EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000009034 (Gene tree)
Gene ID: -
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 11392 bases
Position: chrJH602185.1:451118-462509
Accession: 101724783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000012639	MBD	PF01429.19	9.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000012776	MBD4-201	4538	XM_004870451	ENSHGLP00000012639	567 (aa)	XP_004870508	UPI0003500964
ENSHGLT00000012777	MBD4-202	534	-	ENSHGLP00000012640	177 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000009034's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000009034's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000009034	MBD4	99	73.205	ENSG00000129071	MBD4	97	92.778	Homo_sapiens
ENSHGLG00000009034	MBD4	62	51.863	ENSAPOG00000021668	mbd4	77	51.863	Acanthochromis_polyacanthus
ENSHGLG00000009034	MBD4	100	70.681	ENSAMEG00000004562	MBD4	99	70.681	Ailuropoda_melanoleuca
ENSHGLG00000009034	MBD4	69	50.877	ENSAOCG00000001157	mbd4	85	50.877	Amphiprion_ocellaris
ENSHGLG00000009034	MBD4	87	41.732	ENSATEG00000014594	MBD4	87	41.732	Anabas_testudineus
ENSHGLG00000009034	MBD4	69	79.769	ENSACAG00000014733	MBD4	69	79.769	Anolis_carolinensis
ENSHGLG00000009034	MBD4	100	65.794	ENSBTAG00000021645	MBD4	100	65.794	Bos_taurus
ENSHGLG00000009034	MBD4	100	70.332	ENSCJAG00000017293	MBD4	99	70.332	Callithrix_jacchus
ENSHGLG00000009034	MBD4	100	69.913	ENSCAFG00000004867	MBD4	99	69.913	Canis_familiaris
ENSHGLG00000009034	MBD4	100	69.913	ENSCAFG00020007082	MBD4	99	69.913	Canis_lupus_dingo
ENSHGLG00000009034	MBD4	100	65.157	ENSCHIG00000009760	MBD4	100	65.157	Capra_hircus
ENSHGLG00000009034	MBD4	98	71.813	ENSCCAG00000029796	MBD4	96	71.813	Cebus_capucinus
ENSHGLG00000009034	MBD4	98	72.711	ENSCATG00000035211	MBD4	98	71.831	Cercocebus_atys
ENSHGLG00000009034	MBD4	100	82.570	ENSCLAG00000008974	MBD4	100	82.570	Chinchilla_lanigera
ENSHGLG00000009034	MBD4	98	72.531	ENSCSAG00000009037	MBD4	96	72.531	Chlorocebus_sabaeus
ENSHGLG00000009034	MBD4	88	49.618	ENSCPBG00000014704	MBD4	90	49.618	Chrysemys_picta_bellii
ENSHGLG00000009034	MBD4	98	73.250	ENSCANG00000007120	MBD4	96	73.250	Colobus_angolensis_palliatus
ENSHGLG00000009034	MBD4	100	65.324	ENSCGRG00001003507	Mbd4	100	65.499	Cricetulus_griseus_chok1gshd
ENSHGLG00000009034	MBD4	100	65.324	ENSCGRG00000010974	Mbd4	100	65.499	Cricetulus_griseus_crigri
ENSHGLG00000009034	MBD4	100	68.182	ENSDNOG00000049619	MBD4	100	68.182	Dasypus_novemcinctus
ENSHGLG00000009034	MBD4	79	62.000	ENSDORG00000000902	-	92	62.000	Dipodomys_ordii
ENSHGLG00000009034	MBD4	100	73.345	ENSEASG00005014800	MBD4	100	73.345	Equus_asinus_asinus
ENSHGLG00000009034	MBD4	100	72.822	ENSECAG00000022106	MBD4	100	72.822	Equus_caballus
ENSHGLG00000009034	MBD4	92	63.027	ENSEEUG00000011459	MBD4	96	63.027	Erinaceus_europaeus
ENSHGLG00000009034	MBD4	100	71.379	ENSFCAG00000000083	MBD4	99	71.379	Felis_catus
ENSHGLG00000009034	MBD4	83	41.372	ENSFALG00000013663	MBD4	99	41.365	Ficedula_albicollis
ENSHGLG00000009034	MBD4	54	58.039	ENSGMOG00000013830	mbd4	64	58.039	Gadus_morhua
ENSHGLG00000009034	MBD4	89	49.618	ENSGAGG00000018644	MBD4	91	49.618	Gopherus_agassizii
ENSHGLG00000009034	MBD4	98	73.118	ENSGGOG00000010698	MBD4	98	72.232	Gorilla_gorilla
ENSHGLG00000009034	MBD4	100	99.824	ENSHGLG00100000135	MBD4	100	99.824	Heterocephalus_glaber_male
ENSHGLG00000009034	MBD4	100	69.512	ENSSTOG00000020663	MBD4	100	69.512	Ictidomys_tridecemlineatus
ENSHGLG00000009034	MBD4	95	70.718	ENSLAFG00000010609	MBD4	94	70.718	Loxodonta_africana
ENSHGLG00000009034	MBD4	99	71.831	ENSMFAG00000002266	MBD4	98	71.831	Macaca_fascicularis
ENSHGLG00000009034	MBD4	99	71.579	ENSMMUG00000012723	MBD4	98	71.579	Macaca_mulatta
ENSHGLG00000009034	MBD4	95	70.221	ENSMNEG00000029752	MBD4	98	70.221	Macaca_nemestrina
ENSHGLG00000009034	MBD4	98	72.352	ENSMLEG00000024859	MBD4	98	71.479	Mandrillus_leucophaeus
ENSHGLG00000009034	MBD4	100	72.600	ENSMICG00000008022	MBD4	99	72.600	Microcebus_murinus
ENSHGLG00000009034	MBD4	68	47.449	ENSMOCG00000002466	-	97	47.449	Microtus_ochrogaster
ENSHGLG00000009034	MBD4	88	56.713	ENSMODG00000006399	-	99	56.713	Monodelphis_domestica
ENSHGLG00000009034	MBD4	87	43.452	ENSMALG00000021517	mbd4	87	43.452	Monopterus_albus
ENSHGLG00000009034	MBD4	100	64.974	MGP_CAROLIEiJ_G0028760	Mbd4	100	64.974	Mus_caroli
ENSHGLG00000009034	MBD4	100	65.079	ENSMUSG00000030322	Mbd4	100	65.079	Mus_musculus
ENSHGLG00000009034	MBD4	100	65.035	MGP_PahariEiJ_G0022511	-	100	65.035	Mus_pahari
ENSHGLG00000009034	MBD4	100	64.198	MGP_SPRETEiJ_G0029788	Mbd4	100	64.198	Mus_spretus
ENSHGLG00000009034	MBD4	100	68.761	ENSMPUG00000017195	MBD4	99	68.761	Mustela_putorius_furo
ENSHGLG00000009034	MBD4	95	73.616	ENSMLUG00000014766	MBD4	99	73.616	Myotis_lucifugus
ENSHGLG00000009034	MBD4	99	73.111	ENSNLEG00000005337	MBD4	98	73.111	Nomascus_leucogenys
ENSHGLG00000009034	MBD4	100	59.826	ENSOPRG00000000473	MBD4	99	59.826	Ochotona_princeps
ENSHGLG00000009034	MBD4	86	42.406	ENSONIG00000017212	mbd4	99	42.406	Oreochromis_niloticus
ENSHGLG00000009034	MBD4	68	45.802	ENSOANG00000004589	-	89	45.802	Ornithorhynchus_anatinus
ENSHGLG00000009034	MBD4	100	63.085	ENSOCUG00000013006	MBD4	99	63.085	Oryctolagus_cuniculus
ENSHGLG00000009034	MBD4	100	67.190	ENSOGAG00000010236	MBD4	100	67.190	Otolemur_garnettii
ENSHGLG00000009034	MBD4	100	65.505	ENSOARG00000014699	MBD4	100	65.505	Ovis_aries
ENSHGLG00000009034	MBD4	99	72.329	ENSPPAG00000036528	MBD4	98	72.329	Pan_paniscus
ENSHGLG00000009034	MBD4	100	69.983	ENSPPRG00000016480	MBD4	99	69.983	Panthera_pardus
ENSHGLG00000009034	MBD4	99	72.855	ENSPTRG00000015377	MBD4	98	72.855	Pan_troglodytes
ENSHGLG00000009034	MBD4	98	73.250	ENSPANG00000015047	MBD4	96	73.250	Papio_anubis
ENSHGLG00000009034	MBD4	88	48.577	ENSPSIG00000007892	MBD4	88	48.577	Pelodiscus_sinensis
ENSHGLG00000009034	MBD4	94	57.542	ENSPEMG00000006226	Mbd4	99	57.542	Peromyscus_maniculatus_bairdii
ENSHGLG00000009034	MBD4	93	55.660	ENSPCIG00000002276	-	100	55.660	Phascolarctos_cinereus
ENSHGLG00000009034	MBD4	99	72.105	ENSPPYG00000013417	MBD4	98	72.105	Pongo_abelii
ENSHGLG00000009034	MBD4	90	68.093	ENSPCAG00000012915	MBD4	93	68.093	Procavia_capensis
ENSHGLG00000009034	MBD4	100	73.519	ENSPVAG00000005238	MBD4	99	73.519	Pteropus_vampyrus
ENSHGLG00000009034	MBD4	97	65.343	ENSRNOG00000010919	Mbd4	96	65.343	Rattus_norvegicus
ENSHGLG00000009034	MBD4	98	73.070	ENSRBIG00000027722	MBD4	96	73.070	Rhinopithecus_bieti
ENSHGLG00000009034	MBD4	98	72.890	ENSRROG00000029136	MBD4	96	72.890	Rhinopithecus_roxellana
ENSHGLG00000009034	MBD4	99	71.076	ENSSBOG00000016810	MBD4	98	71.076	Saimiri_boliviensis_boliviensis
ENSHGLG00000009034	MBD4	96	53.916	ENSSHAG00000012953	MBD4	96	53.916	Sarcophilus_harrisii
ENSHGLG00000009034	MBD4	54	63.071	ENSSDUG00000001365	mbd4	62	63.071	Seriola_dumerili
ENSHGLG00000009034	MBD4	82	55.579	ENSSARG00000004496	-	80	55.579	Sorex_araneus
ENSHGLG00000009034	MBD4	87	50.980	ENSSPUG00000017344	MBD4	91	50.980	Sphenodon_punctatus
ENSHGLG00000009034	MBD4	100	68.467	ENSSSCG00000033303	MBD4	100	68.467	Sus_scrofa
ENSHGLG00000009034	MBD4	86	39.921	ENSTNIG00000017927	mbd4	99	39.921	Tetraodon_nigroviridis
ENSHGLG00000009034	MBD4	87	60.550	ENSTBEG00000003041	-	86	60.550	Tupaia_belangeri
ENSHGLG00000009034	MBD4	96	72.263	ENSTTRG00000011265	MBD4	98	72.263	Tursiops_truncatus
ENSHGLG00000009034	MBD4	88	74.400	ENSUAMG00000000814	MBD4	100	74.400	Ursus_americanus
ENSHGLG00000009034	MBD4	100	71.030	ENSUMAG00000017542	MBD4	100	71.030	Ursus_maritimus
ENSHGLG00000009034	MBD4	62	66.332	ENSVPAG00000004040	-	64	66.332	Vicugna_pacos
ENSHGLG00000009034	MBD4	100	69.913	ENSVVUG00000014222	MBD4	99	69.913	Vulpes_vulpes
ENSHGLG00000009034	MBD4	50	61.667	ENSXMAG00000021129	mbd4	65	61.667	Xiphophorus_maculatus