ENSHGLG00000008679RBFOX310067.758ENSSMAG00000012618rbfox3b7166.033Scophthalmus_maximus
ENSHGLG00000008679RBFOX310068.207ENSSMAG00000019052-9566.856Scophthalmus_maximus
ENSHGLG00000008679RBFOX39664.773ENSSDUG00000015801-8078.947Seriola_dumerili
ENSHGLG00000008679RBFOX310067.761ENSSDUG00000023183rbfox3b9566.044Seriola_dumerili
ENSHGLG00000008679RBFOX39666.193ENSSLDG00000016098-9065.600Seriola_lalandi_dorsalis
ENSHGLG00000008679RBFOX310070.219ENSSLDG00000000149rbfox3b8168.750Seriola_lalandi_dorsalis
ENSHGLG00000008679RBFOX39675.783ENSSPUG00000011733RBFOX39577.778Sphenodon_punctatus
ENSHGLG00000008679RBFOX38862.769ENSSPAG00000004898-7862.701Stegastes_partitus
ENSHGLG00000008679RBFOX38375.000ENSSPAG00000017571rbfox3b8060.112Stegastes_partitus
ENSHGLG00000008679RBFOX38895.509ENSSSCG00000039498RBFOX310095.509Sus_scrofa
ENSHGLG00000008679RBFOX310067.959ENSTRUG00000004894rbfox3b9065.946Takifugu_rubripes
ENSHGLG00000008679RBFOX310063.409ENSTNIG00000011278rbfox3b9259.670Tetraodon_nigroviridis
ENSHGLG00000008679RBFOX39662.810ENSTBEG00000004296-9662.810Tupaia_belangeri
ENSHGLG00000008679RBFOX39688.252ENSTTRG00000003676RBFOX39689.398Tursiops_truncatus
ENSHGLG00000008679RBFOX39881.408ENSUAMG00000004668RBFOX39781.972Ursus_americanus
ENSHGLG00000008679RBFOX310096.154ENSVVUG00000017864RBFOX38996.154Vulpes_vulpes
ENSHGLG00000008679RBFOX310062.466ENSXETG00000020236rbfox39159.288Xenopus_tropicalis
ENSHGLG00000008679RBFOX310068.937ENSXCOG00000018262rbfox3b9563.636Xiphophorus_couchianus
ENSHGLG00000008679RBFOX310071.053ENSXMAG00000012939rbfox3b9163.205Xiphophorus_maculatus

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