EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000008955 (Gene tree)
Gene ID: -
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 111104 bases
Position: chrJH602104.1:12757319-12868422
Accession: 101709076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000012525	DND1_DSRM	PF14709.7	1.1e-24	1	1
ENSHGLP00000012525	RRM_1	PF00076.22	3.1e-38	1	3
ENSHGLP00000012525	RRM_1	PF00076.22	3.1e-38	2	3
ENSHGLP00000012525	RRM_1	PF00076.22	3.1e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000012661	-	3672	XM_004858325	ENSHGLP00000012525	595 (aa)	XP_004858382	A0A0P6JGP4

Gene Model

Click here to download ENSHGLG00000008955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000008955's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000008955	A1CF	62	49.596	ENSHGLG00000016914	RBM47	89	68.085
ENSHGLG00000008955	A1CF	53	51.899	ENSHGLG00000013025	HNRNPR	50	51.899
ENSHGLG00000008955	A1CF	51	47.573	ENSHGLG00000002189	-	56	46.769
ENSHGLG00000008955	A1CF	52	50.485	ENSHGLG00000013273	-	59	50.318
ENSHGLG00000008955	A1CF	84	69.453	ENSHGLG00000002463	-	99	69.108
ENSHGLG00000008955	A1CF	88	59.486	ENSHGLG00000002940	-	88	59.486
ENSHGLG00000008955	A1CF	83	60.390	ENSHGLG00000010742	-	86	60.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000008955	A1CF	100	96.134	ENSG00000148584	A1CF	100	98.507	Homo_sapiens
ENSHGLG00000008955	A1CF	100	72.803	ENSAPOG00000008259	a1cf	100	72.637	Acanthochromis_polyacanthus
ENSHGLG00000008955	A1CF	100	94.118	ENSAMEG00000000523	A1CF	100	94.622	Ailuropoda_melanoleuca
ENSHGLG00000008955	A1CF	100	74.878	ENSACIG00000008632	a1cf	100	76.020	Amphilophus_citrinellus
ENSHGLG00000008955	A1CF	100	73.486	ENSAOCG00000023744	a1cf	96	83.478	Amphiprion_ocellaris
ENSHGLG00000008955	A1CF	100	74.468	ENSAPEG00000009537	a1cf	100	74.959	Amphiprion_percula
ENSHGLG00000008955	A1CF	100	75.081	ENSATEG00000013720	a1cf	100	76.547	Anabas_testudineus
ENSHGLG00000008955	A1CF	100	88.591	ENSAPLG00000002964	A1CF	100	88.591	Anas_platyrhynchos
ENSHGLG00000008955	A1CF	100	82.718	ENSACAG00000015269	A1CF	100	82.718	Anolis_carolinensis
ENSHGLG00000008955	A1CF	100	94.958	ENSANAG00000019974	A1CF	100	94.958	Aotus_nancymaae
ENSHGLG00000008955	A1CF	100	72.386	ENSACLG00000017428	a1cf	100	73.693	Astatotilapia_calliptera
ENSHGLG00000008955	A1CF	100	73.719	ENSAMXG00000018180	a1cf	100	73.719	Astyanax_mexicanus
ENSHGLG00000008955	A1CF	100	94.286	ENSBTAG00000021195	A1CF	100	94.689	Bos_taurus
ENSHGLG00000008955	A1CF	100	96.471	ENSCJAG00000005045	A1CF	100	96.471	Callithrix_jacchus
ENSHGLG00000008955	A1CF	100	93.613	ENSCAFG00000015581	A1CF	100	94.118	Canis_familiaris
ENSHGLG00000008955	A1CF	100	93.613	ENSCAFG00020026421	A1CF	100	94.118	Canis_lupus_dingo
ENSHGLG00000008955	A1CF	100	94.790	ENSCHIG00000020411	A1CF	100	94.790	Capra_hircus
ENSHGLG00000008955	A1CF	95	94.504	ENSTSYG00000001755	A1CF	100	93.772	Carlito_syrichta
ENSHGLG00000008955	A1CF	100	82.515	ENSCAPG00000017386	A1CF	100	82.515	Cavia_aperea
ENSHGLG00000008955	A1CF	100	97.143	ENSCPOG00000009807	A1CF	100	97.143	Cavia_porcellus
ENSHGLG00000008955	A1CF	100	96.134	ENSCCAG00000018168	A1CF	100	96.134	Cebus_capucinus
ENSHGLG00000008955	A1CF	100	94.454	ENSCATG00000043715	A1CF	100	94.790	Cercocebus_atys
ENSHGLG00000008955	A1CF	100	97.148	ENSCLAG00000010424	A1CF	100	97.148	Chinchilla_lanigera
ENSHGLG00000008955	A1CF	100	96.303	ENSCSAG00000007032	A1CF	100	96.303	Chlorocebus_sabaeus
ENSHGLG00000008955	A1CF	98	88.983	ENSCHOG00000009089	A1CF	98	88.983	Choloepus_hoffmanni
ENSHGLG00000008955	A1CF	100	88.087	ENSCPBG00000026464	A1CF	100	87.752	Chrysemys_picta_bellii
ENSHGLG00000008955	A1CF	100	96.303	ENSCANG00000038032	A1CF	100	96.303	Colobus_angolensis_palliatus
ENSHGLG00000008955	A1CF	100	93.613	ENSCGRG00001017413	A1cf	100	93.613	Cricetulus_griseus_chok1gshd
ENSHGLG00000008955	A1CF	100	92.941	ENSCGRG00000017332	A1cf	100	92.941	Cricetulus_griseus_crigri
ENSHGLG00000008955	A1CF	100	74.461	ENSCSEG00000002361	a1cf	100	76.119	Cynoglossus_semilaevis
ENSHGLG00000008955	A1CF	100	73.453	ENSCVAG00000010520	a1cf	100	75.570	Cyprinodon_variegatus
ENSHGLG00000008955	A1CF	100	77.704	ENSDARG00000002968	a1cf	100	78.869	Danio_rerio
ENSHGLG00000008955	A1CF	100	94.790	ENSDNOG00000002829	A1CF	100	94.790	Dasypus_novemcinctus
ENSHGLG00000008955	A1CF	81	91.304	ENSETEG00000012527	A1CF	81	91.304	Echinops_telfairi
ENSHGLG00000008955	A1CF	100	95.310	ENSEASG00005012924	A1CF	100	94.975	Equus_asinus_asinus
ENSHGLG00000008955	A1CF	100	94.807	ENSECAG00000010424	A1CF	100	94.472	Equus_caballus
ENSHGLG00000008955	A1CF	78	79.872	ENSEEUG00000000013	A1CF	99	77.131	Erinaceus_europaeus
ENSHGLG00000008955	A1CF	100	78.203	ENSELUG00000003159	a1cf	100	78.869	Esox_lucius
ENSHGLG00000008955	A1CF	100	91.261	ENSFCAG00000011179	A1CF	100	91.933	Felis_catus
ENSHGLG00000008955	A1CF	100	85.906	ENSFALG00000013183	A1CF	100	85.906	Ficedula_albicollis
ENSHGLG00000008955	A1CF	100	96.471	ENSFDAG00000019371	A1CF	100	96.471	Fukomys_damarensis
ENSHGLG00000008955	A1CF	100	68.730	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSHGLG00000008955	A1CF	100	71.287	ENSGMOG00000018943	a1cf	100	71.122	Gadus_morhua
ENSHGLG00000008955	A1CF	95	87.788	ENSGALG00000003765	A1CF	97	87.788	Gallus_gallus
ENSHGLG00000008955	A1CF	100	70.066	ENSGAFG00000014868	a1cf	100	71.217	Gambusia_affinis
ENSHGLG00000008955	A1CF	100	74.013	ENSGACG00000010241	a1cf	100	74.342	Gasterosteus_aculeatus
ENSHGLG00000008955	A1CF	94	87.922	ENSGAGG00000016508	A1CF	97	87.567	Gopherus_agassizii
ENSHGLG00000008955	A1CF	100	96.134	ENSGGOG00000009670	A1CF	100	96.134	Gorilla_gorilla
ENSHGLG00000008955	A1CF	100	73.736	ENSHBUG00000021959	a1cf	100	75.367	Haplochromis_burtoni
ENSHGLG00000008955	A1CF	100	99.328	ENSHGLG00100000518	A1CF	100	99.328	Heterocephalus_glaber_male
ENSHGLG00000008955	A1CF	95	71.134	ENSHCOG00000017669	a1cf	100	71.870	Hippocampus_comes
ENSHGLG00000008955	A1CF	89	82.463	ENSIPUG00000010367	a1cf	95	83.208	Ictalurus_punctatus
ENSHGLG00000008955	A1CF	100	77.236	ENSKMAG00000006568	a1cf	100	76.748	Kryptolebias_marmoratus
ENSHGLG00000008955	A1CF	99	74.715	ENSLBEG00000020994	a1cf	98	76.190	Labrus_bergylta
ENSHGLG00000008955	A1CF	100	80.968	ENSLACG00000008061	A1CF	100	80.467	Latimeria_chalumnae
ENSHGLG00000008955	A1CF	100	81.000	ENSLOCG00000006302	a1cf	100	81.000	Lepisosteus_oculatus
ENSHGLG00000008955	A1CF	100	93.950	ENSLAFG00000015462	A1CF	100	93.950	Loxodonta_africana
ENSHGLG00000008955	A1CF	100	94.790	ENSMFAG00000035948	A1CF	100	95.126	Macaca_fascicularis
ENSHGLG00000008955	A1CF	100	94.790	ENSMMUG00000007077	A1CF	100	95.126	Macaca_mulatta
ENSHGLG00000008955	A1CF	100	94.454	ENSMNEG00000031454	A1CF	100	94.790	Macaca_nemestrina
ENSHGLG00000008955	A1CF	100	96.134	ENSMLEG00000037223	A1CF	100	96.134	Mandrillus_leucophaeus
ENSHGLG00000008955	A1CF	100	73.159	ENSMAMG00000010402	a1cf	100	74.183	Mastacembelus_armatus
ENSHGLG00000008955	A1CF	100	75.208	ENSMZEG00005013245	a1cf	100	75.833	Maylandia_zebra
ENSHGLG00000008955	A1CF	100	87.940	ENSMGAG00000001507	A1CF	100	87.940	Meleagris_gallopavo
ENSHGLG00000008955	A1CF	100	93.445	ENSMAUG00000007422	A1cf	100	93.445	Mesocricetus_auratus
ENSHGLG00000008955	A1CF	100	92.977	ENSMICG00000003377	A1CF	100	92.977	Microcebus_murinus
ENSHGLG00000008955	A1CF	100	93.277	ENSMOCG00000021536	A1cf	100	93.277	Microtus_ochrogaster
ENSHGLG00000008955	A1CF	100	67.430	ENSMMOG00000009422	a1cf	100	68.740	Mola_mola
ENSHGLG00000008955	A1CF	92	89.214	ENSMODG00000016478	A1CF	96	91.065	Monodelphis_domestica
ENSHGLG00000008955	A1CF	100	71.833	ENSMALG00000012992	a1cf	100	71.167	Monopterus_albus
ENSHGLG00000008955	A1CF	100	93.277	MGP_CAROLIEiJ_G0022873	A1cf	100	93.277	Mus_caroli
ENSHGLG00000008955	A1CF	100	93.277	ENSMUSG00000052595	A1cf	99	95.000	Mus_musculus
ENSHGLG00000008955	A1CF	100	92.437	MGP_PahariEiJ_G0014366	A1cf	100	92.437	Mus_pahari
ENSHGLG00000008955	A1CF	100	92.773	MGP_SPRETEiJ_G0023792	A1cf	100	92.773	Mus_spretus
ENSHGLG00000008955	A1CF	100	88.908	ENSMPUG00000016971	A1CF	100	89.076	Mustela_putorius_furo
ENSHGLG00000008955	A1CF	100	93.950	ENSMLUG00000016071	A1CF	100	93.950	Myotis_lucifugus
ENSHGLG00000008955	A1CF	100	94.790	ENSNGAG00000015136	A1cf	100	94.790	Nannospalax_galili
ENSHGLG00000008955	A1CF	100	74.062	ENSNBRG00000001712	a1cf	100	75.693	Neolamprologus_brichardi
ENSHGLG00000008955	A1CF	100	96.975	ENSNLEG00000012028	A1CF	100	96.975	Nomascus_leucogenys
ENSHGLG00000008955	A1CF	94	88.632	ENSMEUG00000015909	A1CF	100	89.165	Notamacropus_eugenii
ENSHGLG00000008955	A1CF	88	84.762	ENSOPRG00000010667	A1CF	96	84.762	Ochotona_princeps
ENSHGLG00000008955	A1CF	100	74.715	ENSONIG00000019105	a1cf	100	75.530	Oreochromis_niloticus
ENSHGLG00000008955	A1CF	78	88.651	ENSOANG00000007360	A1CF	99	88.651	Ornithorhynchus_anatinus
ENSHGLG00000008955	A1CF	100	92.450	ENSOCUG00000011587	A1CF	100	92.617	Oryctolagus_cuniculus
ENSHGLG00000008955	A1CF	100	74.183	ENSORLG00000013342	a1cf	100	73.786	Oryzias_latipes
ENSHGLG00000008955	A1CF	100	75.530	ENSORLG00020000586	a1cf	100	75.204	Oryzias_latipes_hni
ENSHGLG00000008955	A1CF	100	75.244	ENSORLG00015018569	a1cf	100	74.919	Oryzias_latipes_hsok
ENSHGLG00000008955	A1CF	100	74.468	ENSOMEG00000013531	a1cf	100	74.468	Oryzias_melastigma
ENSHGLG00000008955	A1CF	100	93.613	ENSOGAG00000012884	A1CF	100	94.286	Otolemur_garnettii
ENSHGLG00000008955	A1CF	100	94.790	ENSOARG00000013695	A1CF	100	94.790	Ovis_aries
ENSHGLG00000008955	A1CF	97	94.107	ENSPPAG00000028115	A1CF	100	97.571	Pan_paniscus
ENSHGLG00000008955	A1CF	100	92.941	ENSPPRG00000012180	A1CF	100	93.613	Panthera_pardus
ENSHGLG00000008955	A1CF	100	92.941	ENSPTIG00000021223	A1CF	100	93.613	Panthera_tigris_altaica
ENSHGLG00000008955	A1CF	100	96.303	ENSPTRG00000002508	A1CF	100	96.303	Pan_troglodytes
ENSHGLG00000008955	A1CF	100	94.790	ENSPANG00000021988	A1CF	100	95.126	Papio_anubis
ENSHGLG00000008955	A1CF	100	80.033	ENSPKIG00000025176	a1cf	100	79.700	Paramormyrops_kingsleyae
ENSHGLG00000008955	A1CF	100	86.242	ENSPSIG00000010318	A1CF	100	86.242	Pelodiscus_sinensis
ENSHGLG00000008955	A1CF	88	71.048	ENSPMGG00000013359	a1cf	99	67.406	Periophthalmus_magnuspinnatus
ENSHGLG00000008955	A1CF	100	94.118	ENSPEMG00000015021	A1cf	100	94.118	Peromyscus_maniculatus_bairdii
ENSHGLG00000008955	A1CF	100	88.591	ENSPCIG00000002175	A1CF	100	89.094	Phascolarctos_cinereus
ENSHGLG00000008955	A1CF	100	75.407	ENSPFOG00000007437	-	100	77.362	Poecilia_formosa
ENSHGLG00000008955	A1CF	100	75.570	ENSPFOG00000006683	a1cf	100	77.524	Poecilia_formosa
ENSHGLG00000008955	A1CF	100	74.267	ENSPLAG00000000026	a1cf	100	76.221	Poecilia_latipinna
ENSHGLG00000008955	A1CF	100	74.267	ENSPLAG00000001210	-	100	76.221	Poecilia_latipinna
ENSHGLG00000008955	A1CF	100	66.993	ENSPMEG00000000921	a1cf	100	68.954	Poecilia_mexicana
ENSHGLG00000008955	A1CF	100	68.137	ENSPMEG00000015529	-	100	70.098	Poecilia_mexicana
ENSHGLG00000008955	A1CF	100	75.244	ENSPREG00000016298	a1cf	100	77.362	Poecilia_reticulata
ENSHGLG00000008955	A1CF	100	95.462	ENSPPYG00000002819	A1CF	100	95.462	Pongo_abelii
ENSHGLG00000008955	A1CF	79	73.362	ENSPCAG00000006463	A1CF	70	91.837	Procavia_capensis
ENSHGLG00000008955	A1CF	100	94.631	ENSPCOG00000024172	A1CF	100	94.631	Propithecus_coquereli
ENSHGLG00000008955	A1CF	100	75.041	ENSPNYG00000017944	a1cf	100	76.672	Pundamilia_nyererei
ENSHGLG00000008955	A1CF	100	78.974	ENSPNAG00000007704	a1cf	100	78.642	Pygocentrus_nattereri
ENSHGLG00000008955	A1CF	100	92.101	ENSRNOG00000033195	A1cf	100	92.101	Rattus_norvegicus
ENSHGLG00000008955	A1CF	100	89.447	ENSRBIG00000042892	A1CF	100	93.151	Rhinopithecus_bieti
ENSHGLG00000008955	A1CF	100	96.471	ENSRROG00000041398	A1CF	100	96.471	Rhinopithecus_roxellana
ENSHGLG00000008955	A1CF	100	96.303	ENSSBOG00000021930	A1CF	100	96.303	Saimiri_boliviensis_boliviensis
ENSHGLG00000008955	A1CF	100	88.926	ENSSHAG00000005096	A1CF	100	89.094	Sarcophilus_harrisii
ENSHGLG00000008955	A1CF	100	78.607	ENSSFOG00015011774	a1cf	100	78.773	Scleropages_formosus
ENSHGLG00000008955	A1CF	100	74.919	ENSSMAG00000013271	a1cf	100	75.244	Scophthalmus_maximus
ENSHGLG00000008955	A1CF	100	75.456	ENSSDUG00000013930	a1cf	100	76.451	Seriola_dumerili
ENSHGLG00000008955	A1CF	100	69.472	ENSSLDG00000004290	a1cf	100	69.142	Seriola_lalandi_dorsalis
ENSHGLG00000008955	A1CF	95	83.392	ENSSARG00000005940	A1CF	96	83.392	Sorex_araneus
ENSHGLG00000008955	A1CF	95	87.698	ENSSPUG00000006797	A1CF	95	86.819	Sphenodon_punctatus
ENSHGLG00000008955	A1CF	100	94.958	ENSSSCG00000010431	A1CF	100	94.958	Sus_scrofa
ENSHGLG00000008955	A1CF	100	87.793	ENSTGUG00000005090	A1CF	100	87.458	Taeniopygia_guttata
ENSHGLG00000008955	A1CF	100	74.225	ENSTRUG00000001982	a1cf	100	73.736	Takifugu_rubripes
ENSHGLG00000008955	A1CF	100	74.634	ENSTNIG00000003580	a1cf	100	74.309	Tetraodon_nigroviridis
ENSHGLG00000008955	A1CF	97	87.175	ENSTTRG00000013190	A1CF	95	87.175	Tursiops_truncatus
ENSHGLG00000008955	A1CF	100	92.941	ENSUAMG00000020065	A1CF	100	93.277	Ursus_americanus
ENSHGLG00000008955	A1CF	100	93.782	ENSUMAG00000011162	A1CF	100	94.118	Ursus_maritimus
ENSHGLG00000008955	A1CF	87	88.484	ENSVPAG00000006130	A1CF	86	88.484	Vicugna_pacos
ENSHGLG00000008955	A1CF	100	92.269	ENSVVUG00000002504	A1CF	100	92.605	Vulpes_vulpes
ENSHGLG00000008955	A1CF	100	77.333	ENSXETG00000006611	a1cf	100	77.333	Xenopus_tropicalis
ENSHGLG00000008955	A1CF	100	76.393	ENSXCOG00000003302	a1cf	100	77.213	Xiphophorus_couchianus
ENSHGLG00000008955	A1CF	100	77.541	ENSXMAG00000016703	a1cf	100	78.361	Xiphophorus_maculatus