EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000009353 (Gene tree)
Gene ID: -
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 87278 bases
Position: chrJH602127.1:10137548-10224825
Accession: 101717612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000013088	EST1	PF10374.9	1.5e-25	1	1
ENSHGLP00000013087	EST1	PF10374.9	1.7e-25	1	1
ENSHGLP00000013087	EST1_DNA_bind	PF10373.9	5.9e-56	1	1
ENSHGLP00000013088	EST1_DNA_bind	PF10373.9	6.1e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000013225	SMG7-202	3414	XM_013078919	ENSHGLP00000013088	1137 (aa)	XP_012934373	-
ENSHGLT00000013224	SMG7-201	3792	XM_004862811	ENSHGLP00000013087	1122 (aa)	XP_004862869	-

Gene Model

Click here to download ENSHGLG00000009353's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000009353's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000009353	SMG7	100	97.237	ENSG00000116698	SMG7	100	97.354	Homo_sapiens
ENSHGLG00000009353	SMG7	88	74.433	ENSAPOG00000009611	smg7	95	74.433	Acanthochromis_polyacanthus
ENSHGLG00000009353	SMG7	99	96.368	ENSAMEG00000002357	SMG7	99	96.368	Ailuropoda_melanoleuca
ENSHGLG00000009353	SMG7	97	64.082	ENSACIG00000015152	smg7	100	64.706	Amphilophus_citrinellus
ENSHGLG00000009353	SMG7	99	66.382	ENSAOCG00000013538	smg7	99	66.838	Amphiprion_ocellaris
ENSHGLG00000009353	SMG7	99	66.239	ENSAPEG00000007851	smg7	99	66.695	Amphiprion_percula
ENSHGLG00000009353	SMG7	99	65.959	ENSATEG00000006931	smg7	99	66.469	Anabas_testudineus
ENSHGLG00000009353	SMG7	100	88.276	ENSAPLG00000015811	SMG7	100	88.101	Anas_platyrhynchos
ENSHGLG00000009353	SMG7	100	84.211	ENSACAG00000014989	SMG7	100	83.793	Anolis_carolinensis
ENSHGLG00000009353	SMG7	100	96.834	ENSANAG00000028114	SMG7	100	96.834	Aotus_nancymaae
ENSHGLG00000009353	SMG7	99	65.336	ENSACLG00000022079	smg7	99	66.410	Astatotilapia_calliptera
ENSHGLG00000009353	SMG7	99	67.565	ENSAMXG00000020809	smg7	99	67.854	Astyanax_mexicanus
ENSHGLG00000009353	SMG7	100	95.811	ENSBTAG00000008003	SMG7	100	95.339	Bos_taurus
ENSHGLG00000009353	SMG7	100	96.791	ENSCJAG00000005135	SMG7	100	96.746	Callithrix_jacchus
ENSHGLG00000009353	SMG7	100	96.613	ENSCAFG00000013276	SMG7	96	96.613	Canis_familiaris
ENSHGLG00000009353	SMG7	100	96.613	ENSCAFG00020015475	SMG7	99	95.487	Canis_lupus_dingo
ENSHGLG00000009353	SMG7	100	96.078	ENSCHIG00000018192	SMG7	98	96.078	Capra_hircus
ENSHGLG00000009353	SMG7	100	96.613	ENSTSYG00000002667	SMG7	100	96.570	Carlito_syrichta
ENSHGLG00000009353	SMG7	100	97.950	ENSCPOG00000008906	SMG7	99	97.948	Cavia_porcellus
ENSHGLG00000009353	SMG7	100	97.098	ENSCCAG00000028596	SMG7	100	97.098	Cebus_capucinus
ENSHGLG00000009353	SMG7	100	97.415	ENSCATG00000011063	SMG7	100	97.361	Cercocebus_atys
ENSHGLG00000009353	SMG7	100	97.683	ENSCLAG00000010751	SMG7	100	97.098	Chinchilla_lanigera
ENSHGLG00000009353	SMG7	100	97.237	ENSCSAG00000012654	SMG7	96	97.237	Chlorocebus_sabaeus
ENSHGLG00000009353	SMG7	93	88.539	ENSCHOG00000010522	SMG7	93	88.921	Choloepus_hoffmanni
ENSHGLG00000009353	SMG7	100	91.060	ENSCPBG00000015724	SMG7	100	90.885	Chrysemys_picta_bellii
ENSHGLG00000009353	SMG7	99	97.252	ENSCANG00000015680	SMG7	99	97.252	Colobus_angolensis_palliatus
ENSHGLG00000009353	SMG7	100	95.722	ENSCGRG00001013705	Smg7	100	94.811	Cricetulus_griseus_chok1gshd
ENSHGLG00000009353	SMG7	100	95.722	ENSCGRG00000018401	Smg7	100	94.765	Cricetulus_griseus_crigri
ENSHGLG00000009353	SMG7	100	63.380	ENSCVAG00000011842	smg7	99	68.500	Cyprinodon_variegatus
ENSHGLG00000009353	SMG7	99	67.502	ENSDARG00000060767	smg7	99	67.384	Danio_rerio
ENSHGLG00000009353	SMG7	100	95.989	ENSDORG00000007331	Smg7	98	95.989	Dipodomys_ordii
ENSHGLG00000009353	SMG7	97	95.023	ENSETEG00000002654	SMG7	98	95.023	Echinops_telfairi
ENSHGLG00000009353	SMG7	100	97.237	ENSEASG00005006524	SMG7	98	97.237	Equus_asinus_asinus
ENSHGLG00000009353	SMG7	100	97.326	ENSECAG00000004313	SMG7	99	97.317	Equus_caballus
ENSHGLG00000009353	SMG7	97	96.033	ENSEEUG00000002024	SMG7	92	96.033	Erinaceus_europaeus
ENSHGLG00000009353	SMG7	93	76.383	ENSELUG00000010293	smg7	99	65.517	Esox_lucius
ENSHGLG00000009353	SMG7	100	96.970	ENSFCAG00000010900	SMG7	98	97.059	Felis_catus
ENSHGLG00000009353	SMG7	100	83.149	ENSFALG00000003047	SMG7	99	82.638	Ficedula_albicollis
ENSHGLG00000009353	SMG7	100	98.485	ENSFDAG00000012121	SMG7	99	98.485	Fukomys_damarensis
ENSHGLG00000009353	SMG7	99	64.812	ENSFHEG00000011073	smg7	99	65.325	Fundulus_heteroclitus
ENSHGLG00000009353	SMG7	89	67.064	ENSGMOG00000004916	smg7	91	67.064	Gadus_morhua
ENSHGLG00000009353	SMG7	100	88.636	ENSGALG00000004667	SMG7	100	88.462	Gallus_gallus
ENSHGLG00000009353	SMG7	99	64.914	ENSGAFG00000019000	smg7	99	64.741	Gambusia_affinis
ENSHGLG00000009353	SMG7	98	64.956	ENSGACG00000001634	smg7	98	64.867	Gasterosteus_aculeatus
ENSHGLG00000009353	SMG7	100	97.148	ENSGGOG00000002342	SMG7	100	97.098	Gorilla_gorilla
ENSHGLG00000009353	SMG7	100	64.411	ENSHBUG00000003726	smg7	96	72.081	Haplochromis_burtoni
ENSHGLG00000009353	SMG7	100	99.912	ENSHGLG00100009637	-	100	99.912	Heterocephalus_glaber_male
ENSHGLG00000009353	SMG7	100	91.176	ENSHGLG00100004878	-	98	91.176	Heterocephalus_glaber_male
ENSHGLG00000009353	SMG7	100	67.460	ENSIPUG00000016997	smg7	99	68.636	Ictalurus_punctatus
ENSHGLG00000009353	SMG7	100	97.415	ENSSTOG00000000401	SMG7	98	97.415	Ictidomys_tridecemlineatus
ENSHGLG00000009353	SMG7	100	95.009	ENSJJAG00000012351	Smg7	98	95.009	Jaculus_jaculus
ENSHGLG00000009353	SMG7	97	62.335	ENSKMAG00000004900	smg7	100	62.424	Kryptolebias_marmoratus
ENSHGLG00000009353	SMG7	99	66.005	ENSLBEG00000002983	smg7	99	66.437	Labrus_bergylta
ENSHGLG00000009353	SMG7	52	63.000	ENSLBEG00000005220	-	75	64.623	Labrus_bergylta
ENSHGLG00000009353	SMG7	100	75.044	ENSLACG00000000972	SMG7	99	74.913	Latimeria_chalumnae
ENSHGLG00000009353	SMG7	100	67.032	ENSLOCG00000002010	smg7	99	66.584	Lepisosteus_oculatus
ENSHGLG00000009353	SMG7	100	96.346	ENSLAFG00000008186	SMG7	98	96.346	Loxodonta_africana
ENSHGLG00000009353	SMG7	100	97.326	ENSMFAG00000031653	SMG7	98	97.326	Macaca_fascicularis
ENSHGLG00000009353	SMG7	100	97.415	ENSMMUG00000018458	SMG7	99	96.457	Macaca_mulatta
ENSHGLG00000009353	SMG7	100	97.361	ENSMNEG00000034798	SMG7	100	97.361	Macaca_nemestrina
ENSHGLG00000009353	SMG7	100	97.415	ENSMLEG00000037170	SMG7	100	97.361	Mandrillus_leucophaeus
ENSHGLG00000009353	SMG7	88	65.634	ENSMAMG00000018733	smg7	85	65.861	Mastacembelus_armatus
ENSHGLG00000009353	SMG7	99	65.897	ENSMZEG00005015247	smg7	99	66.324	Maylandia_zebra
ENSHGLG00000009353	SMG7	97	88.410	ENSMGAG00000001561	SMG7	98	88.230	Meleagris_gallopavo
ENSHGLG00000009353	SMG7	100	96.168	ENSMAUG00000019484	Smg7	99	96.253	Mesocricetus_auratus
ENSHGLG00000009353	SMG7	100	97.237	ENSMICG00000007145	SMG7	100	97.186	Microcebus_murinus
ENSHGLG00000009353	SMG7	100	95.989	ENSMOCG00000020748	Smg7	100	95.075	Microtus_ochrogaster
ENSHGLG00000009353	SMG7	99	64.645	ENSMMOG00000001524	smg7	99	65.022	Mola_mola
ENSHGLG00000009353	SMG7	92	92.505	ENSMODG00000007139	SMG7	99	92.505	Monodelphis_domestica
ENSHGLG00000009353	SMG7	97	67.980	ENSMALG00000000061	smg7	92	67.980	Monopterus_albus
ENSHGLG00000009353	SMG7	100	95.722	MGP_CAROLIEiJ_G0014704	Smg7	100	94.371	Mus_caroli
ENSHGLG00000009353	SMG7	100	95.633	ENSMUSG00000042772	Smg7	100	94.635	Mus_musculus
ENSHGLG00000009353	SMG7	100	95.633	MGP_PahariEiJ_G0027940	Smg7	100	94.547	Mus_pahari
ENSHGLG00000009353	SMG7	100	95.722	MGP_SPRETEiJ_G0015511	Smg7	100	94.723	Mus_spretus
ENSHGLG00000009353	SMG7	100	96.881	ENSMPUG00000011732	SMG7	97	96.881	Mustela_putorius_furo
ENSHGLG00000009353	SMG7	100	96.078	ENSMLUG00000015417	SMG7	98	96.078	Myotis_lucifugus
ENSHGLG00000009353	SMG7	100	96.078	ENSNGAG00000009836	Smg7	100	95.075	Nannospalax_galili
ENSHGLG00000009353	SMG7	98	61.304	ENSNBRG00000024343	smg7	98	70.000	Neolamprologus_brichardi
ENSHGLG00000009353	SMG7	100	97.415	ENSNLEG00000018018	SMG7	100	97.361	Nomascus_leucogenys
ENSHGLG00000009353	SMG7	78	86.421	ENSMEUG00000004681	SMG7	73	92.683	Notamacropus_eugenii
ENSHGLG00000009353	SMG7	97	83.779	ENSOPRG00000013942	SMG7	95	83.502	Ochotona_princeps
ENSHGLG00000009353	SMG7	100	97.683	ENSODEG00000010390	SMG7	100	97.537	Octodon_degus
ENSHGLG00000009353	SMG7	99	64.945	ENSONIG00000000277	smg7	99	66.012	Oreochromis_niloticus
ENSHGLG00000009353	SMG7	100	90.506	ENSOANG00000000994	SMG7	99	90.772	Ornithorhynchus_anatinus
ENSHGLG00000009353	SMG7	100	89.572	ENSOCUG00000005887	SMG7	91	89.750	Oryctolagus_cuniculus
ENSHGLG00000009353	SMG7	99	63.762	ENSORLG00000007314	smg7	70	93.421	Oryzias_latipes
ENSHGLG00000009353	SMG7	99	64.193	ENSORLG00020015779	smg7	70	93.421	Oryzias_latipes_hni
ENSHGLG00000009353	SMG7	100	64.497	ENSORLG00015012289	smg7	99	63.801	Oryzias_latipes_hsok
ENSHGLG00000009353	SMG7	100	62.574	ENSOMEG00000002328	smg7	99	62.130	Oryzias_melastigma
ENSHGLG00000009353	SMG7	97	95.392	ENSOGAG00000003107	SMG7	92	95.300	Otolemur_garnettii
ENSHGLG00000009353	SMG7	100	95.989	ENSOARG00000001352	SMG7	96	95.989	Ovis_aries
ENSHGLG00000009353	SMG7	100	97.361	ENSPPAG00000031619	SMG7	100	97.361	Pan_paniscus
ENSHGLG00000009353	SMG7	100	97.059	ENSPPRG00000011222	SMG7	100	96.922	Panthera_pardus
ENSHGLG00000009353	SMG7	97	97.051	ENSPTIG00000007242	SMG7	100	93.188	Panthera_tigris_altaica
ENSHGLG00000009353	SMG7	100	97.361	ENSPTRG00000001764	SMG7	100	97.361	Pan_troglodytes
ENSHGLG00000009353	SMG7	100	97.415	ENSPANG00000004520	SMG7	100	97.361	Papio_anubis
ENSHGLG00000009353	SMG7	99	64.474	ENSPKIG00000007242	smg7	98	67.500	Paramormyrops_kingsleyae
ENSHGLG00000009353	SMG7	100	91.006	ENSPSIG00000012201	SMG7	100	89.554	Pelodiscus_sinensis
ENSHGLG00000009353	SMG7	71	43.602	ENSPMGG00000021833	smg7	89	57.000	Periophthalmus_magnuspinnatus
ENSHGLG00000009353	SMG7	100	94.920	ENSPEMG00000011315	Smg7	98	94.920	Peromyscus_maniculatus_bairdii
ENSHGLG00000009353	SMG7	100	92.970	ENSPCIG00000003786	SMG7	100	92.794	Phascolarctos_cinereus
ENSHGLG00000009353	SMG7	100	62.972	ENSPFOG00000019219	smg7	99	62.097	Poecilia_formosa
ENSHGLG00000009353	SMG7	99	65.030	ENSPLAG00000001446	smg7	99	64.858	Poecilia_latipinna
ENSHGLG00000009353	SMG7	96	64.324	ENSPMEG00000005218	smg7	99	64.146	Poecilia_mexicana
ENSHGLG00000009353	SMG7	87	62.018	ENSPREG00000019039	smg7	91	62.055	Poecilia_reticulata
ENSHGLG00000009353	SMG7	100	97.449	ENSPPYG00000000427	SMG7	100	97.449	Pongo_abelii
ENSHGLG00000009353	SMG7	97	84.686	ENSPCAG00000008360	SMG7	94	84.686	Procavia_capensis
ENSHGLG00000009353	SMG7	100	97.326	ENSPCOG00000011996	SMG7	100	93.492	Propithecus_coquereli
ENSHGLG00000009353	SMG7	92	91.165	ENSPVAG00000000851	SMG7	88	91.165	Pteropus_vampyrus
ENSHGLG00000009353	SMG7	99	65.893	ENSPNYG00000007643	smg7	99	66.180	Pundamilia_nyererei
ENSHGLG00000009353	SMG7	99	67.934	ENSPNAG00000011374	smg7	99	67.761	Pygocentrus_nattereri
ENSHGLG00000009353	SMG7	100	95.637	ENSRNOG00000027962	Smg7	100	95.767	Rattus_norvegicus
ENSHGLG00000009353	SMG7	100	97.326	ENSRBIG00000036316	SMG7	100	97.274	Rhinopithecus_bieti
ENSHGLG00000009353	SMG7	100	97.326	ENSRROG00000035719	SMG7	100	97.274	Rhinopithecus_roxellana
ENSHGLG00000009353	SMG7	100	96.881	ENSSBOG00000023454	SMG7	98	96.881	Saimiri_boliviensis_boliviensis
ENSHGLG00000009353	SMG7	100	92.625	ENSSHAG00000013147	SMG7	100	92.362	Sarcophilus_harrisii
ENSHGLG00000009353	SMG7	99	69.110	ENSSFOG00015017252	smg7	99	75.661	Scleropages_formosus
ENSHGLG00000009353	SMG7	99	65.919	ENSSMAG00000006067	smg7	99	65.891	Scophthalmus_maximus
ENSHGLG00000009353	SMG7	96	71.368	ENSSDUG00000017543	smg7	99	66.019	Seriola_dumerili
ENSHGLG00000009353	SMG7	99	89.399	ENSSPUG00000002064	SMG7	99	89.223	Sphenodon_punctatus
ENSHGLG00000009353	SMG7	100	65.976	ENSSPAG00000008733	smg7	100	65.891	Stegastes_partitus
ENSHGLG00000009353	SMG7	100	96.881	ENSSSCG00000015558	SMG7	98	96.881	Sus_scrofa
ENSHGLG00000009353	SMG7	99	88.722	ENSTGUG00000003928	SMG7	100	88.634	Taeniopygia_guttata
ENSHGLG00000009353	SMG7	100	63.698	ENSTNIG00000002802	smg7	98	63.621	Tetraodon_nigroviridis
ENSHGLG00000009353	SMG7	77	94.492	ENSTBEG00000003220	SMG7	74	94.492	Tupaia_belangeri
ENSHGLG00000009353	SMG7	97	96.498	ENSTTRG00000014778	SMG7	93	96.498	Tursiops_truncatus
ENSHGLG00000009353	SMG7	98	91.902	ENSUAMG00000017473	SMG7	100	92.877	Ursus_americanus
ENSHGLG00000009353	SMG7	98	96.997	ENSUMAG00000016389	SMG7	100	96.997	Ursus_maritimus
ENSHGLG00000009353	SMG7	100	96.702	ENSVVUG00000008976	SMG7	98	96.706	Vulpes_vulpes
ENSHGLG00000009353	SMG7	100	71.169	ENSXETG00000012528	smg7	100	70.945	Xenopus_tropicalis
ENSHGLG00000009353	SMG7	99	64.893	ENSXMAG00000007123	smg7	99	65.064	Xiphophorus_maculatus