EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000009991 (Gene tree)
Gene ID: -
Gene Symbol: RBM4
Alias: LARK|RBM4A|ZCCHC21|ZCRB3A
Full Name: RNA-binding protein 4
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 26014 bases
Position: chrJH602080.1:19766645-19792658
Accession: 101715235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000013992	zf-CCHC	PF00098.23	1.7e-07	1	1
ENSHGLP00000013994	zf-CCHC	PF00098.23	1.7e-07	1	1
ENSHGLP00000013992	RRM_5	PF13893.6	2.7e-08	1	2
ENSHGLP00000013992	RRM_5	PF13893.6	2.7e-08	2	2
ENSHGLP00000013994	RRM_5	PF13893.6	2.7e-08	1	2
ENSHGLP00000013994	RRM_5	PF13893.6	2.7e-08	2	2
ENSHGLP00000013993	RRM_5	PF13893.6	1.2e-06	1	1
ENSHGLP00000013993	RRM_1	PF00076.22	1.4e-34	1	2
ENSHGLP00000013993	RRM_1	PF00076.22	1.4e-34	2	2
ENSHGLP00000013992	RRM_1	PF00076.22	1.8e-34	1	2
ENSHGLP00000013992	RRM_1	PF00076.22	1.8e-34	2	2
ENSHGLP00000013994	RRM_1	PF00076.22	1.8e-34	1	2
ENSHGLP00000013994	RRM_1	PF00076.22	1.8e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000014136	RBM4-202	1060	XM_013074759	ENSHGLP00000013993	143 (aa)	XP_012930213	UPI00034F94D4
ENSHGLT00000014137	RBM4-203	1321	XM_004852281	ENSHGLP00000013994	365 (aa)	XP_004852338	UPI00034F4CE4
ENSHGLT00000014135	RBM4-201	2792	XM_004852282	ENSHGLP00000013992	365 (aa)	XP_004852339	UPI00034F4CE4

Gene Model

Click here to download ENSHGLG00000009991's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000009991's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000009991	RBM4	97	89.130	ENSHGLG00000002853	-	100	73.151
ENSHGLG00000009991	RBM4	95	30.128	ENSHGLG00000005927	TIA1	85	30.128
ENSHGLG00000009991	RBM4	50	32.500	ENSHGLG00000011055	RBMX	78	32.500
ENSHGLG00000009991	RBM4	97	65.942	ENSHGLG00000000117	-	95	65.205
ENSHGLG00000009991	RBM4	94	30.065	ENSHGLG00000000485	ELAVL4	85	30.065
ENSHGLG00000009991	RBM4	97	99.275	ENSHGLG00000016412	-	100	87.123
ENSHGLG00000009991	RBM4	100	93.007	ENSHGLG00000007708	-	98	93.007
ENSHGLG00000009991	RBM4	98	78.571	ENSHGLG00000003890	-	96	78.571
ENSHGLG00000009991	RBM4	97	89.130	ENSHGLG00000007536	-	100	71.507
ENSHGLG00000009991	RBM4	52	34.667	ENSHGLG00000007348	SRSF6	56	34.667
ENSHGLG00000009991	RBM4	97	45.000	ENSHGLG00000012589	RBM14	94	41.071

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000009991	RBM4	100	98.601	ENSG00000173933	RBM4	100	98.601	Homo_sapiens
ENSHGLG00000009991	RBM4	99	72.404	ENSG00000248643	RBM14-RBM4	100	73.224	Homo_sapiens
ENSHGLG00000009991	RBM4	98	98.571	ENSG00000173914	RBM4B	98	98.571	Homo_sapiens
ENSHGLG00000009991	RBM4	97	99.275	ENSAMEG00000010906	RBM4B	100	87.397	Ailuropoda_melanoleuca
ENSHGLG00000009991	RBM4	100	98.356	ENSAMEG00000010914	RBM4	100	98.356	Ailuropoda_melanoleuca
ENSHGLG00000009991	RBM4	100	95.804	ENSANAG00000033986	-	87	95.804	Aotus_nancymaae
ENSHGLG00000009991	RBM4	98	98.571	ENSANAG00000023478	RBM4B	98	98.571	Aotus_nancymaae
ENSHGLG00000009991	RBM4	100	96.986	ENSBTAG00000031688	RBM4	100	96.986	Bos_taurus
ENSHGLG00000009991	RBM4	97	99.275	ENSBTAG00000000423	RBM4B	100	87.671	Bos_taurus
ENSHGLG00000009991	RBM4	98	98.571	ENSCJAG00000013666	RBM4B	98	98.571	Callithrix_jacchus
ENSHGLG00000009991	RBM4	97	99.275	ENSCAFG00000012378	RBM4B	100	87.123	Canis_familiaris
ENSHGLG00000009991	RBM4	100	98.356	ENSCAFG00000012388	RBM4	100	98.356	Canis_familiaris
ENSHGLG00000009991	RBM4	100	98.356	ENSCAFG00020015515	RBM4	100	98.356	Canis_lupus_dingo
ENSHGLG00000009991	RBM4	97	99.275	ENSCAFG00020015519	RBM4B	100	87.123	Canis_lupus_dingo
ENSHGLG00000009991	RBM4	100	96.986	ENSCHIG00000020613	RBM4	100	96.986	Capra_hircus
ENSHGLG00000009991	RBM4	97	99.275	ENSCHIG00000008907	RBM4B	100	87.671	Capra_hircus
ENSHGLG00000009991	RBM4	94	86.916	ENSTSYG00000036168	-	86	86.916	Carlito_syrichta
ENSHGLG00000009991	RBM4	66	78.423	ENSTSYG00000009580	RBM4B	96	77.593	Carlito_syrichta
ENSHGLG00000009991	RBM4	97	99.275	ENSCAPG00000009570	RBM4B	100	87.123	Cavia_aperea
ENSHGLG00000009991	RBM4	100	99.301	ENSCAPG00000016600	RBM4	100	99.301	Cavia_aperea
ENSHGLG00000009991	RBM4	97	99.275	ENSCPOG00000013689	RBM4B	100	87.123	Cavia_porcellus
ENSHGLG00000009991	RBM4	100	99.301	ENSCPOG00000013194	RBM4	100	99.301	Cavia_porcellus
ENSHGLG00000009991	RBM4	99	71.831	ENSCCAG00000023319	-	100	73.134	Cebus_capucinus
ENSHGLG00000009991	RBM4	98	98.571	ENSCCAG00000016501	RBM4B	98	98.571	Cebus_capucinus
ENSHGLG00000009991	RBM4	100	95.804	ENSCCAG00000007508	-	100	95.804	Cebus_capucinus
ENSHGLG00000009991	RBM4	98	98.571	ENSCATG00000035353	RBM4B	98	98.571	Cercocebus_atys
ENSHGLG00000009991	RBM4	97	99.275	ENSCLAG00000015287	RBM4B	100	86.849	Chinchilla_lanigera
ENSHGLG00000009991	RBM4	100	99.301	ENSCLAG00000014756	RBM4	100	99.301	Chinchilla_lanigera
ENSHGLG00000009991	RBM4	97	99.275	ENSCSAG00000008361	RBM4B	100	87.123	Chlorocebus_sabaeus
ENSHGLG00000009991	RBM4	97	99.275	ENSCHOG00000002892	RBM4B	100	87.945	Choloepus_hoffmanni
ENSHGLG00000009991	RBM4	62	96.476	ENSCHOG00000009753	RBM14-RBM4	100	96.476	Choloepus_hoffmanni
ENSHGLG00000009991	RBM4	100	94.406	ENSCPBG00000023800	-	100	73.560	Chrysemys_picta_bellii
ENSHGLG00000009991	RBM4	98	98.571	ENSCANG00000021868	RBM4B	98	98.571	Colobus_angolensis_palliatus
ENSHGLG00000009991	RBM4	100	98.601	ENSCGRG00001016609	-	100	98.601	Cricetulus_griseus_chok1gshd
ENSHGLG00000009991	RBM4	97	99.275	ENSCGRG00001024693	Rbm4b	100	86.301	Cricetulus_griseus_chok1gshd
ENSHGLG00000009991	RBM4	97	99.275	ENSCGRG00000012112	Rbm4b	100	86.301	Cricetulus_griseus_crigri
ENSHGLG00000009991	RBM4	100	98.601	ENSCGRG00000010183	-	100	98.601	Cricetulus_griseus_crigri
ENSHGLG00000009991	RBM4	97	99.275	ENSDNOG00000019500	-	100	87.397	Dasypus_novemcinctus
ENSHGLG00000009991	RBM4	97	97.826	ENSDNOG00000045639	-	100	86.301	Dasypus_novemcinctus
ENSHGLG00000009991	RBM4	100	97.808	ENSDNOG00000032390	RBM4	100	97.808	Dasypus_novemcinctus
ENSHGLG00000009991	RBM4	97	99.275	ENSDORG00000029108	Rbm4b	100	85.205	Dipodomys_ordii
ENSHGLG00000009991	RBM4	100	97.902	ENSDORG00000004538	-	100	97.902	Dipodomys_ordii
ENSHGLG00000009991	RBM4	62	62.555	ENSETEG00000018142	-	100	62.996	Echinops_telfairi
ENSHGLG00000009991	RBM4	100	96.986	ENSEASG00005005064	RBM4	100	96.986	Equus_asinus_asinus
ENSHGLG00000009991	RBM4	97	99.275	ENSEASG00005005068	RBM4B	100	87.123	Equus_asinus_asinus
ENSHGLG00000009991	RBM4	97	99.275	ENSECAG00000022987	RBM4B	100	86.849	Equus_caballus
ENSHGLG00000009991	RBM4	100	96.986	ENSECAG00000022940	RBM4	100	96.986	Equus_caballus
ENSHGLG00000009991	RBM4	97	98.551	ENSEEUG00000000058	RBM4B	100	86.849	Erinaceus_europaeus
ENSHGLG00000009991	RBM4	98	98.571	ENSFCAG00000007394	RBM4B	98	98.571	Felis_catus
ENSHGLG00000009991	RBM4	100	98.601	ENSFCAG00000029651	RBM4	100	98.601	Felis_catus
ENSHGLG00000009991	RBM4	97	97.826	ENSFALG00000002073	-	100	67.655	Ficedula_albicollis
ENSHGLG00000009991	RBM4	99	91.603	ENSFDAG00000013661	-	96	91.603	Fukomys_damarensis
ENSHGLG00000009991	RBM4	97	99.275	ENSFDAG00000015530	RBM4B	100	86.849	Fukomys_damarensis
ENSHGLG00000009991	RBM4	100	99.452	ENSFDAG00000005447	RBM4	100	99.452	Fukomys_damarensis
ENSHGLG00000009991	RBM4	97	97.826	ENSGALG00000037946	-	100	74.468	Gallus_gallus
ENSHGLG00000009991	RBM4	97	97.826	ENSGALG00000040489	-	84	97.826	Gallus_gallus
ENSHGLG00000009991	RBM4	97	97.101	ENSGAGG00000008553	-	100	73.890	Gopherus_agassizii
ENSHGLG00000009991	RBM4	98	98.571	ENSGGOG00000011698	RBM4B	98	98.571	Gorilla_gorilla
ENSHGLG00000009991	RBM4	98	78.571	ENSGGOG00000043023	-	98	78.832	Gorilla_gorilla
ENSHGLG00000009991	RBM4	100	100.000	ENSHGLG00100003854	RBM4	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000009991	RBM4	97	89.130	ENSHGLG00100020033	-	100	74.212	Heterocephalus_glaber_male
ENSHGLG00000009991	RBM4	97	99.275	ENSHGLG00100003978	-	100	86.339	Heterocephalus_glaber_male
ENSHGLG00000009991	RBM4	97	99.275	ENSSTOG00000011226	RBM4B	100	87.397	Ictidomys_tridecemlineatus
ENSHGLG00000009991	RBM4	100	98.630	ENSSTOG00000022811	RBM4	100	98.630	Ictidomys_tridecemlineatus
ENSHGLG00000009991	RBM4	97	95.620	ENSJJAG00000020870	Rbm4b	100	83.836	Jaculus_jaculus
ENSHGLG00000009991	RBM4	93	75.940	ENSJJAG00000003168	-	92	74.627	Jaculus_jaculus
ENSHGLG00000009991	RBM4	97	99.275	ENSLAFG00000002285	RBM4B	100	84.932	Loxodonta_africana
ENSHGLG00000009991	RBM4	97	99.275	ENSLAFG00000028147	-	100	95.616	Loxodonta_africana
ENSHGLG00000009991	RBM4	100	97.902	ENSMFAG00000033927	RBM4B	99	97.902	Macaca_fascicularis
ENSHGLG00000009991	RBM4	98	98.571	ENSMNEG00000043371	RBM4B	98	98.571	Macaca_nemestrina
ENSHGLG00000009991	RBM4	100	97.902	ENSMLEG00000028563	RBM4B	99	97.902	Mandrillus_leucophaeus
ENSHGLG00000009991	RBM4	97	99.275	ENSMAUG00000017027	Rbm4b	100	84.658	Mesocricetus_auratus
ENSHGLG00000009991	RBM4	100	94.406	ENSMICG00000003817	-	100	94.406	Microcebus_murinus
ENSHGLG00000009991	RBM4	98	98.571	ENSMICG00000003820	RBM4B	98	98.571	Microcebus_murinus
ENSHGLG00000009991	RBM4	100	96.503	ENSMICG00000047975	-	99	96.503	Microcebus_murinus
ENSHGLG00000009991	RBM4	97	99.275	ENSMOCG00000001835	Rbm4b	100	85.205	Microtus_ochrogaster
ENSHGLG00000009991	RBM4	97	97.101	ENSMODG00000008056	-	100	92.391	Monodelphis_domestica
ENSHGLG00000009991	RBM4	100	98.601	MGP_CAROLIEiJ_G0022516	-	100	98.601	Mus_caroli
ENSHGLG00000009991	RBM4	97	99.275	MGP_CAROLIEiJ_G0022515	Rbm4b	100	85.479	Mus_caroli
ENSHGLG00000009991	RBM4	99	67.847	MGP_CAROLIEiJ_G0022514	-	100	68.665	Mus_caroli
ENSHGLG00000009991	RBM4	97	99.275	ENSMUSG00000096370	Gm21992	100	95.628	Mus_musculus
ENSHGLG00000009991	RBM4	100	98.601	ENSMUSG00000094936	Rbm4	100	99.419	Mus_musculus
ENSHGLG00000009991	RBM4	100	96.503	ENSMUSG00000033760	Rbm4b	94	96.503	Mus_musculus
ENSHGLG00000009991	RBM4	97	99.275	MGP_PahariEiJ_G0014011	-	100	95.902	Mus_pahari
ENSHGLG00000009991	RBM4	97	99.275	MGP_PahariEiJ_G0014012	Rbm4b	100	85.205	Mus_pahari
ENSHGLG00000009991	RBM4	100	98.601	MGP_PahariEiJ_G0014013	-	100	98.601	Mus_pahari
ENSHGLG00000009991	RBM4	100	73.611	MGP_SPRETEiJ_G0023429	-	100	74.306	Mus_spretus
ENSHGLG00000009991	RBM4	100	75.610	MGP_SPRETEiJ_G0023428	-	94	76.524	Mus_spretus
ENSHGLG00000009991	RBM4	100	75.610	MGP_SPRETEiJ_G0023430	-	100	76.524	Mus_spretus
ENSHGLG00000009991	RBM4	100	98.630	ENSMPUG00000003443	RBM4	100	98.630	Mustela_putorius_furo
ENSHGLG00000009991	RBM4	97	99.275	ENSMPUG00000003450	RBM4B	100	87.671	Mustela_putorius_furo
ENSHGLG00000009991	RBM4	97	98.551	ENSMLUG00000004076	RBM4	95	95.592	Myotis_lucifugus
ENSHGLG00000009991	RBM4	97	99.275	ENSMLUG00000001290	RBM4B	100	85.205	Myotis_lucifugus
ENSHGLG00000009991	RBM4	97	99.275	ENSNGAG00000016292	Rbm4b	100	85.479	Nannospalax_galili
ENSHGLG00000009991	RBM4	98	98.571	ENSNLEG00000006213	RBM4B	98	98.571	Nomascus_leucogenys
ENSHGLG00000009991	RBM4	100	98.601	ENSNLEG00000035021	RBM4	100	98.601	Nomascus_leucogenys
ENSHGLG00000009991	RBM4	62	87.665	ENSMEUG00000005739	-	100	87.665	Notamacropus_eugenii
ENSHGLG00000009991	RBM4	97	98.551	ENSMEUG00000001445	-	100	89.315	Notamacropus_eugenii
ENSHGLG00000009991	RBM4	100	98.082	ENSOPRG00000009149	RBM4	100	98.082	Ochotona_princeps
ENSHGLG00000009991	RBM4	97	99.275	ENSOPRG00000009158	RBM4B	100	87.397	Ochotona_princeps
ENSHGLG00000009991	RBM4	100	76.923	ENSODEG00000006635	-	100	76.923	Octodon_degus
ENSHGLG00000009991	RBM4	97	100.000	ENSODEG00000017696	-	100	87.123	Octodon_degus
ENSHGLG00000009991	RBM4	100	95.804	ENSODEG00000019143	-	100	95.804	Octodon_degus
ENSHGLG00000009991	RBM4	100	97.203	ENSODEG00000020039	-	100	97.203	Octodon_degus
ENSHGLG00000009991	RBM4	96	87.591	ENSODEG00000001866	-	100	79.726	Octodon_degus
ENSHGLG00000009991	RBM4	97	99.275	ENSOANG00000003143	-	84	78.082	Ornithorhynchus_anatinus
ENSHGLG00000009991	RBM4	97	99.275	ENSOANG00000011036	-	100	84.384	Ornithorhynchus_anatinus
ENSHGLG00000009991	RBM4	97	99.275	ENSOCUG00000006695	LARK	100	87.123	Oryctolagus_cuniculus
ENSHGLG00000009991	RBM4	100	98.630	ENSOCUG00000004731	RBM4	100	98.630	Oryctolagus_cuniculus
ENSHGLG00000009991	RBM4	97	99.275	ENSOGAG00000015648	RBM4B	100	87.123	Otolemur_garnettii
ENSHGLG00000009991	RBM4	100	98.082	ENSOGAG00000015647	RBM4	100	98.082	Otolemur_garnettii
ENSHGLG00000009991	RBM4	97	99.275	ENSOARG00000007700	RBM4	100	93.699	Ovis_aries
ENSHGLG00000009991	RBM4	97	99.275	ENSOARG00000007759	RBM4B	100	87.945	Ovis_aries
ENSHGLG00000009991	RBM4	98	98.571	ENSPPAG00000015125	RBM4B	98	98.571	Pan_paniscus
ENSHGLG00000009991	RBM4	100	98.601	ENSPPRG00000003533	RBM4	100	98.601	Panthera_pardus
ENSHGLG00000009991	RBM4	98	98.571	ENSPPRG00000003388	RBM4B	98	98.571	Panthera_pardus
ENSHGLG00000009991	RBM4	100	99.301	ENSPTIG00000016180	RBM4	100	99.301	Panthera_tigris_altaica
ENSHGLG00000009991	RBM4	98	98.571	ENSPTIG00000015426	RBM4B	98	98.571	Panthera_tigris_altaica
ENSHGLG00000009991	RBM4	98	98.571	ENSPTRG00000003935	RBM4B	98	98.571	Pan_troglodytes
ENSHGLG00000009991	RBM4	98	98.571	ENSPANG00000020672	RBM4B	98	98.571	Papio_anubis
ENSHGLG00000009991	RBM4	97	96.377	ENSPSIG00000003477	-	95	77.740	Pelodiscus_sinensis
ENSHGLG00000009991	RBM4	97	96.377	ENSPSIG00000003430	-	100	73.670	Pelodiscus_sinensis
ENSHGLG00000009991	RBM4	97	99.275	ENSPEMG00000009144	Rbm4b	100	86.301	Peromyscus_maniculatus_bairdii
ENSHGLG00000009991	RBM4	100	96.986	ENSPPYG00000003012	RBM4	100	96.986	Pongo_abelii
ENSHGLG00000009991	RBM4	97	99.275	ENSPPYG00000003010	RBM4B	100	87.123	Pongo_abelii
ENSHGLG00000009991	RBM4	100	96.164	ENSPCAG00000003393	-	100	96.164	Procavia_capensis
ENSHGLG00000009991	RBM4	98	98.571	ENSPCOG00000027885	RBM4B	98	98.571	Propithecus_coquereli
ENSHGLG00000009991	RBM4	97	99.275	ENSPVAG00000010487	RBM4B	100	87.397	Pteropus_vampyrus
ENSHGLG00000009991	RBM4	100	98.082	ENSPVAG00000010486	RBM4	100	98.082	Pteropus_vampyrus
ENSHGLG00000009991	RBM4	97	99.275	ENSRNOG00000061795	Rbm4b	100	86.027	Rattus_norvegicus
ENSHGLG00000009991	RBM4	100	98.601	ENSRNOG00000050741	Rbm4	100	98.601	Rattus_norvegicus
ENSHGLG00000009991	RBM4	98	98.571	ENSRBIG00000019394	RBM4B	98	98.571	Rhinopithecus_bieti
ENSHGLG00000009991	RBM4	100	96.503	ENSRROG00000032796	-	90	99.296	Rhinopithecus_roxellana
ENSHGLG00000009991	RBM4	98	98.571	ENSRROG00000032850	RBM4B	98	98.571	Rhinopithecus_roxellana
ENSHGLG00000009991	RBM4	98	97.857	ENSSBOG00000034474	RBM4B	98	97.857	Saimiri_boliviensis_boliviensis
ENSHGLG00000009991	RBM4	97	99.275	ENSSHAG00000008386	-	100	87.671	Sarcophilus_harrisii
ENSHGLG00000009991	RBM4	97	99.275	ENSSARG00000010710	RBM4B	100	87.397	Sorex_araneus
ENSHGLG00000009991	RBM4	100	98.356	ENSSSCG00000032437	RBM4	100	98.356	Sus_scrofa
ENSHGLG00000009991	RBM4	97	97.101	ENSTGUG00000016779	-	94	78.125	Taeniopygia_guttata
ENSHGLG00000009991	RBM4	97	99.275	ENSTBEG00000003748	RBM4B	100	85.479	Tupaia_belangeri
ENSHGLG00000009991	RBM4	96	99.200	ENSTBEG00000003727	-	70	98.636	Tupaia_belangeri
ENSHGLG00000009991	RBM4	100	98.082	ENSTTRG00000011164	RBM4	100	98.082	Tursiops_truncatus
ENSHGLG00000009991	RBM4	97	98.551	ENSTTRG00000011166	RBM4B	100	87.123	Tursiops_truncatus
ENSHGLG00000009991	RBM4	97	99.275	ENSUAMG00000004745	RBM4B	100	87.671	Ursus_americanus
ENSHGLG00000009991	RBM4	100	98.601	ENSUAMG00000014882	RBM4	100	98.601	Ursus_americanus
ENSHGLG00000009991	RBM4	100	97.902	ENSUMAG00000011738	-	100	97.902	Ursus_maritimus
ENSHGLG00000009991	RBM4	97	99.275	ENSVPAG00000001949	RBM4	100	95.890	Vicugna_pacos
ENSHGLG00000009991	RBM4	97	98.551	ENSVPAG00000001950	RBM4B	100	87.123	Vicugna_pacos
ENSHGLG00000009991	RBM4	100	97.808	ENSVVUG00000010622	RBM4	100	97.808	Vulpes_vulpes
ENSHGLG00000009991	RBM4	99	88.652	ENSVVUG00000011717	-	96	88.652	Vulpes_vulpes
ENSHGLG00000009991	RBM4	97	99.275	ENSVVUG00000010619	RBM4B	100	87.123	Vulpes_vulpes