EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000009306 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6B
Alias: KIAA1093
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 199346 bases
Position: chrJH602065.1:8137532-8336877
Accession: 101720757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000013019	Ago_hook	PF10427.9	2.9e-20	1	1
ENSHGLP00000013016	Ago_hook	PF10427.9	3e-20	1	1
ENSHGLP00000013018	Ago_hook	PF10427.9	3e-20	1	1
ENSHGLP00000013017	Ago_hook	PF10427.9	3e-20	1	1
ENSHGLP00000013015	Ago_hook	PF10427.9	3.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000013153	TNRC6B-202	6315	XM_013072453	ENSHGLP00000013016	1815 (aa)	XP_012927908	UPI00034FB27B
ENSHGLT00000013152	TNRC6B-201	6486	-	ENSHGLP00000013015	1916 (aa)	-	-
ENSHGLT00000013155	TNRC6B-204	5511	XM_013072451	ENSHGLP00000013018	1836 (aa)	XP_012927905	UPI0006574C5A
ENSHGLT00000013154	TNRC6B-203	5415	-	ENSHGLP00000013017	1804 (aa)	-	-
ENSHGLT00000013156	TNRC6B-205	5397	XM_013072460	ENSHGLP00000013019	1798 (aa)	XP_012927914	UPI0006575586

Gene Model

Click here to download ENSHGLG00000009306's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000009306's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000009306	TNRC6B	97	36.227	ENSHGLG00000012474	-	97	36.538
ENSHGLG00000009306	TNRC6B	92	38.168	ENSHGLG00000007368	-	90	37.055
ENSHGLG00000009306	TNRC6B	99	37.164	ENSHGLG00000004809	TNRC6C	98	36.950

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000009306	TNRC6B	100	97.175	ENSG00000100354	TNRC6B	100	97.297	Homo_sapiens
ENSHGLG00000009306	TNRC6B	100	95.951	ENSAMEG00000011025	TNRC6B	100	96.119	Ailuropoda_melanoleuca
ENSHGLG00000009306	TNRC6B	100	80.509	ENSAPLG00000009347	TNRC6B	100	84.252	Anas_platyrhynchos
ENSHGLG00000009306	TNRC6B	97	72.885	ENSACAG00000007281	TNRC6B	99	73.165	Anolis_carolinensis
ENSHGLG00000009306	TNRC6B	100	96.958	ENSANAG00000035042	TNRC6B	100	96.958	Aotus_nancymaae
ENSHGLG00000009306	TNRC6B	55	45.225	ENSAMXG00000008707	tnrc6b	91	38.722	Astyanax_mexicanus
ENSHGLG00000009306	TNRC6B	100	94.786	ENSBTAG00000021076	TNRC6B	99	95.137	Bos_taurus
ENSHGLG00000009306	TNRC6B	100	96.578	ENSCJAG00000002732	TNRC6B	99	99.718	Callithrix_jacchus
ENSHGLG00000009306	TNRC6B	100	96.177	ENSCAFG00000001255	TNRC6B	99	96.308	Canis_familiaris
ENSHGLG00000009306	TNRC6B	99	96.596	ENSCAFG00020002189	TNRC6B	99	96.596	Canis_lupus_dingo
ENSHGLG00000009306	TNRC6B	99	94.608	ENSCHIG00000003491	TNRC6B	100	95.164	Capra_hircus
ENSHGLG00000009306	TNRC6B	100	96.632	ENSTSYG00000011836	TNRC6B	100	96.632	Carlito_syrichta
ENSHGLG00000009306	TNRC6B	100	98.238	ENSCPOG00000005705	TNRC6B	100	98.238	Cavia_porcellus
ENSHGLG00000009306	TNRC6B	100	95.709	ENSCCAG00000019912	TNRC6B	100	95.709	Cebus_capucinus
ENSHGLG00000009306	TNRC6B	100	96.200	ENSCATG00000029291	TNRC6B	100	96.200	Cercocebus_atys
ENSHGLG00000009306	TNRC6B	100	98.505	ENSCLAG00000016942	TNRC6B	100	98.505	Chinchilla_lanigera
ENSHGLG00000009306	TNRC6B	97	92.672	ENSCSAG00000006021	TNRC6B	99	92.785	Chlorocebus_sabaeus
ENSHGLG00000009306	TNRC6B	93	85.581	ENSCPBG00000022932	TNRC6B	99	85.557	Chrysemys_picta_bellii
ENSHGLG00000009306	TNRC6B	100	96.634	ENSCANG00000030776	TNRC6B	100	96.634	Colobus_angolensis_palliatus
ENSHGLG00000009306	TNRC6B	96	95.483	ENSCGRG00001020166	Tnrc6b	99	95.369	Cricetulus_griseus_chok1gshd
ENSHGLG00000009306	TNRC6B	100	95.540	ENSCGRG00000016696	Tnrc6b	99	95.478	Cricetulus_griseus_crigri
ENSHGLG00000009306	TNRC6B	100	94.515	ENSDNOG00000012744	TNRC6B	100	94.830	Dasypus_novemcinctus
ENSHGLG00000009306	TNRC6B	100	96.806	ENSDORG00000003386	Tnrc6b	100	96.806	Dipodomys_ordii
ENSHGLG00000009306	TNRC6B	97	83.928	ENSETEG00000006570	TNRC6B	99	84.720	Echinops_telfairi
ENSHGLG00000009306	TNRC6B	100	96.454	ENSEASG00005005306	TNRC6B	100	96.454	Equus_asinus_asinus
ENSHGLG00000009306	TNRC6B	100	96.813	ENSECAG00000009759	TNRC6B	100	99.500	Equus_caballus
ENSHGLG00000009306	TNRC6B	57	97.070	ENSEEUG00000008690	-	59	97.070	Erinaceus_europaeus
ENSHGLG00000009306	TNRC6B	100	96.524	ENSFCAG00000004791	TNRC6B	100	96.537	Felis_catus
ENSHGLG00000009306	TNRC6B	94	87.456	ENSFALG00000012195	TNRC6B	100	87.515	Ficedula_albicollis
ENSHGLG00000009306	TNRC6B	100	98.403	ENSFDAG00000021368	TNRC6B	100	98.403	Fukomys_damarensis
ENSHGLG00000009306	TNRC6B	95	91.269	ENSGALG00000012050	TNRC6B	97	88.014	Gallus_gallus
ENSHGLG00000009306	TNRC6B	100	87.528	ENSGAGG00000025188	TNRC6B	98	87.602	Gopherus_agassizii
ENSHGLG00000009306	TNRC6B	100	97.121	ENSGGOG00000008444	TNRC6B	100	97.121	Gorilla_gorilla
ENSHGLG00000009306	TNRC6B	100	99.504	ENSHGLG00100018108	TNRC6B	100	99.608	Heterocephalus_glaber_male
ENSHGLG00000009306	TNRC6B	82	44.760	ENSIPUG00000001515	tnrc6b	79	45.739	Ictalurus_punctatus
ENSHGLG00000009306	TNRC6B	100	97.081	ENSSTOG00000008927	TNRC6B	100	97.081	Ictidomys_tridecemlineatus
ENSHGLG00000009306	TNRC6B	100	95.207	ENSJJAG00000015779	Tnrc6b	100	95.262	Jaculus_jaculus
ENSHGLG00000009306	TNRC6B	100	59.231	ENSLACG00000000628	-	99	61.303	Latimeria_chalumnae
ENSHGLG00000009306	TNRC6B	80	94.244	ENSLAFG00000014473	TNRC6B	100	94.452	Loxodonta_africana
ENSHGLG00000009306	TNRC6B	100	96.308	ENSMFAG00000003862	TNRC6B	100	96.308	Macaca_fascicularis
ENSHGLG00000009306	TNRC6B	100	96.760	ENSMMUG00000021345	TNRC6B	100	96.226	Macaca_mulatta
ENSHGLG00000009306	TNRC6B	97	96.672	ENSMNEG00000042745	TNRC6B	100	96.672	Macaca_nemestrina
ENSHGLG00000009306	TNRC6B	100	96.797	ENSMLEG00000041780	TNRC6B	100	96.797	Mandrillus_leucophaeus
ENSHGLG00000009306	TNRC6B	100	87.887	ENSMGAG00000012333	TNRC6B	99	87.956	Meleagris_gallopavo
ENSHGLG00000009306	TNRC6B	100	94.548	ENSMAUG00000016123	Tnrc6b	98	95.647	Mesocricetus_auratus
ENSHGLG00000009306	TNRC6B	100	96.634	ENSMICG00000014056	TNRC6B	100	96.634	Microcebus_murinus
ENSHGLG00000009306	TNRC6B	97	96.000	ENSMOCG00000020334	Tnrc6b	100	96.000	Microtus_ochrogaster
ENSHGLG00000009306	TNRC6B	100	94.882	MGP_CAROLIEiJ_G0020043	Tnrc6b	100	95.157	Mus_caroli
ENSHGLG00000009306	TNRC6B	100	94.827	ENSMUSG00000047888	Tnrc6b	100	95.102	Mus_musculus
ENSHGLG00000009306	TNRC6B	100	94.548	MGP_PahariEiJ_G0020045	Tnrc6b	100	94.824	Mus_pahari
ENSHGLG00000009306	TNRC6B	100	95.056	MGP_SPRETEiJ_G0020941	Tnrc6b	100	95.518	Mus_spretus
ENSHGLG00000009306	TNRC6B	98	96.604	ENSMPUG00000016442	TNRC6B	99	88.871	Mustela_putorius_furo
ENSHGLG00000009306	TNRC6B	100	95.172	ENSMLUG00000008765	TNRC6B	99	95.650	Myotis_lucifugus
ENSHGLG00000009306	TNRC6B	100	96.258	ENSNGAG00000021294	Tnrc6b	100	96.258	Nannospalax_galili
ENSHGLG00000009306	TNRC6B	90	97.009	ENSNLEG00000015311	TNRC6B	100	96.694	Nomascus_leucogenys
ENSHGLG00000009306	TNRC6B	91	94.527	ENSOPRG00000012054	TNRC6B	86	94.527	Ochotona_princeps
ENSHGLG00000009306	TNRC6B	100	98.458	ENSODEG00000013146	TNRC6B	100	98.458	Octodon_degus
ENSHGLG00000009306	TNRC6B	95	43.324	ENSONIG00000019679	-	99	39.803	Oreochromis_niloticus
ENSHGLG00000009306	TNRC6B	100	95.220	ENSOCUG00000016128	TNRC6B	100	95.220	Oryctolagus_cuniculus
ENSHGLG00000009306	TNRC6B	100	96.674	ENSOGAG00000011096	TNRC6B	100	96.471	Otolemur_garnettii
ENSHGLG00000009306	TNRC6B	100	95.175	ENSOARG00000017238	TNRC6B	100	95.285	Ovis_aries
ENSHGLG00000009306	TNRC6B	100	97.067	ENSPPAG00000028514	TNRC6B	100	97.067	Pan_paniscus
ENSHGLG00000009306	TNRC6B	100	96.143	ENSPPRG00000017741	TNRC6B	100	96.143	Panthera_pardus
ENSHGLG00000009306	TNRC6B	100	92.568	ENSPTIG00000022064	TNRC6B	98	92.790	Panthera_tigris_altaica
ENSHGLG00000009306	TNRC6B	100	96.958	ENSPTRG00000047826	TNRC6B	100	96.958	Pan_troglodytes
ENSHGLG00000009306	TNRC6B	100	88.753	ENSPANG00000009271	TNRC6B	90	97.586	Papio_anubis
ENSHGLG00000009306	TNRC6B	97	87.479	ENSPSIG00000005318	TNRC6B	99	87.535	Pelodiscus_sinensis
ENSHGLG00000009306	TNRC6B	100	95.047	ENSPEMG00000011403	Tnrc6b	100	95.322	Peromyscus_maniculatus_bairdii
ENSHGLG00000009306	TNRC6B	100	86.188	ENSPCIG00000020347	TNRC6B	99	86.546	Phascolarctos_cinereus
ENSHGLG00000009306	TNRC6B	99	39.358	ENSPFOG00000006033	-	96	43.549	Poecilia_formosa
ENSHGLG00000009306	TNRC6B	68	44.340	ENSPLAG00000001418	-	98	38.895	Poecilia_latipinna
ENSHGLG00000009306	TNRC6B	98	93.117	ENSPPYG00000011849	TNRC6B	100	93.960	Pongo_abelii
ENSHGLG00000009306	TNRC6B	78	93.210	ENSPCAG00000008739	TNRC6B	77	91.776	Procavia_capensis
ENSHGLG00000009306	TNRC6B	100	96.851	ENSPCOG00000020790	TNRC6B	100	96.851	Propithecus_coquereli
ENSHGLG00000009306	TNRC6B	93	96.381	ENSPVAG00000004975	TNRC6B	94	95.976	Pteropus_vampyrus
ENSHGLG00000009306	TNRC6B	100	95.275	ENSRNOG00000024907	Tnrc6b	100	95.055	Rattus_norvegicus
ENSHGLG00000009306	TNRC6B	100	96.580	ENSRBIG00000035576	TNRC6B	100	96.580	Rhinopithecus_bieti
ENSHGLG00000009306	TNRC6B	100	96.526	ENSRROG00000031135	TNRC6B	100	96.526	Rhinopithecus_roxellana
ENSHGLG00000009306	TNRC6B	99	96.993	ENSSBOG00000029743	TNRC6B	98	96.993	Saimiri_boliviensis_boliviensis
ENSHGLG00000009306	TNRC6B	100	86.195	ENSSHAG00000009692	TNRC6B	99	86.616	Sarcophilus_harrisii
ENSHGLG00000009306	TNRC6B	65	86.364	ENSSARG00000007971	-	70	86.364	Sorex_araneus
ENSHGLG00000009306	TNRC6B	94	87.286	ENSSPUG00000010801	TNRC6B	100	87.226	Sphenodon_punctatus
ENSHGLG00000009306	TNRC6B	100	95.824	ENSSSCG00000000078	TNRC6B	100	95.898	Sus_scrofa
ENSHGLG00000009306	TNRC6B	91	83.524	ENSTGUG00000010138	-	99	83.524	Taeniopygia_guttata
ENSHGLG00000009306	TNRC6B	94	96.860	ENSTTRG00000011465	TNRC6B	98	96.860	Tursiops_truncatus
ENSHGLG00000009306	TNRC6B	100	94.848	ENSUAMG00000007174	TNRC6B	99	95.409	Ursus_americanus
ENSHGLG00000009306	TNRC6B	97	96.106	ENSUMAG00000014336	TNRC6B	100	96.106	Ursus_maritimus
ENSHGLG00000009306	TNRC6B	64	90.909	ENSVPAG00000001467	TNRC6B	75	89.697	Vicugna_pacos
ENSHGLG00000009306	TNRC6B	100	96.374	ENSVVUG00000007064	TNRC6B	100	97.360	Vulpes_vulpes
ENSHGLG00000009306	TNRC6B	59	46.064	ENSXCOG00000003042	-	98	38.163	Xiphophorus_couchianus