EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000009541 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 15766 bases
Position: chrJH602080.1:21606065-21621830
Accession: 101711802
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000013349	KH_1	PF00013.29	2.4e-07	1	1
ENSHGLP00000013348	KH_1	PF00013.29	2.8e-07	1	1
ENSHGLP00000013349	zf-CCHC	PF00098.23	0.00014	1	1
ENSHGLP00000013348	zf-CCHC	PF00098.23	0.00018	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000013489	SF1-202	2798	XM_004852464	ENSHGLP00000013349	571 (aa)	XP_004852521	UPI00034F71B8
ENSHGLT00000013488	SF1-201	3002	XM_004852462	ENSHGLP00000013348	638 (aa)	XP_004852520	UPI00034FEA12

Gene Model

Click here to download ENSHGLG00000009541's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000009541's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000009541	SF1	66	80.928	ENSAPOG00000012341	sf1	60	75.814	Acanthochromis_polyacanthus
ENSHGLG00000009541	SF1	99	91.602	ENSAMEG00000017828	SF1	83	99.812	Ailuropoda_melanoleuca
ENSHGLG00000009541	SF1	65	82.713	ENSACIG00000016514	sf1	62	78.043	Amphilophus_citrinellus
ENSHGLG00000009541	SF1	66	80.412	ENSAOCG00000010934	sf1	61	75.878	Amphiprion_ocellaris
ENSHGLG00000009541	SF1	66	80.412	ENSAPEG00000009498	sf1	61	75.878	Amphiprion_percula
ENSHGLG00000009541	SF1	65	81.579	ENSATEG00000001894	sf1	60	77.327	Anabas_testudineus
ENSHGLG00000009541	SF1	100	99.687	ENSANAG00000026664	-	100	99.687	Aotus_nancymaae
ENSHGLG00000009541	SF1	92	88.205	ENSANAG00000022607	-	99	86.622	Aotus_nancymaae
ENSHGLG00000009541	SF1	64	84.282	ENSACLG00000007633	sf1	61	79.562	Astatotilapia_calliptera
ENSHGLG00000009541	SF1	64	86.096	ENSAMXG00000003630	sf1	50	79.218	Astyanax_mexicanus
ENSHGLG00000009541	SF1	94	99.666	ENSBTAG00000001035	SF1	94	99.666	Bos_taurus
ENSHGLG00000009541	SF1	100	99.843	ENSCJAG00000002780	SF1	100	99.843	Callithrix_jacchus
ENSHGLG00000009541	SF1	100	99.843	ENSCAFG00000014239	SF1	100	99.843	Canis_familiaris
ENSHGLG00000009541	SF1	100	99.843	ENSCAFG00020014381	SF1	100	99.843	Canis_lupus_dingo
ENSHGLG00000009541	SF1	94	99.666	ENSCHIG00000025867	SF1	97	99.622	Capra_hircus
ENSHGLG00000009541	SF1	53	98.925	ENSTSYG00000033618	SF1	82	98.925	Carlito_syrichta
ENSHGLG00000009541	SF1	98	98.393	ENSCAPG00000010762	SF1	100	98.393	Cavia_aperea
ENSHGLG00000009541	SF1	98	99.522	ENSCPOG00000012290	SF1	100	99.522	Cavia_porcellus
ENSHGLG00000009541	SF1	89	85.289	ENSCCAG00000023781	-	94	85.159	Cebus_capucinus
ENSHGLG00000009541	SF1	100	99.843	ENSCCAG00000037881	SF1	100	99.843	Cebus_capucinus
ENSHGLG00000009541	SF1	100	99.843	ENSCATG00000011564	SF1	100	99.843	Cercocebus_atys
ENSHGLG00000009541	SF1	83	99.622	ENSCSAG00000007258	SF1	97	99.622	Chlorocebus_sabaeus
ENSHGLG00000009541	SF1	72	93.689	ENSCHOG00000006008	SF1	79	93.780	Choloepus_hoffmanni
ENSHGLG00000009541	SF1	81	86.486	ENSCPBG00000023763	SF1	66	85.135	Chrysemys_picta_bellii
ENSHGLG00000009541	SF1	64	59.946	ENSCING00000005564	-	74	60.372	Ciona_intestinalis
ENSHGLG00000009541	SF1	90	47.746	ENSCSAVG00000009055	-	88	55.014	Ciona_savignyi
ENSHGLG00000009541	SF1	100	99.843	ENSCANG00000042201	SF1	100	99.843	Colobus_angolensis_palliatus
ENSHGLG00000009541	SF1	100	97.548	ENSCGRG00001003677	Sf1	100	97.548	Cricetulus_griseus_chok1gshd
ENSHGLG00000009541	SF1	98	97.500	ENSCGRG00000001708	Sf1	100	97.500	Cricetulus_griseus_crigri
ENSHGLG00000009541	SF1	69	78.325	ENSCSEG00000014375	sf1	57	76.513	Cynoglossus_semilaevis
ENSHGLG00000009541	SF1	65	84.324	ENSCVAG00000001670	sf1	63	78.973	Cyprinodon_variegatus
ENSHGLG00000009541	SF1	70	81.390	ENSDARG00000008188	sf1	72	78.788	Danio_rerio
ENSHGLG00000009541	SF1	83	99.055	ENSDNOG00000001282	SF1	97	99.055	Dasypus_novemcinctus
ENSHGLG00000009541	SF1	100	99.687	ENSDORG00000016334	Sf1	100	99.687	Dipodomys_ordii
ENSHGLG00000009541	SF1	87	92.252	ENSETEG00000012830	SF1	82	91.453	Echinops_telfairi
ENSHGLG00000009541	SF1	83	99.244	ENSEASG00005018272	SF1	97	99.244	Equus_asinus_asinus
ENSHGLG00000009541	SF1	83	99.433	ENSECAG00000024544	SF1	97	99.433	Equus_caballus
ENSHGLG00000009541	SF1	69	99.237	ENSEEUG00000001058	SF1	100	99.237	Erinaceus_europaeus
ENSHGLG00000009541	SF1	65	81.432	ENSELUG00000013225	sf1	54	78.230	Esox_lucius
ENSHGLG00000009541	SF1	100	99.843	ENSFCAG00000012231	SF1	100	99.843	Felis_catus
ENSHGLG00000009541	SF1	98	99.286	ENSFDAG00000009833	SF1	100	99.286	Fukomys_damarensis
ENSHGLG00000009541	SF1	66	80.155	ENSFHEG00000022656	sf1	61	76.102	Fundulus_heteroclitus
ENSHGLG00000009541	SF1	58	87.941	ENSGMOG00000007469	sf1	62	87.941	Gadus_morhua
ENSHGLG00000009541	SF1	66	83.896	ENSGAFG00000019284	sf1	78	80.238	Gambusia_affinis
ENSHGLG00000009541	SF1	67	80.759	ENSGACG00000000826	sf1	68	76.722	Gasterosteus_aculeatus
ENSHGLG00000009541	SF1	74	89.623	ENSGAGG00000021691	SF1	72	85.135	Gopherus_agassizii
ENSHGLG00000009541	SF1	65	82.895	ENSHBUG00000011598	sf1	61	77.262	Haplochromis_burtoni
ENSHGLG00000009541	SF1	70	88.972	ENSHGLG00100008076	-	87	87.037	Heterocephalus_glaber_male
ENSHGLG00000009541	SF1	76	86.889	ENSHGLG00100008255	-	94	86.345	Heterocephalus_glaber_male
ENSHGLG00000009541	SF1	98	100.000	ENSHGLG00100013879	-	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000009541	SF1	66	81.088	ENSHCOG00000011388	sf1	58	76.755	Hippocampus_comes
ENSHGLG00000009541	SF1	98	99.522	ENSSTOG00000009790	-	100	99.522	Ictidomys_tridecemlineatus
ENSHGLG00000009541	SF1	98	82.562	ENSSTOG00000024353	-	98	83.452	Ictidomys_tridecemlineatus
ENSHGLG00000009541	SF1	100	99.530	ENSJJAG00000011788	Sf1	100	99.530	Jaculus_jaculus
ENSHGLG00000009541	SF1	67	82.398	ENSKMAG00000005854	sf1	63	77.283	Kryptolebias_marmoratus
ENSHGLG00000009541	SF1	65	82.461	ENSLBEG00000019836	sf1	64	78.230	Labrus_bergylta
ENSHGLG00000009541	SF1	73	78.333	ENSLACG00000018493	SF1	74	78.554	Latimeria_chalumnae
ENSHGLG00000009541	SF1	65	84.881	ENSLOCG00000002130	sf1	59	79.803	Lepisosteus_oculatus
ENSHGLG00000009541	SF1	99	95.814	ENSLAFG00000007201	SF1	100	95.814	Loxodonta_africana
ENSHGLG00000009541	SF1	100	99.843	ENSMFAG00000033122	SF1	100	99.843	Macaca_fascicularis
ENSHGLG00000009541	SF1	100	99.843	ENSMMUG00000022606	SF1	100	99.843	Macaca_mulatta
ENSHGLG00000009541	SF1	100	95.745	ENSMNEG00000037901	SF1	100	95.745	Macaca_nemestrina
ENSHGLG00000009541	SF1	98	99.841	ENSMLEG00000040706	SF1	95	99.841	Mandrillus_leucophaeus
ENSHGLG00000009541	SF1	65	82.586	ENSMAMG00000001780	sf1	58	77.966	Mastacembelus_armatus
ENSHGLG00000009541	SF1	65	82.632	ENSMZEG00005009196	sf1	61	77.030	Maylandia_zebra
ENSHGLG00000009541	SF1	100	99.060	ENSMAUG00000014064	Sf1	100	99.060	Mesocricetus_auratus
ENSHGLG00000009541	SF1	100	99.530	ENSMICG00000001202	SF1	100	99.530	Microcebus_murinus
ENSHGLG00000009541	SF1	100	99.060	ENSMOCG00000022038	Sf1	100	99.060	Microtus_ochrogaster
ENSHGLG00000009541	SF1	65	81.720	ENSMMOG00000020474	sf1	60	76.399	Mola_mola
ENSHGLG00000009541	SF1	75	97.892	ENSMODG00000029407	SF1	97	94.407	Monodelphis_domestica
ENSHGLG00000009541	SF1	65	82.888	ENSMALG00000020521	sf1	68	76.359	Monopterus_albus
ENSHGLG00000009541	SF1	100	99.060	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSHGLG00000009541	SF1	100	99.060	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSHGLG00000009541	SF1	100	99.060	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSHGLG00000009541	SF1	100	99.060	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSHGLG00000009541	SF1	93	99.492	ENSMPUG00000012684	SF1	92	99.492	Mustela_putorius_furo
ENSHGLG00000009541	SF1	93	99.323	ENSMLUG00000015217	-	92	99.323	Myotis_lucifugus
ENSHGLG00000009541	SF1	79	94.013	ENSMLUG00000029800	-	78	94.934	Myotis_lucifugus
ENSHGLG00000009541	SF1	100	99.530	ENSNGAG00000005550	Sf1	100	99.530	Nannospalax_galili
ENSHGLG00000009541	SF1	65	83.690	ENSNBRG00000017606	sf1	60	79.562	Neolamprologus_brichardi
ENSHGLG00000009541	SF1	100	99.687	ENSNLEG00000005236	-	100	99.687	Nomascus_leucogenys
ENSHGLG00000009541	SF1	80	98.246	ENSMEUG00000013424	SF1	97	98.246	Notamacropus_eugenii
ENSHGLG00000009541	SF1	74	99.158	ENSOPRG00000005008	SF1	96	99.158	Ochotona_princeps
ENSHGLG00000009541	SF1	100	89.522	ENSODEG00000006102	-	100	87.673	Octodon_degus
ENSHGLG00000009541	SF1	65	82.895	ENSONIG00000015728	sf1	61	77.262	Oreochromis_niloticus
ENSHGLG00000009541	SF1	62	87.709	ENSOANG00000002909	SF1	96	87.724	Ornithorhynchus_anatinus
ENSHGLG00000009541	SF1	99	99.683	ENSOCUG00000026486	SF1	100	99.683	Oryctolagus_cuniculus
ENSHGLG00000009541	SF1	67	80.563	ENSORLG00000011853	sf1	58	76.739	Oryzias_latipes
ENSHGLG00000009541	SF1	68	79.250	ENSORLG00020011834	sf1	60	75.587	Oryzias_latipes_hni
ENSHGLG00000009541	SF1	65	80.366	ENSORLG00015012855	sf1	59	76.499	Oryzias_latipes_hsok
ENSHGLG00000009541	SF1	67	80.051	ENSOMEG00000005210	sf1	61	76.291	Oryzias_melastigma
ENSHGLG00000009541	SF1	100	99.687	ENSOGAG00000016196	SF1	100	99.687	Otolemur_garnettii
ENSHGLG00000009541	SF1	83	95.126	ENSOARG00000009166	SF1	97	95.126	Ovis_aries
ENSHGLG00000009541	SF1	99	96.203	ENSPPAG00000002799	-	100	96.203	Pan_paniscus
ENSHGLG00000009541	SF1	98	99.841	ENSPPRG00000013566	SF1	98	99.841	Panthera_pardus
ENSHGLG00000009541	SF1	99	90.442	ENSPTIG00000016141	SF1	99	89.317	Panthera_tigris_altaica
ENSHGLG00000009541	SF1	100	99.843	ENSPTRG00000003846	SF1	100	99.843	Pan_troglodytes
ENSHGLG00000009541	SF1	100	95.745	ENSPANG00000020754	SF1	97	99.622	Papio_anubis
ENSHGLG00000009541	SF1	58	78.824	ENSPKIG00000012116	sf1	88	74.499	Paramormyrops_kingsleyae
ENSHGLG00000009541	SF1	56	87.812	ENSPSIG00000003610	SF1	84	82.710	Pelodiscus_sinensis
ENSHGLG00000009541	SF1	100	99.216	ENSPEMG00000010463	Sf1	100	99.216	Peromyscus_maniculatus_bairdii
ENSHGLG00000009541	SF1	59	72.321	ENSPMAG00000008272	sf1	53	66.757	Petromyzon_marinus
ENSHGLG00000009541	SF1	100	98.119	ENSPCIG00000018173	SF1	100	98.119	Phascolarctos_cinereus
ENSHGLG00000009541	SF1	66	85.752	ENSPFOG00000013683	sf1	68	81.146	Poecilia_formosa
ENSHGLG00000009541	SF1	65	83.862	ENSPLAG00000018076	sf1	61	79.187	Poecilia_latipinna
ENSHGLG00000009541	SF1	65	83.862	ENSPMEG00000005726	sf1	62	79.426	Poecilia_mexicana
ENSHGLG00000009541	SF1	65	82.940	ENSPREG00000004155	sf1	59	78.708	Poecilia_reticulata
ENSHGLG00000009541	SF1	100	99.687	ENSPPYG00000003098	-	100	99.687	Pongo_abelii
ENSHGLG00000009541	SF1	82	97.909	ENSPCAG00000013631	SF1	78	97.909	Procavia_capensis
ENSHGLG00000009541	SF1	100	99.687	ENSPCOG00000027546	SF1	100	99.687	Propithecus_coquereli
ENSHGLG00000009541	SF1	82	97.909	ENSPVAG00000016938	SF1	79	97.909	Pteropus_vampyrus
ENSHGLG00000009541	SF1	65	82.632	ENSPNYG00000004673	sf1	59	78.199	Pundamilia_nyererei
ENSHGLG00000009541	SF1	65	85.450	ENSPNAG00000013072	sf1	59	79.805	Pygocentrus_nattereri
ENSHGLG00000009541	SF1	94	98.998	ENSRNOG00000021085	Sf1	94	98.998	Rattus_norvegicus
ENSHGLG00000009541	SF1	100	95.768	ENSRBIG00000042818	SF1	100	95.768	Rhinopithecus_bieti
ENSHGLG00000009541	SF1	100	97.198	ENSRROG00000045655	SF1	100	97.198	Rhinopithecus_roxellana
ENSHGLG00000009541	SF1	51	43.421	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSHGLG00000009541	SF1	93	78.947	ENSSBOG00000022267	-	99	81.731	Saimiri_boliviensis_boliviensis
ENSHGLG00000009541	SF1	71	91.951	ENSSHAG00000006841	SF1	75	93.171	Sarcophilus_harrisii
ENSHGLG00000009541	SF1	69	80.451	ENSSFOG00015021978	sf1	55	76.812	Scleropages_formosus
ENSHGLG00000009541	SF1	72	76.112	ENSSMAG00000007549	sf1	63	76.526	Scophthalmus_maximus
ENSHGLG00000009541	SF1	66	80.206	ENSSDUG00000003903	sf1	63	76.402	Seriola_dumerili
ENSHGLG00000009541	SF1	66	80.206	ENSSLDG00000013075	sf1	61	76.402	Seriola_lalandi_dorsalis
ENSHGLG00000009541	SF1	81	95.745	ENSSARG00000008180	SF1	100	95.745	Sorex_araneus
ENSHGLG00000009541	SF1	79	82.759	ENSSPUG00000012907	SF1	76	85.033	Sphenodon_punctatus
ENSHGLG00000009541	SF1	66	80.412	ENSSPAG00000019060	sf1	61	75.878	Stegastes_partitus
ENSHGLG00000009541	SF1	100	99.530	ENSSSCG00000013021	SF1	100	99.530	Sus_scrofa
ENSHGLG00000009541	SF1	84	62.799	ENSTNIG00000004820	sf1	80	70.023	Tetraodon_nigroviridis
ENSHGLG00000009541	SF1	72	92.576	ENSTBEG00000013133	SF1	66	92.544	Tupaia_belangeri
ENSHGLG00000009541	SF1	81	95.174	ENSTTRG00000008857	SF1	96	95.543	Tursiops_truncatus
ENSHGLG00000009541	SF1	76	96.488	ENSUAMG00000011977	SF1	92	96.488	Ursus_americanus
ENSHGLG00000009541	SF1	99	88.772	ENSUMAG00000007268	SF1	90	98.864	Ursus_maritimus
ENSHGLG00000009541	SF1	60	100.000	ENSVPAG00000011912	SF1	66	100.000	Vicugna_pacos
ENSHGLG00000009541	SF1	83	99.622	ENSVVUG00000028585	SF1	97	99.622	Vulpes_vulpes
ENSHGLG00000009541	SF1	93	68.852	ENSXETG00000008434	sf1	68	81.553	Xenopus_tropicalis
ENSHGLG00000009541	SF1	64	85.205	ENSXCOG00000003704	sf1	75	80.941	Xiphophorus_couchianus
ENSHGLG00000009541	SF1	65	83.377	ENSXMAG00000007822	sf1	61	79.426	Xiphophorus_maculatus