EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000008740 (Gene tree)
Gene ID: -
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 11210 bases
Position: chrJH602091.1:13896447-13907656
Accession: 101724111
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000012225	MBD	PF01429.19	5.8e-16	1	1
ENSHGLP00000012224	MBD	PF01429.19	6.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000012358	-	2198	XM_013075943	ENSHGLP00000012224	630 (aa)	XP_012931397	A0A0N8ETA3
ENSHGLT00000012359	-	2123	XM_013075947	ENSHGLP00000012225	605 (aa)	XP_012931401	UPI00034F646B

Gene Model

Click here to download ENSHGLG00000008740's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000008740's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000008740	MBD1	100	85.785	ENSG00000141644	MBD1	99	93.893	Homo_sapiens
ENSHGLG00000008740	MBD1	100	84.177	ENSAMEG00000000238	MBD1	96	84.494	Ailuropoda_melanoleuca
ENSHGLG00000008740	MBD1	62	33.990	ENSAOCG00000020272	mbd1b	51	35.000	Amphiprion_ocellaris
ENSHGLG00000008740	MBD1	65	43.341	ENSACAG00000006091	-	100	41.505	Anolis_carolinensis
ENSHGLG00000008740	MBD1	100	85.238	ENSANAG00000036253	MBD1	100	85.238	Aotus_nancymaae
ENSHGLG00000008740	MBD1	100	83.835	ENSBTAG00000003801	MBD1	100	83.835	Bos_taurus
ENSHGLG00000008740	MBD1	99	85.403	ENSCJAG00000004959	MBD1	100	83.801	Callithrix_jacchus
ENSHGLG00000008740	MBD1	100	83.360	ENSCAFG00000018928	MBD1	96	83.994	Canis_familiaris
ENSHGLG00000008740	MBD1	99	82.825	ENSCAFG00020024272	MBD1	97	83.467	Canis_lupus_dingo
ENSHGLG00000008740	MBD1	100	83.677	ENSCHIG00000021134	MBD1	100	83.677	Capra_hircus
ENSHGLG00000008740	MBD1	100	83.810	ENSTSYG00000000509	MBD1	100	83.810	Carlito_syrichta
ENSHGLG00000008740	MBD1	98	69.833	ENSCAPG00000015782	MBD1	96	69.333	Cavia_aperea
ENSHGLG00000008740	MBD1	100	81.709	ENSCPOG00000001671	MBD1	100	80.374	Cavia_porcellus
ENSHGLG00000008740	MBD1	100	83.630	ENSCCAG00000034600	MBD1	91	84.060	Cebus_capucinus
ENSHGLG00000008740	MBD1	100	85.950	ENSCATG00000029959	MBD1	100	85.950	Cercocebus_atys
ENSHGLG00000008740	MBD1	100	93.810	ENSCLAG00000007457	MBD1	89	93.810	Chinchilla_lanigera
ENSHGLG00000008740	MBD1	100	85.950	ENSCSAG00000018070	MBD1	100	85.950	Chlorocebus_sabaeus
ENSHGLG00000008740	MBD1	100	85.620	ENSCANG00000033425	MBD1	100	85.620	Colobus_angolensis_palliatus
ENSHGLG00000008740	MBD1	100	77.011	ENSCGRG00001014843	Mbd1	100	76.026	Cricetulus_griseus_chok1gshd
ENSHGLG00000008740	MBD1	98	57.512	ENSCGRG00000014135	Mbd1	96	59.933	Cricetulus_griseus_crigri
ENSHGLG00000008740	MBD1	100	77.971	ENSDNOG00000015998	MBD1	100	80.190	Dasypus_novemcinctus
ENSHGLG00000008740	MBD1	98	70.034	ENSDORG00000013917	Mbd1	96	79.245	Dipodomys_ordii
ENSHGLG00000008740	MBD1	100	85.601	ENSEASG00005003857	MBD1	100	85.601	Equus_asinus_asinus
ENSHGLG00000008740	MBD1	100	85.173	ENSECAG00000011497	MBD1	80	85.173	Equus_caballus
ENSHGLG00000008740	MBD1	100	84.019	ENSFCAG00000015730	MBD1	100	84.335	Felis_catus
ENSHGLG00000008740	MBD1	90	93.868	ENSFDAG00000011085	MBD1	95	78.317	Fukomys_damarensis
ENSHGLG00000008740	MBD1	64	31.421	ENSFHEG00000020120	mbd1b	51	30.787	Fundulus_heteroclitus
ENSHGLG00000008740	MBD1	100	85.620	ENSGGOG00000016966	MBD1	100	85.620	Gorilla_gorilla
ENSHGLG00000008740	MBD1	93	99.682	ENSHGLG00100005198	MBD1	100	99.682	Heterocephalus_glaber_male
ENSHGLG00000008740	MBD1	100	85.528	ENSSTOG00000007780	MBD1	100	85.691	Ictidomys_tridecemlineatus
ENSHGLG00000008740	MBD1	98	69.514	ENSJJAG00000022859	Mbd1	96	69.012	Jaculus_jaculus
ENSHGLG00000008740	MBD1	65	39.903	ENSLACG00000002414	-	52	64.062	Latimeria_chalumnae
ENSHGLG00000008740	MBD1	99	73.466	ENSLAFG00000031328	MBD1	97	73.466	Loxodonta_africana
ENSHGLG00000008740	MBD1	100	85.950	ENSMFAG00000026335	MBD1	100	85.950	Macaca_fascicularis
ENSHGLG00000008740	MBD1	100	85.873	ENSMMUG00000009050	MBD1	100	85.873	Macaca_mulatta
ENSHGLG00000008740	MBD1	100	85.950	ENSMNEG00000038822	MBD1	100	85.950	Macaca_nemestrina
ENSHGLG00000008740	MBD1	100	85.950	ENSMLEG00000043121	MBD1	100	85.950	Mandrillus_leucophaeus
ENSHGLG00000008740	MBD1	100	84.878	ENSMICG00000006414	MBD1	100	83.556	Microcebus_murinus
ENSHGLG00000008740	MBD1	66	42.689	ENSMODG00000001286	-	58	41.422	Monodelphis_domestica
ENSHGLG00000008740	MBD1	98	68.750	ENSMUSG00000024561	Mbd1	96	68.590	Mus_musculus
ENSHGLG00000008740	MBD1	100	68.362	MGP_PahariEiJ_G0019128	Mbd1	100	68.680	Mus_pahari
ENSHGLG00000008740	MBD1	98	69.968	MGP_SPRETEiJ_G0023304	Mbd1	99	69.805	Mus_spretus
ENSHGLG00000008740	MBD1	100	83.861	ENSMPUG00000008843	MBD1	96	84.177	Mustela_putorius_furo
ENSHGLG00000008740	MBD1	100	83.333	ENSMLUG00000008286	MBD1	96	83.333	Myotis_lucifugus
ENSHGLG00000008740	MBD1	98	66.942	ENSNGAG00000011412	Mbd1	96	66.942	Nannospalax_galili
ENSHGLG00000008740	MBD1	100	85.455	ENSNLEG00000011661	-	100	85.455	Nomascus_leucogenys
ENSHGLG00000008740	MBD1	99	67.450	ENSNLEG00000032711	-	90	67.282	Nomascus_leucogenys
ENSHGLG00000008740	MBD1	100	74.050	ENSOPRG00000007647	MBD1	100	74.050	Ochotona_princeps
ENSHGLG00000008740	MBD1	98	80.034	ENSODEG00000018451	MBD1	96	80.034	Octodon_degus
ENSHGLG00000008740	MBD1	85	45.656	ENSOANG00000014593	-	100	46.241	Ornithorhynchus_anatinus
ENSHGLG00000008740	MBD1	100	82.726	ENSOCUG00000006554	MBD1	100	83.677	Oryctolagus_cuniculus
ENSHGLG00000008740	MBD1	100	82.812	ENSOGAG00000003784	MBD1	96	82.500	Otolemur_garnettii
ENSHGLG00000008740	MBD1	100	83.386	ENSOARG00000004218	MBD1	95	83.386	Ovis_aries
ENSHGLG00000008740	MBD1	100	85.950	ENSPPAG00000038886	MBD1	100	85.950	Pan_paniscus
ENSHGLG00000008740	MBD1	100	84.177	ENSPPRG00000021387	MBD1	100	84.494	Panthera_pardus
ENSHGLG00000008740	MBD1	100	84.335	ENSPTIG00000021231	MBD1	100	84.652	Panthera_tigris_altaica
ENSHGLG00000008740	MBD1	100	85.950	ENSPTRG00000010021	MBD1	100	85.950	Pan_troglodytes
ENSHGLG00000008740	MBD1	100	85.714	ENSPANG00000010867	MBD1	100	85.714	Papio_anubis
ENSHGLG00000008740	MBD1	98	61.827	ENSPEMG00000022630	Mbd1	96	61.765	Peromyscus_maniculatus_bairdii
ENSHGLG00000008740	MBD1	96	46.711	ENSPCIG00000027937	-	79	46.434	Phascolarctos_cinereus
ENSHGLG00000008740	MBD1	100	85.950	ENSPPYG00000009158	MBD1	91	85.950	Pongo_abelii
ENSHGLG00000008740	MBD1	99	73.884	ENSPCAG00000001648	MBD1	99	73.884	Procavia_capensis
ENSHGLG00000008740	MBD1	100	87.294	ENSPCOG00000012450	MBD1	100	87.294	Propithecus_coquereli
ENSHGLG00000008740	MBD1	98	51.870	ENSRNOG00000024104	Mbd1	96	52.537	Rattus_norvegicus
ENSHGLG00000008740	MBD1	100	79.048	ENSRBIG00000041294	MBD1	100	79.048	Rhinopithecus_bieti
ENSHGLG00000008740	MBD1	100	85.455	ENSRROG00000032517	MBD1	100	85.455	Rhinopithecus_roxellana
ENSHGLG00000008740	MBD1	99	86.074	ENSSBOG00000027169	MBD1	91	86.074	Saimiri_boliviensis_boliviensis
ENSHGLG00000008740	MBD1	76	44.850	ENSSHAG00000003661	-	100	44.850	Sarcophilus_harrisii
ENSHGLG00000008740	MBD1	100	81.983	ENSSSCG00000004516	MBD1	100	81.983	Sus_scrofa
ENSHGLG00000008740	MBD1	67	31.090	ENSTRUG00000013422	mbd1b	52	34.685	Takifugu_rubripes
ENSHGLG00000008740	MBD1	68	82.427	ENSTBEG00000012651	-	68	82.427	Tupaia_belangeri
ENSHGLG00000008740	MBD1	100	80.231	ENSTTRG00000015523	MBD1	100	80.725	Tursiops_truncatus
ENSHGLG00000008740	MBD1	100	80.033	ENSUAMG00000004752	MBD1	100	80.890	Ursus_americanus
ENSHGLG00000008740	MBD1	100	83.526	ENSUMAG00000002947	MBD1	100	83.855	Ursus_maritimus