EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000009334 (Gene tree)
Gene ID: -
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 36899 bases
Position: chrJH602145.1:7042790-7079688
Accession: 101726498
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000013056	DUF1604	PF07713.13	9.2e-36	1	1
ENSHGLP00000013055	DUF1604	PF07713.13	9.8e-36	1	1
ENSHGLP00000013056	G-patch	PF01585.23	1.9e-07	1	1
ENSHGLP00000013055	G-patch	PF01585.23	2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000013193	GPATCH1-202	2670	-	ENSHGLP00000013056	890 (aa)	-	-
ENSHGLT00000013192	GPATCH1-201	3027	XM_004867106	ENSHGLP00000013055	929 (aa)	XP_004867163	UPI00034FAD26

Gene Model

Click here to download ENSHGLG00000009334's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000009334's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000009334	GPATCH1	100	85.027	ENSG00000076650	GPATCH1	100	84.706	Homo_sapiens
ENSHGLG00000009334	GPATCH1	100	85.011	ENSAMEG00000015575	GPATCH1	100	84.582	Ailuropoda_melanoleuca
ENSHGLG00000009334	GPATCH1	81	69.677	ENSAOCG00000006668	gpatch1	77	68.508	Amphiprion_ocellaris
ENSHGLG00000009334	GPATCH1	81	54.746	ENSAPEG00000000026	gpatch1	91	49.205	Amphiprion_percula
ENSHGLG00000009334	GPATCH1	81	52.725	ENSATEG00000014494	gpatch1	90	50.458	Anabas_testudineus
ENSHGLG00000009334	GPATCH1	93	58.501	ENSAPLG00000007584	GPATCH1	96	60.369	Anas_platyrhynchos
ENSHGLG00000009334	GPATCH1	100	83.209	ENSANAG00000027002	GPATCH1	100	83.102	Aotus_nancymaae
ENSHGLG00000009334	GPATCH1	81	54.315	ENSACLG00000024740	gpatch1	81	54.161	Astatotilapia_calliptera
ENSHGLG00000009334	GPATCH1	91	50.754	ENSAMXG00000020177	gpatch1	88	53.519	Astyanax_mexicanus
ENSHGLG00000009334	GPATCH1	91	83.666	ENSBTAG00000000721	GPATCH1	100	83.405	Bos_taurus
ENSHGLG00000009334	GPATCH1	69	31.142	WBGene00011109	R07E5.1	68	31.763	Caenorhabditis_elegans
ENSHGLG00000009334	GPATCH1	100	82.888	ENSCJAG00000000684	GPATCH1	100	82.888	Callithrix_jacchus
ENSHGLG00000009334	GPATCH1	100	84.813	ENSCAFG00000007457	GPATCH1	84	84.278	Canis_familiaris
ENSHGLG00000009334	GPATCH1	94	84.703	ENSCAFG00020019731	GPATCH1	91	84.174	Canis_lupus_dingo
ENSHGLG00000009334	GPATCH1	99	84.256	ENSCHIG00000019626	GPATCH1	100	83.833	Capra_hircus
ENSHGLG00000009334	GPATCH1	97	81.958	ENSCAPG00000008827	GPATCH1	100	82.728	Cavia_aperea
ENSHGLG00000009334	GPATCH1	100	85.531	ENSCPOG00000024477	GPATCH1	100	86.066	Cavia_porcellus
ENSHGLG00000009334	GPATCH1	100	82.567	ENSCCAG00000024676	GPATCH1	100	82.995	Cebus_capucinus
ENSHGLG00000009334	GPATCH1	100	84.599	ENSCATG00000043637	GPATCH1	100	84.278	Cercocebus_atys
ENSHGLG00000009334	GPATCH1	99	82.366	ENSCLAG00000003395	-	99	85.874	Chinchilla_lanigera
ENSHGLG00000009334	GPATCH1	100	82.479	ENSCSAG00000004743	GPATCH1	100	82.158	Chlorocebus_sabaeus
ENSHGLG00000009334	GPATCH1	87	89.302	ENSCHOG00000012865	GPATCH1	100	72.864	Choloepus_hoffmanni
ENSHGLG00000009334	GPATCH1	81	65.447	ENSCPBG00000000666	GPATCH1	95	67.018	Chrysemys_picta_bellii
ENSHGLG00000009334	GPATCH1	93	32.288	ENSCING00000012518	-	98	33.560	Ciona_intestinalis
ENSHGLG00000009334	GPATCH1	90	79.657	ENSCANG00000012540	GPATCH1	100	78.922	Colobus_angolensis_palliatus
ENSHGLG00000009334	GPATCH1	97	78.855	ENSCGRG00001016736	Gpatch1	100	79.758	Cricetulus_griseus_chok1gshd
ENSHGLG00000009334	GPATCH1	97	64.989	ENSCGRG00000005069	Gpatch1	91	66.863	Cricetulus_griseus_crigri
ENSHGLG00000009334	GPATCH1	78	49.889	ENSCSEG00000019456	-	84	61.468	Cynoglossus_semilaevis
ENSHGLG00000009334	GPATCH1	95	48.148	ENSDARG00000033418	gpatch1	92	51.160	Danio_rerio
ENSHGLG00000009334	GPATCH1	91	83.587	ENSDNOG00000005291	GPATCH1	95	83.236	Dasypus_novemcinctus
ENSHGLG00000009334	GPATCH1	94	77.740	ENSDORG00000012546	Gpatch1	95	77.374	Dipodomys_ordii
ENSHGLG00000009334	GPATCH1	83	31.934	FBgn0036386	CG8833	67	33.719	Drosophila_melanogaster
ENSHGLG00000009334	GPATCH1	99	73.377	ENSETEG00000003626	GPATCH1	92	73.505	Echinops_telfairi
ENSHGLG00000009334	GPATCH1	94	37.202	ENSEBUG00000011286	gpatch1	92	38.020	Eptatretus_burgeri
ENSHGLG00000009334	GPATCH1	91	83.962	ENSEASG00005021162	GPATCH1	93	85.607	Equus_asinus_asinus
ENSHGLG00000009334	GPATCH1	94	84.800	ENSECAG00000022743	GPATCH1	88	84.742	Equus_caballus
ENSHGLG00000009334	GPATCH1	77	77.941	ENSEEUG00000012925	GPATCH1	77	77.941	Erinaceus_europaeus
ENSHGLG00000009334	GPATCH1	100	83.726	ENSFCAG00000014917	GPATCH1	100	83.512	Felis_catus
ENSHGLG00000009334	GPATCH1	99	61.910	ENSFALG00000007821	GPATCH1	89	63.015	Ficedula_albicollis
ENSHGLG00000009334	GPATCH1	100	86.303	ENSFDAG00000003871	GPATCH1	100	89.621	Fukomys_damarensis
ENSHGLG00000009334	GPATCH1	80	50.812	ENSGMOG00000003830	gpatch1	95	50.812	Gadus_morhua
ENSHGLG00000009334	GPATCH1	93	62.018	ENSGALG00000004839	GPATCH1	94	63.176	Gallus_gallus
ENSHGLG00000009334	GPATCH1	81	51.358	ENSGACG00000017544	gpatch1	93	49.824	Gasterosteus_aculeatus
ENSHGLG00000009334	GPATCH1	100	63.845	ENSGAGG00000010067	GPATCH1	100	64.278	Gopherus_agassizii
ENSHGLG00000009334	GPATCH1	98	84.004	ENSGGOG00000010862	GPATCH1	100	84.286	Gorilla_gorilla
ENSHGLG00000009334	GPATCH1	81	54.789	ENSHBUG00000023462	gpatch1	82	54.489	Haplochromis_burtoni
ENSHGLG00000009334	GPATCH1	100	99.892	ENSHGLG00100018074	GPATCH1	100	99.892	Heterocephalus_glaber_male
ENSHGLG00000009334	GPATCH1	93	50.055	ENSIPUG00000014977	gpatch1	90	51.195	Ictalurus_punctatus
ENSHGLG00000009334	GPATCH1	100	84.813	ENSSTOG00000003720	GPATCH1	100	84.278	Ictidomys_tridecemlineatus
ENSHGLG00000009334	GPATCH1	91	80.702	ENSJJAG00000023765	Gpatch1	100	80.683	Jaculus_jaculus
ENSHGLG00000009334	GPATCH1	89	50.935	ENSKMAG00000017950	gpatch1	89	51.744	Kryptolebias_marmoratus
ENSHGLG00000009334	GPATCH1	91	57.401	ENSLACG00000008130	GPATCH1	90	58.596	Latimeria_chalumnae
ENSHGLG00000009334	GPATCH1	81	56.809	ENSLOCG00000001800	gpatch1	83	56.781	Lepisosteus_oculatus
ENSHGLG00000009334	GPATCH1	99	83.388	ENSLAFG00000013589	GPATCH1	100	82.976	Loxodonta_africana
ENSHGLG00000009334	GPATCH1	90	84.597	ENSMFAG00000034418	GPATCH1	95	84.242	Macaca_fascicularis
ENSHGLG00000009334	GPATCH1	100	84.188	ENSMMUG00000011790	GPATCH1	100	83.868	Macaca_mulatta
ENSHGLG00000009334	GPATCH1	100	83.957	ENSMNEG00000045084	GPATCH1	100	83.636	Macaca_nemestrina
ENSHGLG00000009334	GPATCH1	100	74.225	ENSMLEG00000043840	GPATCH1	100	73.904	Mandrillus_leucophaeus
ENSHGLG00000009334	GPATCH1	81	54.188	ENSMZEG00005001926	gpatch1	82	54.037	Maylandia_zebra
ENSHGLG00000009334	GPATCH1	90	63.127	ENSMGAG00000005775	GPATCH1	89	63.952	Meleagris_gallopavo
ENSHGLG00000009334	GPATCH1	90	76.061	ENSMICG00000004829	GPATCH1	93	75.147	Microcebus_murinus
ENSHGLG00000009334	GPATCH1	99	79.914	ENSMOCG00000000174	Gpatch1	92	80.630	Microtus_ochrogaster
ENSHGLG00000009334	GPATCH1	83	50.306	ENSMMOG00000002140	gpatch1	89	51.108	Mola_mola
ENSHGLG00000009334	GPATCH1	91	71.194	ENSMODG00000012226	GPATCH1	100	70.094	Monodelphis_domestica
ENSHGLG00000009334	GPATCH1	99	47.741	ENSMALG00000014386	gpatch1	92	49.944	Monopterus_albus
ENSHGLG00000009334	GPATCH1	100	81.799	ENSMUSG00000063808	Gpatch1	100	92.857	Mus_musculus
ENSHGLG00000009334	GPATCH1	100	81.410	MGP_PahariEiJ_G0012816	Gpatch1	100	93.878	Mus_pahari
ENSHGLG00000009334	GPATCH1	100	81.370	MGP_SPRETEiJ_G0030681	Gpatch1	100	93.878	Mus_spretus
ENSHGLG00000009334	GPATCH1	100	84.154	ENSMPUG00000007658	GPATCH1	100	83.726	Mustela_putorius_furo
ENSHGLG00000009334	GPATCH1	100	83.833	ENSMLUG00000012161	GPATCH1	100	83.191	Myotis_lucifugus
ENSHGLG00000009334	GPATCH1	100	81.585	ENSNGAG00000012455	Gpatch1	100	81.906	Nannospalax_galili
ENSHGLG00000009334	GPATCH1	100	84.599	ENSNLEG00000007659	GPATCH1	100	84.278	Nomascus_leucogenys
ENSHGLG00000009334	GPATCH1	78	66.160	ENSMEUG00000015174	GPATCH1	77	66.160	Notamacropus_eugenii
ENSHGLG00000009334	GPATCH1	99	84.566	ENSODEG00000007103	GPATCH1	99	84.995	Octodon_degus
ENSHGLG00000009334	GPATCH1	81	55.141	ENSONIG00000003302	gpatch1	90	51.477	Oreochromis_niloticus
ENSHGLG00000009334	GPATCH1	99	68.342	ENSOANG00000012732	GPATCH1	99	68.206	Ornithorhynchus_anatinus
ENSHGLG00000009334	GPATCH1	100	83.529	ENSOCUG00000015905	GPATCH1	100	83.708	Oryctolagus_cuniculus
ENSHGLG00000009334	GPATCH1	89	50.357	ENSORLG00000018706	gpatch1	87	50.475	Oryzias_latipes
ENSHGLG00000009334	GPATCH1	89	49.410	ENSOMEG00000022688	gpatch1	89	50.943	Oryzias_melastigma
ENSHGLG00000009334	GPATCH1	83	86.136	ENSOGAG00000004016	GPATCH1	98	86.008	Otolemur_garnettii
ENSHGLG00000009334	GPATCH1	90	83.768	ENSOARG00000004365	GPATCH1	99	83.495	Ovis_aries
ENSHGLG00000009334	GPATCH1	100	84.492	ENSPPAG00000020990	GPATCH1	100	84.171	Pan_paniscus
ENSHGLG00000009334	GPATCH1	100	83.726	ENSPPRG00000017245	GPATCH1	100	83.405	Panthera_pardus
ENSHGLG00000009334	GPATCH1	100	84.475	ENSPTIG00000019649	GPATCH1	100	84.261	Panthera_tigris_altaica
ENSHGLG00000009334	GPATCH1	100	84.599	ENSPTRG00000010803	GPATCH1	100	84.278	Pan_troglodytes
ENSHGLG00000009334	GPATCH1	91	84.291	ENSPANG00000012374	GPATCH1	96	83.939	Papio_anubis
ENSHGLG00000009334	GPATCH1	81	55.239	ENSPKIG00000020745	gpatch1	79	55.120	Paramormyrops_kingsleyae
ENSHGLG00000009334	GPATCH1	99	63.041	ENSPSIG00000013433	GPATCH1	99	63.474	Pelodiscus_sinensis
ENSHGLG00000009334	GPATCH1	100	80.407	ENSPEMG00000000636	Gpatch1	100	80.407	Peromyscus_maniculatus_bairdii
ENSHGLG00000009334	GPATCH1	91	72.482	ENSPCIG00000021003	GPATCH1	95	72.706	Phascolarctos_cinereus
ENSHGLG00000009334	GPATCH1	71	50.149	ENSPREG00000008264	gpatch1	88	48.022	Poecilia_reticulata
ENSHGLG00000009334	GPATCH1	100	82.032	ENSPPYG00000009824	GPATCH1	100	81.925	Pongo_abelii
ENSHGLG00000009334	GPATCH1	83	73.113	ENSPCAG00000005931	GPATCH1	93	74.405	Procavia_capensis
ENSHGLG00000009334	GPATCH1	91	80.806	ENSPCOG00000009674	GPATCH1	96	80.166	Propithecus_coquereli
ENSHGLG00000009334	GPATCH1	84	83.880	ENSPVAG00000017767	GPATCH1	91	83.880	Pteropus_vampyrus
ENSHGLG00000009334	GPATCH1	81	55.256	ENSPNYG00000018189	gpatch1	91	54.944	Pundamilia_nyererei
ENSHGLG00000009334	GPATCH1	91	50.764	ENSPNAG00000013187	gpatch1	83	53.706	Pygocentrus_nattereri
ENSHGLG00000009334	GPATCH1	100	81.692	ENSRNOG00000011584	Gpatch1	100	81.799	Rattus_norvegicus
ENSHGLG00000009334	GPATCH1	100	76.603	ENSRBIG00000034723	GPATCH1	100	75.641	Rhinopithecus_bieti
ENSHGLG00000009334	GPATCH1	100	84.064	ENSRROG00000024428	GPATCH1	100	83.743	Rhinopithecus_roxellana
ENSHGLG00000009334	GPATCH1	100	84.171	ENSSBOG00000034650	GPATCH1	100	83.102	Saimiri_boliviensis_boliviensis
ENSHGLG00000009334	GPATCH1	99	71.306	ENSSHAG00000016016	GPATCH1	99	71.762	Sarcophilus_harrisii
ENSHGLG00000009334	GPATCH1	81	54.406	ENSSFOG00015011535	gpatch1	83	54.467	Scleropages_formosus
ENSHGLG00000009334	GPATCH1	99	45.010	ENSSMAG00000002883	gpatch1	93	46.587	Scophthalmus_maximus
ENSHGLG00000009334	GPATCH1	81	52.250	ENSSDUG00000007444	gpatch1	90	49.777	Seriola_dumerili
ENSHGLG00000009334	GPATCH1	81	52.196	ENSSLDG00000002856	gpatch1	91	52.696	Seriola_lalandi_dorsalis
ENSHGLG00000009334	GPATCH1	72	81.630	ENSSARG00000004108	GPATCH1	72	81.630	Sorex_araneus
ENSHGLG00000009334	GPATCH1	91	84.841	ENSSSCG00000002865	GPATCH1	94	84.724	Sus_scrofa
ENSHGLG00000009334	GPATCH1	92	63.121	ENSTGUG00000009401	GPATCH1	91	63.420	Taeniopygia_guttata
ENSHGLG00000009334	GPATCH1	81	52.163	ENSTRUG00000005785	-	90	49.765	Takifugu_rubripes
ENSHGLG00000009334	GPATCH1	81	52.356	ENSTRUG00000025081	gpatch1	90	50.059	Takifugu_rubripes
ENSHGLG00000009334	GPATCH1	80	52.995	ENSTNIG00000002554	gpatch1	98	53.621	Tetraodon_nigroviridis
ENSHGLG00000009334	GPATCH1	64	72.881	ENSTBEG00000007750	-	84	72.881	Tupaia_belangeri
ENSHGLG00000009334	GPATCH1	92	91.154	ENSTTRG00000012221	GPATCH1	89	91.154	Tursiops_truncatus
ENSHGLG00000009334	GPATCH1	91	84.316	ENSUMAG00000014645	GPATCH1	100	82.976	Ursus_maritimus
ENSHGLG00000009334	GPATCH1	80	94.000	ENSVPAG00000010313	GPATCH1	86	92.935	Vicugna_pacos
ENSHGLG00000009334	GPATCH1	94	84.589	ENSVVUG00000016572	GPATCH1	91	84.056	Vulpes_vulpes
ENSHGLG00000009334	GPATCH1	99	49.841	ENSXETG00000018276	gpatch1	94	53.146	Xenopus_tropicalis