EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000009620 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: cold shock domain containing E1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 29042 bases
Position: chrJH602085.1:10370689-10399730
Accession: 101717101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000013456	CSD	PF00313.22	2.3e-67	1	4
ENSHGLP00000013456	CSD	PF00313.22	2.3e-67	2	4
ENSHGLP00000013456	CSD	PF00313.22	2.3e-67	3	4
ENSHGLP00000013456	CSD	PF00313.22	2.3e-67	4	4
ENSHGLP00000013455	CSD	PF00313.22	3e-67	1	4
ENSHGLP00000013455	CSD	PF00313.22	3e-67	2	4
ENSHGLP00000013455	CSD	PF00313.22	3e-67	3	4
ENSHGLP00000013455	CSD	PF00313.22	3e-67	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000013595	-	2235	XM_013075434	ENSHGLP00000013455	744 (aa)	-	-
ENSHGLT00000013596	-	2142	-	ENSHGLP00000013456	713 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000009620's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000009620's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000009620	-	100	84.584	ENSHGLG00000003829	-	100	84.316
ENSHGLG00000009620	-	99	79.467	ENSHGLG00000007471	-	98	79.067
ENSHGLG00000009620	-	100	74.436	ENSHGLG00000019549	-	100	74.436
ENSHGLG00000009620	-	98	74.833	ENSHGLG00000010039	-	100	74.388
ENSHGLG00000009620	-	99	79.042	ENSHGLG00000008555	-	100	78.743
ENSHGLG00000009620	-	99	80.795	ENSHGLG00000000650	-	99	80.795

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000009620	-	100	89.850	ENSG00000009307	CSDE1	100	100.000	Homo_sapiens
ENSHGLG00000009620	-	100	70.779	ENSAPOG00000015538	csde1	100	70.649	Acanthochromis_polyacanthus
ENSHGLG00000009620	-	100	88.136	ENSAMEG00000017129	CSDE1	94	87.875	Ailuropoda_melanoleuca
ENSHGLG00000009620	-	69	76.923	ENSACIG00000015175	csde1	99	76.923	Amphilophus_citrinellus
ENSHGLG00000009620	-	100	70.909	ENSAOCG00000011510	csde1	100	70.779	Amphiprion_ocellaris
ENSHGLG00000009620	-	100	70.909	ENSAPEG00000007194	csde1	100	70.779	Amphiprion_percula
ENSHGLG00000009620	-	100	70.779	ENSATEG00000003864	csde1	100	70.649	Anabas_testudineus
ENSHGLG00000009620	-	100	83.051	ENSAPLG00000008797	CSDE1	100	82.790	Anas_platyrhynchos
ENSHGLG00000009620	-	100	83.459	ENSACAG00000003120	CSDE1	100	82.957	Anolis_carolinensis
ENSHGLG00000009620	-	64	73.404	ENSANAG00000028396	-	89	74.150	Aotus_nancymaae
ENSHGLG00000009620	-	100	89.599	ENSANAG00000024665	CSDE1	94	93.448	Aotus_nancymaae
ENSHGLG00000009620	-	100	70.741	ENSACLG00000013296	csde1	100	70.351	Astatotilapia_calliptera
ENSHGLG00000009620	-	100	70.039	ENSAMXG00000007436	csde1	100	69.780	Astyanax_mexicanus
ENSHGLG00000009620	-	100	88.972	ENSBTAG00000000678	CSDE1	100	88.266	Bos_taurus
ENSHGLG00000009620	-	100	89.724	ENSCJAG00000012565	CSDE1	95	89.474	Callithrix_jacchus
ENSHGLG00000009620	-	98	89.096	ENSCAFG00000009618	CSDE1	94	88.830	Canis_familiaris
ENSHGLG00000009620	-	100	89.309	ENSCAFG00020000481	CSDE1	100	89.048	Canis_lupus_dingo
ENSHGLG00000009620	-	100	88.972	ENSCHIG00000017250	CSDE1	100	88.266	Capra_hircus
ENSHGLG00000009620	-	100	89.348	ENSTSYG00000003747	CSDE1	100	89.098	Carlito_syrichta
ENSHGLG00000009620	-	100	92.982	ENSCAPG00000015128	CSDE1	100	92.982	Cavia_aperea
ENSHGLG00000009620	-	100	84.712	ENSCPOG00000040388	CSDE1	100	84.461	Cavia_porcellus
ENSHGLG00000009620	-	95	61.616	ENSCCAG00000033677	-	99	61.045	Cebus_capucinus
ENSHGLG00000009620	-	96	60.356	ENSCCAG00000030878	-	91	60.134	Cebus_capucinus
ENSHGLG00000009620	-	100	89.724	ENSCCAG00000036794	CSDE1	100	89.474	Cebus_capucinus
ENSHGLG00000009620	-	100	89.850	ENSCATG00000036962	CSDE1	97	89.179	Cercocebus_atys
ENSHGLG00000009620	-	100	89.850	ENSCLAG00000006618	CSDE1	100	89.599	Chinchilla_lanigera
ENSHGLG00000009620	-	100	89.850	ENSCSAG00000001658	CSDE1	95	89.599	Chlorocebus_sabaeus
ENSHGLG00000009620	-	97	99.387	ENSCHOG00000000918	CSDE1	85	99.387	Choloepus_hoffmanni
ENSHGLG00000009620	-	100	83.584	ENSCPBG00000016547	CSDE1	100	83.333	Chrysemys_picta_bellii
ENSHGLG00000009620	-	97	40.147	ENSCING00000014465	-	96	39.902	Ciona_intestinalis
ENSHGLG00000009620	-	96	40.699	ENSCSAVG00000008100	-	98	40.449	Ciona_savignyi
ENSHGLG00000009620	-	99	75.697	ENSCANG00000031069	-	94	96.283	Colobus_angolensis_palliatus
ENSHGLG00000009620	-	100	89.850	ENSCANG00000035096	CSDE1	97	89.179	Colobus_angolensis_palliatus
ENSHGLG00000009620	-	100	73.907	ENSCGRG00001014011	-	100	73.907	Cricetulus_griseus_chok1gshd
ENSHGLG00000009620	-	100	89.474	ENSCGRG00001016833	-	100	89.223	Cricetulus_griseus_chok1gshd
ENSHGLG00000009620	-	100	86.087	ENSCGRG00000005831	-	100	86.087	Cricetulus_griseus_crigri
ENSHGLG00000009620	-	97	81.514	ENSCGRG00000002225	-	100	81.069	Cricetulus_griseus_crigri
ENSHGLG00000009620	-	100	70.221	ENSCSEG00000002620	csde1	100	70.091	Cynoglossus_semilaevis
ENSHGLG00000009620	-	100	70.000	ENSCVAG00000001344	csde1	100	69.610	Cyprinodon_variegatus
ENSHGLG00000009620	-	100	70.537	ENSDARG00000074758	csde1	100	77.143	Danio_rerio
ENSHGLG00000009620	-	78	46.538	ENSDNOG00000034464	-	100	71.304	Dasypus_novemcinctus
ENSHGLG00000009620	-	100	88.802	ENSDNOG00000010287	-	93	88.542	Dasypus_novemcinctus
ENSHGLG00000009620	-	100	88.972	ENSDORG00000011609	Csde1	100	88.722	Dipodomys_ordii
ENSHGLG00000009620	-	96	47.746	FBgn0263352	Unr	81	40.387	Drosophila_melanogaster
ENSHGLG00000009620	-	93	98.347	ENSETEG00000002491	-	74	98.347	Echinops_telfairi
ENSHGLG00000009620	-	81	82.975	ENSETEG00000006280	-	96	82.975	Echinops_telfairi
ENSHGLG00000009620	-	77	60.504	ENSETEG00000007109	-	99	60.336	Echinops_telfairi
ENSHGLG00000009620	-	99	70.976	ENSETEG00000013678	-	99	70.580	Echinops_telfairi
ENSHGLG00000009620	-	99	50.123	ENSEBUG00000008647	csde1	99	48.214	Eptatretus_burgeri
ENSHGLG00000009620	-	100	89.474	ENSEASG00005006284	CSDE1	100	89.223	Equus_asinus_asinus
ENSHGLG00000009620	-	100	89.614	ENSECAG00000020885	CSDE1	100	89.348	Equus_caballus
ENSHGLG00000009620	-	89	97.492	ENSEEUG00000006286	CSDE1	68	97.492	Erinaceus_europaeus
ENSHGLG00000009620	-	100	69.211	ENSELUG00000015507	csde1	100	68.952	Esox_lucius
ENSHGLG00000009620	-	100	89.724	ENSFCAG00000029266	CSDE1	100	89.048	Felis_catus
ENSHGLG00000009620	-	100	83.584	ENSFALG00000003407	CSDE1	100	83.333	Ficedula_albicollis
ENSHGLG00000009620	-	100	90.351	ENSFDAG00000007882	CSDE1	100	90.100	Fukomys_damarensis
ENSHGLG00000009620	-	100	70.162	ENSFHEG00000010799	csde1	100	69.913	Fundulus_heteroclitus
ENSHGLG00000009620	-	99	70.213	ENSGMOG00000012731	csde1	100	70.088	Gadus_morhua
ENSHGLG00000009620	-	98	83.504	ENSGALG00000002139	CSDE1	98	83.248	Gallus_gallus
ENSHGLG00000009620	-	80	73.411	ENSGAFG00000005241	csde1	93	73.411	Gambusia_affinis
ENSHGLG00000009620	-	99	71.375	ENSGACG00000004544	csde1	100	71.250	Gasterosteus_aculeatus
ENSHGLG00000009620	-	100	83.208	ENSGAGG00000017685	CSDE1	100	82.957	Gopherus_agassizii
ENSHGLG00000009620	-	100	89.850	ENSGGOG00000002164	CSDE1	100	89.179	Gorilla_gorilla
ENSHGLG00000009620	-	100	70.741	ENSHBUG00000020315	csde1	100	70.351	Haplochromis_burtoni
ENSHGLG00000009620	-	100	90.602	ENSHGLG00100019438	-	100	90.602	Heterocephalus_glaber_male
ENSHGLG00000009620	-	100	79.357	ENSHGLG00100012072	-	100	79.088	Heterocephalus_glaber_male
ENSHGLG00000009620	-	98	74.610	ENSHGLG00100006910	-	100	74.165	Heterocephalus_glaber_male
ENSHGLG00000009620	-	99	85.263	ENSHGLG00100002245	-	99	85.469	Heterocephalus_glaber_male
ENSHGLG00000009620	-	100	72.005	ENSHGLG00100001846	-	100	72.005	Heterocephalus_glaber_male
ENSHGLG00000009620	-	93	74.477	ENSHGLG00100004195	-	100	74.198	Heterocephalus_glaber_male
ENSHGLG00000009620	-	98	76.066	ENSHGLG00100004833	-	100	76.066	Heterocephalus_glaber_male
ENSHGLG00000009620	-	99	76.779	ENSHGLG00100007287	-	98	76.376	Heterocephalus_glaber_male
ENSHGLG00000009620	-	100	69.441	ENSHCOG00000004158	csde1	100	68.921	Hippocampus_comes
ENSHGLG00000009620	-	100	70.428	ENSIPUG00000000355	csde1	100	70.039	Ictalurus_punctatus
ENSHGLG00000009620	-	81	77.087	ENSSTOG00000032722	-	97	77.250	Ictidomys_tridecemlineatus
ENSHGLG00000009620	-	100	73.161	ENSSTOG00000030994	-	100	72.645	Ictidomys_tridecemlineatus
ENSHGLG00000009620	-	100	89.223	ENSJJAG00000019571	Csde1	100	88.972	Jaculus_jaculus
ENSHGLG00000009620	-	100	70.062	ENSKMAG00000005685	csde1	100	69.592	Kryptolebias_marmoratus
ENSHGLG00000009620	-	100	70.649	ENSLBEG00000014770	csde1	100	70.649	Labrus_bergylta
ENSHGLG00000009620	-	100	75.776	ENSLACG00000018452	CSDE1	94	76.025	Latimeria_chalumnae
ENSHGLG00000009620	-	100	73.342	ENSLOCG00000010413	csde1	94	73.091	Lepisosteus_oculatus
ENSHGLG00000009620	-	100	87.744	ENSLAFG00000007150	CSDE1	96	87.484	Loxodonta_africana
ENSHGLG00000009620	-	100	89.850	ENSMFAG00000003674	CSDE1	100	89.179	Macaca_fascicularis
ENSHGLG00000009620	-	100	89.850	ENSMMUG00000001974	CSDE1	100	89.179	Macaca_mulatta
ENSHGLG00000009620	-	100	89.850	ENSMNEG00000045247	CSDE1	97	89.179	Macaca_nemestrina
ENSHGLG00000009620	-	100	89.599	ENSMLEG00000038673	CSDE1	95	89.348	Mandrillus_leucophaeus
ENSHGLG00000009620	-	100	71.039	ENSMAMG00000008821	csde1	100	70.909	Mastacembelus_armatus
ENSHGLG00000009620	-	100	70.741	ENSMZEG00005021675	csde1	100	70.351	Maylandia_zebra
ENSHGLG00000009620	-	100	82.812	ENSMGAG00000016381	CSDE1	100	82.552	Meleagris_gallopavo
ENSHGLG00000009620	-	100	89.474	ENSMAUG00000014031	Csde1	100	89.223	Mesocricetus_auratus
ENSHGLG00000009620	-	100	88.972	ENSMICG00000002050	CSDE1	96	88.366	Microcebus_murinus
ENSHGLG00000009620	-	100	89.474	ENSMOCG00000018960	Csde1	100	89.223	Microtus_ochrogaster
ENSHGLG00000009620	-	100	70.649	ENSMMOG00000015075	csde1	100	70.519	Mola_mola
ENSHGLG00000009620	-	100	86.466	ENSMODG00000004685	CSDE1	100	86.216	Monodelphis_domestica
ENSHGLG00000009620	-	100	70.909	ENSMALG00000007132	csde1	100	70.779	Monopterus_albus
ENSHGLG00000009620	-	100	89.223	MGP_CAROLIEiJ_G0025444	Csde1	100	98.675	Mus_caroli
ENSHGLG00000009620	-	100	89.348	ENSMUSG00000068823	Csde1	100	98.675	Mus_musculus
ENSHGLG00000009620	-	100	89.599	MGP_PahariEiJ_G0026888	Csde1	100	98.675	Mus_pahari
ENSHGLG00000009620	-	100	89.599	MGP_SPRETEiJ_G0026394	Csde1	100	98.675	Mus_spretus
ENSHGLG00000009620	-	98	89.527	ENSMPUG00000005753	CSDE1	99	89.272	Mustela_putorius_furo
ENSHGLG00000009620	-	100	88.266	ENSMLUG00000005681	CSDE1	94	88.005	Myotis_lucifugus
ENSHGLG00000009620	-	96	62.212	ENSNGAG00000012599	-	100	62.069	Nannospalax_galili
ENSHGLG00000009620	-	100	89.724	ENSNGAG00000021929	Csde1	100	89.474	Nannospalax_galili
ENSHGLG00000009620	-	100	70.741	ENSNBRG00000020808	csde1	100	70.351	Neolamprologus_brichardi
ENSHGLG00000009620	-	100	89.724	ENSNLEG00000004842	CSDE1	94	92.759	Nomascus_leucogenys
ENSHGLG00000009620	-	98	96.117	ENSMEUG00000002677	CSDE1	96	96.117	Notamacropus_eugenii
ENSHGLG00000009620	-	98	97.087	ENSOPRG00000005002	CSDE1	76	97.087	Ochotona_princeps
ENSHGLG00000009620	-	96	58.782	ENSODEG00000005979	-	98	58.782	Octodon_degus
ENSHGLG00000009620	-	100	89.724	ENSODEG00000007383	-	100	89.474	Octodon_degus
ENSHGLG00000009620	-	100	68.987	ENSONIG00000009309	csde1	100	68.620	Oreochromis_niloticus
ENSHGLG00000009620	-	100	75.031	ENSOANG00000003346	-	100	75.342	Ornithorhynchus_anatinus
ENSHGLG00000009620	-	100	88.847	ENSOCUG00000016438	CSDE1	95	88.596	Oryctolagus_cuniculus
ENSHGLG00000009620	-	100	70.795	ENSORLG00000000707	csde1	100	70.665	Oryzias_latipes
ENSHGLG00000009620	-	100	70.375	ENSORLG00020005148	csde1	100	68.620	Oryzias_latipes_hni
ENSHGLG00000009620	-	100	70.795	ENSORLG00015019415	csde1	100	70.665	Oryzias_latipes_hsok
ENSHGLG00000009620	-	100	71.745	ENSOMEG00000015656	csde1	100	71.484	Oryzias_melastigma
ENSHGLG00000009620	-	100	89.439	ENSOGAG00000012127	CSDE1	94	89.179	Otolemur_garnettii
ENSHGLG00000009620	-	100	88.657	ENSOARG00000020034	CSDE1	94	88.396	Ovis_aries
ENSHGLG00000009620	-	100	89.850	ENSPPAG00000025861	CSDE1	100	89.179	Pan_paniscus
ENSHGLG00000009620	-	100	89.724	ENSPPRG00000006747	CSDE1	95	89.474	Panthera_pardus
ENSHGLG00000009620	-	100	89.724	ENSPTIG00000015468	CSDE1	100	89.474	Panthera_tigris_altaica
ENSHGLG00000009620	-	100	89.850	ENSPTRG00000033721	CSDE1	100	89.599	Pan_troglodytes
ENSHGLG00000009620	-	100	89.850	ENSPANG00000018873	CSDE1	100	89.179	Papio_anubis
ENSHGLG00000009620	-	100	70.351	ENSPKIG00000009459	csde1	100	69.961	Paramormyrops_kingsleyae
ENSHGLG00000009620	-	72	95.354	ENSPSIG00000003823	CSDE1	96	95.354	Pelodiscus_sinensis
ENSHGLG00000009620	-	100	70.260	ENSPMGG00000000772	csde1	100	69.870	Periophthalmus_magnuspinnatus
ENSHGLG00000009620	-	100	89.474	ENSPEMG00000020357	-	100	89.223	Peromyscus_maniculatus_bairdii
ENSHGLG00000009620	-	100	86.591	ENSPCIG00000022587	CSDE1	100	86.341	Phascolarctos_cinereus
ENSHGLG00000009620	-	98	68.156	ENSPFOG00000012664	csde1	100	67.391	Poecilia_formosa
ENSHGLG00000009620	-	97	63.134	ENSPLAG00000017680	csde1	93	62.673	Poecilia_latipinna
ENSHGLG00000009620	-	98	63.126	ENSPMEG00000005094	csde1	96	62.974	Poecilia_mexicana
ENSHGLG00000009620	-	100	69.565	ENSPREG00000011631	csde1	100	67.347	Poecilia_reticulata
ENSHGLG00000009620	-	100	89.724	ENSPPYG00000000996	CSDE1	100	89.474	Pongo_abelii
ENSHGLG00000009620	-	100	98.058	ENSPCAG00000014368	CSDE1	90	98.058	Procavia_capensis
ENSHGLG00000009620	-	71	84.328	ENSPCOG00000008223	-	91	82.847	Propithecus_coquereli
ENSHGLG00000009620	-	100	89.474	ENSPCOG00000017893	CSDE1	100	89.223	Propithecus_coquereli
ENSHGLG00000009620	-	100	83.181	ENSPVAG00000008225	CSDE1	95	82.920	Pteropus_vampyrus
ENSHGLG00000009620	-	100	70.741	ENSPNYG00000013745	csde1	100	70.351	Pundamilia_nyererei
ENSHGLG00000009620	-	100	70.221	ENSPNAG00000001958	csde1	100	69.961	Pygocentrus_nattereri
ENSHGLG00000009620	-	100	89.474	ENSRNOG00000061058	Csde1	100	89.223	Rattus_norvegicus
ENSHGLG00000009620	-	100	83.980	ENSRBIG00000038966	-	94	83.730	Rhinopithecus_bieti
ENSHGLG00000009620	-	100	86.466	ENSRBIG00000038088	-	100	85.417	Rhinopithecus_bieti
ENSHGLG00000009620	-	100	89.850	ENSRROG00000043101	CSDE1	97	89.179	Rhinopithecus_roxellana
ENSHGLG00000009620	-	100	89.724	ENSSBOG00000035592	CSDE1	95	89.474	Saimiri_boliviensis_boliviensis
ENSHGLG00000009620	-	100	85.919	ENSSHAG00000009831	CSDE1	100	85.658	Sarcophilus_harrisii
ENSHGLG00000009620	-	100	70.481	ENSSFOG00015007498	csde1	100	70.091	Scleropages_formosus
ENSHGLG00000009620	-	100	71.169	ENSSMAG00000007203	csde1	100	70.909	Scophthalmus_maximus
ENSHGLG00000009620	-	100	70.649	ENSSDUG00000015380	csde1	100	70.519	Seriola_dumerili
ENSHGLG00000009620	-	100	70.649	ENSSLDG00000008819	csde1	100	70.519	Seriola_lalandi_dorsalis
ENSHGLG00000009620	-	100	88.136	ENSSARG00000000738	CSDE1	94	87.875	Sorex_araneus
ENSHGLG00000009620	-	100	83.709	ENSSPUG00000008714	CSDE1	100	82.832	Sphenodon_punctatus
ENSHGLG00000009620	-	100	70.909	ENSSPAG00000000716	csde1	100	70.779	Stegastes_partitus
ENSHGLG00000009620	-	100	89.474	ENSSSCG00000006752	CSDE1	100	88.787	Sus_scrofa
ENSHGLG00000009620	-	100	82.625	ENSTGUG00000000972	CSDE1	100	82.375	Taeniopygia_guttata
ENSHGLG00000009620	-	100	67.620	ENSTRUG00000007996	csde1	100	67.620	Takifugu_rubripes
ENSHGLG00000009620	-	73	80.989	ENSTNIG00000010878	csde1	100	80.989	Tetraodon_nigroviridis
ENSHGLG00000009620	-	100	88.266	ENSTTRG00000015583	CSDE1	94	88.005	Tursiops_truncatus
ENSHGLG00000009620	-	71	99.674	ENSUAMG00000021779	-	100	99.035	Ursus_americanus
ENSHGLG00000009620	-	87	83.253	ENSUAMG00000024289	-	99	82.931	Ursus_americanus
ENSHGLG00000009620	-	97	81.235	ENSUMAG00000011714	-	99	80.760	Ursus_maritimus
ENSHGLG00000009620	-	100	82.269	ENSUMAG00000009720	-	97	82.008	Ursus_maritimus
ENSHGLG00000009620	-	97	97.897	ENSVPAG00000000749	CSDE1	79	97.897	Vicugna_pacos
ENSHGLG00000009620	-	81	93.407	ENSVVUG00000009890	CSDE1	87	93.407	Vulpes_vulpes
ENSHGLG00000009620	-	100	78.402	ENSXETG00000021448	csde1	93	87.826	Xenopus_tropicalis
ENSHGLG00000009620	-	92	66.515	ENSXCOG00000000035	csde1	99	66.365	Xiphophorus_couchianus
ENSHGLG00000009620	-	100	70.500	ENSXMAG00000009080	csde1	100	68.447	Xiphophorus_maculatus