EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000009222 (Gene tree)
Gene ID: -
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 63008 bases
Position: chrJH602054.1:29601047-29664054
Accession: 101704761
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000012898	PRP1_N	PF06424.12	1.7e-57	1	1
ENSHGLP00000012899	PRP1_N	PF06424.12	1.7e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000013036	-	2817	-	ENSHGLP00000012899	938 (aa)	-	-
ENSHGLT00000013035	-	3037	XM_004841124	ENSHGLP00000012898	941 (aa)	XP_004841181	A0A0P6K8U3

Gene Model

Click here to download ENSHGLG00000009222's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000009222's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000009222	PRPF6	100	97.875	ENSG00000101161	PRPF6	100	97.875	Homo_sapiens
ENSHGLG00000009222	PRPF6	100	92.986	ENSAPOG00000010395	prpf6	96	93.411	Acanthochromis_polyacanthus
ENSHGLG00000009222	PRPF6	100	97.558	ENSAMEG00000001916	PRPF6	99	97.558	Ailuropoda_melanoleuca
ENSHGLG00000009222	PRPF6	100	92.774	ENSACIG00000019862	prpf6	96	93.199	Amphilophus_citrinellus
ENSHGLG00000009222	PRPF6	100	92.986	ENSAOCG00000012988	prpf6	96	93.411	Amphiprion_ocellaris
ENSHGLG00000009222	PRPF6	100	86.291	ENSAPEG00000008301	prpf6	100	86.823	Amphiprion_percula
ENSHGLG00000009222	PRPF6	100	92.455	ENSATEG00000005581	prpf6	96	92.880	Anabas_testudineus
ENSHGLG00000009222	PRPF6	100	97.981	ENSACAG00000006464	PRPF6	95	97.981	Anolis_carolinensis
ENSHGLG00000009222	PRPF6	100	97.981	ENSANAG00000012661	PRPF6	100	98.704	Aotus_nancymaae
ENSHGLG00000009222	PRPF6	100	92.667	ENSACLG00000025875	prpf6	96	93.092	Astatotilapia_calliptera
ENSHGLG00000009222	PRPF6	99	93.085	ENSAMXG00000001929	prpf6	96	93.511	Astyanax_mexicanus
ENSHGLG00000009222	PRPF6	100	98.193	ENSBTAG00000011656	PRPF6	100	98.193	Bos_taurus
ENSHGLG00000009222	PRPF6	100	97.981	ENSCJAG00000010616	PRPF6	100	97.981	Callithrix_jacchus
ENSHGLG00000009222	PRPF6	100	98.725	ENSCAFG00000013165	PRPF6	100	98.725	Canis_familiaris
ENSHGLG00000009222	PRPF6	100	98.725	ENSCAFG00020002050	PRPF6	100	98.725	Canis_lupus_dingo
ENSHGLG00000009222	PRPF6	100	98.193	ENSCHIG00000018187	PRPF6	100	98.193	Capra_hircus
ENSHGLG00000009222	PRPF6	100	98.618	ENSTSYG00000007814	PRPF6	100	98.618	Carlito_syrichta
ENSHGLG00000009222	PRPF6	97	98.473	ENSCAPG00000015077	PRPF6	100	98.473	Cavia_aperea
ENSHGLG00000009222	PRPF6	100	99.787	ENSCPOG00000007518	PRPF6	100	99.787	Cavia_porcellus
ENSHGLG00000009222	PRPF6	100	94.793	ENSCCAG00000024564	PRPF6	100	94.793	Cebus_capucinus
ENSHGLG00000009222	PRPF6	100	97.768	ENSCATG00000037473	PRPF6	100	97.768	Cercocebus_atys
ENSHGLG00000009222	PRPF6	100	95.749	ENSCLAG00000003854	PRPF6	100	95.749	Chinchilla_lanigera
ENSHGLG00000009222	PRPF6	100	92.714	ENSCSAG00000016742	PRPF6	100	92.714	Chlorocebus_sabaeus
ENSHGLG00000009222	PRPF6	85	81.138	ENSCHOG00000003315	-	100	81.138	Choloepus_hoffmanni
ENSHGLG00000009222	PRPF6	100	98.300	ENSCPBG00000013964	PRPF6	96	98.300	Chrysemys_picta_bellii
ENSHGLG00000009222	PRPF6	99	73.573	ENSCING00000008817	-	99	73.573	Ciona_intestinalis
ENSHGLG00000009222	PRPF6	100	97.981	ENSCANG00000038230	PRPF6	100	97.981	Colobus_angolensis_palliatus
ENSHGLG00000009222	PRPF6	100	99.575	ENSCGRG00001022666	Prpf6	100	99.575	Cricetulus_griseus_chok1gshd
ENSHGLG00000009222	PRPF6	100	87.248	ENSCSEG00000018561	prpf6	100	87.673	Cynoglossus_semilaevis
ENSHGLG00000009222	PRPF6	100	92.880	ENSCVAG00000010550	prpf6	96	93.305	Cyprinodon_variegatus
ENSHGLG00000009222	PRPF6	100	92.667	ENSDARG00000091367	prpf6	99	93.092	Danio_rerio
ENSHGLG00000009222	PRPF6	100	97.556	ENSDNOG00000040544	PRPF6	100	97.556	Dasypus_novemcinctus
ENSHGLG00000009222	PRPF6	91	98.364	ENSDORG00000005406	Prpf6	100	98.364	Dipodomys_ordii
ENSHGLG00000009222	PRPF6	99	71.888	FBgn0036828	CG6841	98	72.318	Drosophila_melanogaster
ENSHGLG00000009222	PRPF6	85	95.760	ENSETEG00000004447	PRPF6	85	95.760	Echinops_telfairi
ENSHGLG00000009222	PRPF6	99	87.169	ENSEBUG00000008835	prpf6	99	87.169	Eptatretus_burgeri
ENSHGLG00000009222	PRPF6	100	98.406	ENSEASG00005023115	PRPF6	100	98.406	Equus_asinus_asinus
ENSHGLG00000009222	PRPF6	100	94.155	ENSECAG00000013983	PRPF6	100	94.155	Equus_caballus
ENSHGLG00000009222	PRPF6	90	100.000	ENSEEUG00000000180	PRPF6	82	100.000	Erinaceus_europaeus
ENSHGLG00000009222	PRPF6	100	91.498	ENSELUG00000001945	prpf6	93	91.498	Esox_lucius
ENSHGLG00000009222	PRPF6	100	98.618	ENSFCAG00000001183	PRPF6	100	98.618	Felis_catus
ENSHGLG00000009222	PRPF6	100	98.193	ENSFALG00000010326	-	97	98.193	Ficedula_albicollis
ENSHGLG00000009222	PRPF6	100	90.542	ENSFALG00000006046	-	97	90.542	Ficedula_albicollis
ENSHGLG00000009222	PRPF6	100	98.300	ENSFDAG00000006451	PRPF6	100	99.773	Fukomys_damarensis
ENSHGLG00000009222	PRPF6	100	93.624	ENSFHEG00000000560	prpf6	96	93.624	Fundulus_heteroclitus
ENSHGLG00000009222	PRPF6	100	89.429	ENSGMOG00000015622	prpf6	99	89.429	Gadus_morhua
ENSHGLG00000009222	PRPF6	100	98.087	ENSGALG00000006001	PRPF6	100	98.087	Gallus_gallus
ENSHGLG00000009222	PRPF6	100	88.523	ENSGAFG00000021109	prpf6	96	88.948	Gambusia_affinis
ENSHGLG00000009222	PRPF6	100	91.498	ENSGACG00000002576	prpf6	99	91.498	Gasterosteus_aculeatus
ENSHGLG00000009222	PRPF6	100	98.193	ENSGAGG00000008653	PRPF6	96	98.193	Gopherus_agassizii
ENSHGLG00000009222	PRPF6	100	97.875	ENSGGOG00000016876	PRPF6	100	97.875	Gorilla_gorilla
ENSHGLG00000009222	PRPF6	100	92.667	ENSHBUG00000004496	prpf6	96	93.092	Haplochromis_burtoni
ENSHGLG00000009222	PRPF6	97	100.000	ENSHGLG00100016600	PRPF6	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000009222	PRPF6	100	91.498	ENSHCOG00000011513	prpf6	96	91.923	Hippocampus_comes
ENSHGLG00000009222	PRPF6	100	93.518	ENSIPUG00000004912	prpf6	96	93.518	Ictalurus_punctatus
ENSHGLG00000009222	PRPF6	100	96.815	ENSSTOG00000002922	PRPF6	100	96.815	Ictidomys_tridecemlineatus
ENSHGLG00000009222	PRPF6	100	99.681	ENSJJAG00000000836	Prpf6	100	99.681	Jaculus_jaculus
ENSHGLG00000009222	PRPF6	100	92.455	ENSKMAG00000017800	prpf6	96	92.880	Kryptolebias_marmoratus
ENSHGLG00000009222	PRPF6	100	92.136	ENSLBEG00000012582	prpf6	96	92.136	Labrus_bergylta
ENSHGLG00000009222	PRPF6	100	94.687	ENSLOCG00000004827	prpf6	96	93.730	Lepisosteus_oculatus
ENSHGLG00000009222	PRPF6	100	97.662	ENSLAFG00000005272	PRPF6	100	97.662	Loxodonta_africana
ENSHGLG00000009222	PRPF6	100	97.981	ENSMFAG00000037542	PRPF6	100	97.981	Macaca_fascicularis
ENSHGLG00000009222	PRPF6	100	91.401	ENSMMUG00000015558	PRPF6	98	99.653	Macaca_mulatta
ENSHGLG00000009222	PRPF6	100	83.475	ENSMNEG00000045555	PRPF6	100	83.475	Macaca_nemestrina
ENSHGLG00000009222	PRPF6	100	92.774	ENSMAMG00000010718	prpf6	96	93.199	Mastacembelus_armatus
ENSHGLG00000009222	PRPF6	100	92.144	ENSMZEG00005015261	-	99	92.569	Maylandia_zebra
ENSHGLG00000009222	PRPF6	94	92.177	ENSMZEG00005026539	prpf6	100	92.630	Maylandia_zebra
ENSHGLG00000009222	PRPF6	97	98.146	ENSMGAG00000006634	PRPF6	100	98.146	Meleagris_gallopavo
ENSHGLG00000009222	PRPF6	100	99.469	ENSMAUG00000013969	Prpf6	100	99.469	Mesocricetus_auratus
ENSHGLG00000009222	PRPF6	87	98.175	ENSMICG00000017793	PRPF6	99	98.175	Microcebus_murinus
ENSHGLG00000009222	PRPF6	100	99.362	ENSMOCG00000001701	Prpf6	100	99.362	Microtus_ochrogaster
ENSHGLG00000009222	PRPF6	100	91.817	ENSMMOG00000020419	prpf6	100	92.242	Mola_mola
ENSHGLG00000009222	PRPF6	99	98.890	ENSMODG00000017051	PRPF6	99	98.890	Monodelphis_domestica
ENSHGLG00000009222	PRPF6	99	92.911	ENSMALG00000000089	prpf6	100	92.911	Monopterus_albus
ENSHGLG00000009222	PRPF6	100	92.880	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSHGLG00000009222	PRPF6	100	99.469	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSHGLG00000009222	PRPF6	100	99.469	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSHGLG00000009222	PRPF6	100	99.469	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSHGLG00000009222	PRPF6	91	97.974	ENSMPUG00000008673	PRPF6	99	97.974	Mustela_putorius_furo
ENSHGLG00000009222	PRPF6	100	99.681	ENSNGAG00000003365	Prpf6	100	99.681	Nannospalax_galili
ENSHGLG00000009222	PRPF6	100	92.774	ENSNBRG00000015025	prpf6	96	93.199	Neolamprologus_brichardi
ENSHGLG00000009222	PRPF6	100	97.875	ENSNLEG00000010208	PRPF6	100	97.875	Nomascus_leucogenys
ENSHGLG00000009222	PRPF6	100	88.933	ENSMEUG00000009824	-	90	88.933	Notamacropus_eugenii
ENSHGLG00000009222	PRPF6	100	93.518	ENSODEG00000004841	PRPF6	100	93.518	Octodon_degus
ENSHGLG00000009222	PRPF6	100	92.667	ENSONIG00000017406	prpf6	96	93.092	Oreochromis_niloticus
ENSHGLG00000009222	PRPF6	100	98.512	ENSOANG00000004920	PRPF6	100	98.512	Ornithorhynchus_anatinus
ENSHGLG00000009222	PRPF6	99	96.888	ENSOCUG00000014151	PRPF6	100	96.888	Oryctolagus_cuniculus
ENSHGLG00000009222	PRPF6	100	92.455	ENSORLG00000009592	prpf6	96	92.455	Oryzias_latipes
ENSHGLG00000009222	PRPF6	100	92.561	ENSORLG00020001458	prpf6	96	92.561	Oryzias_latipes_hni
ENSHGLG00000009222	PRPF6	100	92.561	ENSORLG00015018762	prpf6	96	92.561	Oryzias_latipes_hsok
ENSHGLG00000009222	PRPF6	100	92.455	ENSOMEG00000012174	prpf6	96	92.880	Oryzias_melastigma
ENSHGLG00000009222	PRPF6	100	91.295	ENSOGAG00000007573	PRPF6	100	91.295	Otolemur_garnettii
ENSHGLG00000009222	PRPF6	100	97.768	ENSOARG00000008776	PRPF6	99	97.768	Ovis_aries
ENSHGLG00000009222	PRPF6	100	97.875	ENSPPAG00000008686	PRPF6	100	97.875	Pan_paniscus
ENSHGLG00000009222	PRPF6	100	98.512	ENSPPRG00000008497	PRPF6	100	98.512	Panthera_pardus
ENSHGLG00000009222	PRPF6	97	98.473	ENSPTIG00000011184	PRPF6	97	98.473	Panthera_tigris_altaica
ENSHGLG00000009222	PRPF6	100	97.875	ENSPTRG00000013765	PRPF6	100	97.875	Pan_troglodytes
ENSHGLG00000009222	PRPF6	100	97.450	ENSPANG00000024135	PRPF6	100	97.450	Papio_anubis
ENSHGLG00000009222	PRPF6	100	94.261	ENSPKIG00000005627	prpf6	99	94.687	Paramormyrops_kingsleyae
ENSHGLG00000009222	PRPF6	94	98.413	ENSPSIG00000007717	PRPF6	100	98.413	Pelodiscus_sinensis
ENSHGLG00000009222	PRPF6	100	90.234	ENSPMGG00000008925	prpf6	96	90.446	Periophthalmus_magnuspinnatus
ENSHGLG00000009222	PRPF6	100	99.362	ENSPEMG00000016036	Prpf6	100	99.362	Peromyscus_maniculatus_bairdii
ENSHGLG00000009222	PRPF6	99	88.204	ENSPMAG00000006144	prpf6	99	88.204	Petromyzon_marinus
ENSHGLG00000009222	PRPF6	100	98.618	ENSPCIG00000017909	PRPF6	100	98.618	Phascolarctos_cinereus
ENSHGLG00000009222	PRPF6	100	93.199	ENSPFOG00000006431	prpf6	96	93.624	Poecilia_formosa
ENSHGLG00000009222	PRPF6	100	93.092	ENSPLAG00000005974	prpf6	96	93.518	Poecilia_latipinna
ENSHGLG00000009222	PRPF6	100	93.305	ENSPMEG00000009977	prpf6	96	93.730	Poecilia_mexicana
ENSHGLG00000009222	PRPF6	100	93.199	ENSPREG00000017993	prpf6	92	93.624	Poecilia_reticulata
ENSHGLG00000009222	PRPF6	100	97.343	ENSPPYG00000011256	PRPF6	100	97.343	Pongo_abelii
ENSHGLG00000009222	PRPF6	95	99.673	ENSPCAG00000006536	PRPF6	88	99.673	Procavia_capensis
ENSHGLG00000009222	PRPF6	100	98.087	ENSPCOG00000016881	PRPF6	100	98.087	Propithecus_coquereli
ENSHGLG00000009222	PRPF6	100	92.242	ENSPVAG00000014316	PRPF6	100	92.242	Pteropus_vampyrus
ENSHGLG00000009222	PRPF6	100	76.221	ENSPNYG00000001939	prpf6	96	78.473	Pundamilia_nyererei
ENSHGLG00000009222	PRPF6	100	93.411	ENSPNAG00000015606	prpf6	96	93.836	Pygocentrus_nattereri
ENSHGLG00000009222	PRPF6	100	99.469	ENSRNOG00000051498	Prpf6	100	99.469	Rattus_norvegicus
ENSHGLG00000009222	PRPF6	100	97.981	ENSRBIG00000043613	PRPF6	100	97.981	Rhinopithecus_bieti
ENSHGLG00000009222	PRPF6	100	94.815	ENSRROG00000040969	PRPF6	98	98.270	Rhinopithecus_roxellana
ENSHGLG00000009222	PRPF6	97	90.262	ENSSBOG00000020632	PRPF6	97	90.262	Saimiri_boliviensis_boliviensis
ENSHGLG00000009222	PRPF6	100	98.618	ENSSHAG00000016810	PRPF6	100	98.618	Sarcophilus_harrisii
ENSHGLG00000009222	PRPF6	99	94.522	ENSSFOG00015020859	prpf6	100	94.952	Scleropages_formosus
ENSHGLG00000009222	PRPF6	100	92.030	ENSSMAG00000008112	prpf6	96	92.030	Scophthalmus_maximus
ENSHGLG00000009222	PRPF6	100	92.667	ENSSDUG00000016142	prpf6	96	93.092	Seriola_dumerili
ENSHGLG00000009222	PRPF6	100	92.667	ENSSLDG00000025283	prpf6	100	89.586	Seriola_lalandi_dorsalis
ENSHGLG00000009222	PRPF6	94	96.825	ENSSPUG00000018260	PRPF6	100	96.825	Sphenodon_punctatus
ENSHGLG00000009222	PRPF6	100	92.667	ENSSPAG00000015850	prpf6	96	93.092	Stegastes_partitus
ENSHGLG00000009222	PRPF6	100	98.300	ENSSSCG00000029119	PRPF6	100	98.186	Sus_scrofa
ENSHGLG00000009222	PRPF6	100	98.300	ENSTGUG00000007221	PRPF6	99	98.300	Taeniopygia_guttata
ENSHGLG00000009222	PRPF6	100	91.605	ENSTRUG00000002920	prpf6	96	92.030	Takifugu_rubripes
ENSHGLG00000009222	PRPF6	100	85.307	ENSTNIG00000017873	prpf6	100	85.729	Tetraodon_nigroviridis
ENSHGLG00000009222	PRPF6	89	98.895	ENSTBEG00000005348	PRPF6	85	98.895	Tupaia_belangeri
ENSHGLG00000009222	PRPF6	100	97.768	ENSTTRG00000013068	PRPF6	100	97.768	Tursiops_truncatus
ENSHGLG00000009222	PRPF6	98	97.065	ENSUMAG00000021631	PRPF6	98	97.065	Ursus_maritimus
ENSHGLG00000009222	PRPF6	100	98.725	ENSVVUG00000014948	PRPF6	100	98.725	Vulpes_vulpes
ENSHGLG00000009222	PRPF6	100	95.749	ENSXETG00000012054	prpf6	97	96.174	Xenopus_tropicalis
ENSHGLG00000009222	PRPF6	100	93.305	ENSXCOG00000008082	prpf6	96	93.730	Xiphophorus_couchianus
ENSHGLG00000009222	PRPF6	100	93.305	ENSXMAG00000015581	prpf6	96	93.730	Xiphophorus_maculatus