EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHGLG00000011162 (Gene tree)
Gene ID
-
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Heterocephalus_glaber_female
Status
putative
Strand
Minus strand
Length
17942 bases
Position
chrJH602077.1:22069224-22087165
Accession
101712162
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHGLP00000015602PABPPF00658.181.7e-3111
ENSHGLP00000015600PABPPF00658.181.8e-3111
ENSHGLP00000015601PABPPF00658.181.9e-3111
ENSHGLP00000015602RRM_5PF13893.62.8e-0912
ENSHGLP00000015602RRM_5PF13893.62.8e-0922
ENSHGLP00000015600RRM_5PF13893.63.1e-0912
ENSHGLP00000015600RRM_5PF13893.63.1e-0922
ENSHGLP00000015601RRM_5PF13893.63.5e-0912
ENSHGLP00000015601RRM_5PF13893.63.5e-0922
ENSHGLP00000015602RRM_1PF00076.223.2e-9214
ENSHGLP00000015602RRM_1PF00076.223.2e-9224
ENSHGLP00000015602RRM_1PF00076.223.2e-9234
ENSHGLP00000015602RRM_1PF00076.223.2e-9244
ENSHGLP00000015600RRM_1PF00076.223.6e-9214
ENSHGLP00000015600RRM_1PF00076.223.6e-9224
ENSHGLP00000015600RRM_1PF00076.223.6e-9234
ENSHGLP00000015600RRM_1PF00076.223.6e-9244
ENSHGLP00000015601RRM_1PF00076.224.1e-9214
ENSHGLP00000015601RRM_1PF00076.224.1e-9224
ENSHGLP00000015601RRM_1PF00076.224.1e-9234
ENSHGLP00000015601RRM_1PF00076.224.1e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHGLT00000015764-2771XM_013074382ENSHGLP00000015600644 (aa)XP_012929836UPI00034F5E57
ENSHGLT00000015765-2974XM_004851025ENSHGLP00000015601660 (aa)XP_004851082A0A0P6JDH2
ENSHGLT00000015766-2887XM_013074383ENSHGLP00000015602631 (aa)XP_012929837UPI00034F2C55
Gene Model
Click here to download ENSHGLG00000011162's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000011162's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHGLG00000011162PABPC49864.412ENSHGLG00000008434PABPC1L9963.265
ENSHGLG00000011162PABPC49978.471ENSHGLG00000007713-9978.594
ENSHGLG00000011162PABPC45730.370ENSHGLG00000005927TIA17230.263
ENSHGLG00000011162PABPC45930.625ENSHGLG00000000485ELAVL49230.625
ENSHGLG00000011162PABPC45431.646ENSHGLG00000018216HNRNPA05132.450
ENSHGLG00000011162PABPC46171.622ENSHGLG00000020104PABPC4L9971.622
ENSHGLG00000011162PABPC49861.404ENSHGLG00000003042-9660.771
ENSHGLG00000011162PABPC45875.635ENSHGLG00000019762-9975.635
ENSHGLG00000011162PABPC45837.500ENSHGLG00000017139CELF25937.500
ENSHGLG00000011162PABPC45875.635ENSHGLG00000019668-9975.635
ENSHGLG00000011162PABPC45834.940ENSHGLG00000005423ELAVL28934.940
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHGLG00000011162PABPC410099.545ENSG00000090621PABPC4100100.000Homo_sapiens
ENSHGLG00000011162PABPC49983.201ENSAPOG00000001161pabpc410082.609Acanthochromis_polyacanthus
ENSHGLG00000011162PABPC49857.556ENSAMEG00000015083-9957.235Ailuropoda_melanoleuca
ENSHGLG00000011162PABPC410099.091ENSAMEG00000011535-10099.091Ailuropoda_melanoleuca
ENSHGLG00000011162PABPC410083.438ENSACIG00000023343pabpc410082.462Amphilophus_citrinellus
ENSHGLG00000011162PABPC49983.360ENSAOCG00000021529pabpc410082.636Amphiprion_ocellaris
ENSHGLG00000011162PABPC49983.360ENSAPEG00000019196pabpc410082.636Amphiprion_percula
ENSHGLG00000011162PABPC49982.753ENSATEG00000007402pabpc410082.016Anabas_testudineus
ENSHGLG00000011162PABPC49991.270ENSAPLG00000009729-10091.270Anas_platyrhynchos
ENSHGLG00000011162PABPC49990.340ENSACAG00000002544PABPC410090.340Anolis_carolinensis
ENSHGLG00000011162PABPC410099.394ENSANAG00000025079PABPC410099.394Aotus_nancymaae
ENSHGLG00000011162PABPC410082.969ENSACLG00000019558pabpc410082.946Astatotilapia_calliptera
ENSHGLG00000011162PABPC49979.081ENSAMXG00000018779pabpc49979.873Astyanax_mexicanus
ENSHGLG00000011162PABPC45786.826ENSBTAG00000048536-9886.826Bos_taurus
ENSHGLG00000011162PABPC410099.070ENSBTAG00000017125PABPC410099.070Bos_taurus
ENSHGLG00000011162PABPC410099.242ENSCJAG00000002512-10099.242Callithrix_jacchus
ENSHGLG00000011162PABPC47789.344ENSCJAG00000045953-9289.300Callithrix_jacchus
ENSHGLG00000011162PABPC410099.366ENSCAFG00000003081PABPC410099.366Canis_familiaris
ENSHGLG00000011162PABPC410099.242ENSCAFG00020004161PABPC410099.242Canis_lupus_dingo
ENSHGLG00000011162PABPC410099.091ENSCHIG00000019398-10099.091Capra_hircus
ENSHGLG00000011162PABPC410078.571ENSCHIG00000023385-10078.571Capra_hircus
ENSHGLG00000011162PABPC410099.545ENSTSYG00000006532PABPC410099.545Carlito_syrichta
ENSHGLG00000011162PABPC49999.544ENSCAPG00000015984PABPC410099.544Cavia_aperea
ENSHGLG00000011162PABPC410099.545ENSCPOG00000009552PABPC410099.545Cavia_porcellus
ENSHGLG00000011162PABPC410099.394ENSCCAG00000037306PABPC410099.394Cebus_capucinus
ENSHGLG00000011162PABPC410099.697ENSCATG00000042164PABPC410099.697Cercocebus_atys
ENSHGLG00000011162PABPC410099.545ENSCLAG00000011899PABPC410099.545Chinchilla_lanigera
ENSHGLG00000011162PABPC410099.697ENSCSAG00000001135PABPC410099.697Chlorocebus_sabaeus
ENSHGLG00000011162PABPC48697.889ENSCHOG00000005327PABPC48197.889Choloepus_hoffmanni
ENSHGLG00000011162PABPC49991.587ENSCPBG00000001038PABPC410091.587Chrysemys_picta_bellii
ENSHGLG00000011162PABPC49999.539ENSCANG00000034177PABPC410099.539Colobus_angolensis_palliatus
ENSHGLG00000011162PABPC410097.590ENSCGRG00001018166Pabpc410097.590Cricetulus_griseus_chok1gshd
ENSHGLG00000011162PABPC49997.496ENSCGRG00000009777Pabpc410097.496Cricetulus_griseus_crigri
ENSHGLG00000011162PABPC410082.344ENSCSEG00000000130pabpc410082.016Cynoglossus_semilaevis
ENSHGLG00000011162PABPC49983.466ENSCVAG00000019246pabpc410083.596Cyprinodon_variegatus
ENSHGLG00000011162PABPC49985.079ENSDARG00000059259pabpc410085.855Danio_rerio
ENSHGLG00000011162PABPC49999.643ENSDNOG00000018444-10099.643Dasypus_novemcinctus
ENSHGLG00000011162PABPC410099.689ENSDORG00000011581Pabpc410099.689Dipodomys_ordii
ENSHGLG00000011162PABPC4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSHGLG00000011162PABPC48665.370ENSETEG00000009172-9965.385Echinops_telfairi
ENSHGLG00000011162PABPC49776.737ENSEBUG00000013782pabpc49975.791Eptatretus_burgeri
ENSHGLG00000011162PABPC49976.424ENSEBUG00000000992pabpc49980.346Eptatretus_burgeri
ENSHGLG00000011162PABPC410099.697ENSEASG00005014119PABPC410099.697Equus_asinus_asinus
ENSHGLG00000011162PABPC410099.697ENSECAG00000009396PABPC410099.697Equus_caballus
ENSHGLG00000011162PABPC410096.364ENSEEUG00000002962PABPC410096.364Erinaceus_europaeus
ENSHGLG00000011162PABPC49983.439ENSELUG00000003195pabpc49884.019Esox_lucius
ENSHGLG00000011162PABPC410099.394ENSFCAG00000015254-10099.394Felis_catus
ENSHGLG00000011162PABPC49990.794ENSFALG00000000543PABPC410090.794Ficedula_albicollis
ENSHGLG00000011162PABPC410099.848ENSFDAG00000020016-10099.848Fukomys_damarensis
ENSHGLG00000011162PABPC49067.901ENSFDAG00000010581-10063.697Fukomys_damarensis
ENSHGLG00000011162PABPC410083.255ENSFHEG00000007548pabpc49688.578Fundulus_heteroclitus
ENSHGLG00000011162PABPC49982.965ENSGMOG00000019025pabpc49983.123Gadus_morhua
ENSHGLG00000011162PABPC49991.587ENSGALG00000003800PABPC410091.587Gallus_gallus
ENSHGLG00000011162PABPC49990.566ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSHGLG00000011162PABPC410081.562ENSGACG00000007179pabpc410082.087Gasterosteus_aculeatus
ENSHGLG00000011162PABPC49991.429ENSGAGG00000001888PABPC410091.429Gopherus_agassizii
ENSHGLG00000011162PABPC410099.545ENSGGOG00000004002PABPC410099.545Gorilla_gorilla
ENSHGLG00000011162PABPC410083.125ENSHBUG00000020206pabpc410083.101Haplochromis_burtoni
ENSHGLG00000011162PABPC4100100.000ENSHGLG00100001580PABPC4100100.000Heterocephalus_glaber_male
ENSHGLG00000011162PABPC410082.160ENSHCOG00000012694pabpc410081.988Hippocampus_comes
ENSHGLG00000011162PABPC49883.013ENSIPUG00000016620pabpc49980.952Ictalurus_punctatus
ENSHGLG00000011162PABPC410099.845ENSSTOG00000010416PABPC410099.845Ictidomys_tridecemlineatus
ENSHGLG00000011162PABPC410097.205ENSJJAG00000007781Pabpc410097.205Jaculus_jaculus
ENSHGLG00000011162PABPC49991.076ENSKMAG00000013597pabpc49982.344Kryptolebias_marmoratus
ENSHGLG00000011162PABPC410082.426ENSLBEG00000013654pabpc410081.776Labrus_bergylta
ENSHGLG00000011162PABPC49988.013ENSLACG00000011907PABPC410088.013Latimeria_chalumnae
ENSHGLG00000011162PABPC49985.354ENSLOCG00000001877pabpc49986.142Lepisosteus_oculatus
ENSHGLG00000011162PABPC410099.242ENSLAFG00000000151PABPC410099.242Loxodonta_africana
ENSHGLG00000011162PABPC410099.697ENSMFAG00000041481PABPC410099.697Macaca_fascicularis
ENSHGLG00000011162PABPC410099.697ENSMMUG00000007497PABPC410099.697Macaca_mulatta
ENSHGLG00000011162PABPC410099.545ENSMNEG00000043054PABPC410099.545Macaca_nemestrina
ENSHGLG00000011162PABPC410099.697ENSMLEG00000040716PABPC410099.697Mandrillus_leucophaeus
ENSHGLG00000011162PABPC49983.043ENSMAMG00000010025pabpc49982.215Mastacembelus_armatus
ENSHGLG00000011162PABPC410082.812ENSMZEG00005006141pabpc410082.791Maylandia_zebra
ENSHGLG00000011162PABPC49987.734ENSMGAG00000005408PABPC410087.734Meleagris_gallopavo
ENSHGLG00000011162PABPC45783.234ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSHGLG00000011162PABPC47289.423ENSMAUG00000001295-9789.423Mesocricetus_auratus
ENSHGLG00000011162PABPC47795.413ENSMAUG00000019763-8495.413Mesocricetus_auratus
ENSHGLG00000011162PABPC49981.350ENSMICG00000036729-10085.613Microcebus_murinus
ENSHGLG00000011162PABPC48998.087ENSMICG00000016633-10098.087Microcebus_murinus
ENSHGLG00000011162PABPC410098.042ENSMOCG00000006763Pabpc410098.042Microtus_ochrogaster
ENSHGLG00000011162PABPC410080.660ENSMMOG00000002363pabpc49981.476Mola_mola
ENSHGLG00000011162PABPC49889.198ENSMODG00000017657-10088.788Monodelphis_domestica
ENSHGLG00000011162PABPC45974.011ENSMODG00000018051-9174.011Monodelphis_domestica
ENSHGLG00000011162PABPC49982.622ENSMALG00000011017pabpc410082.071Monopterus_albus
ENSHGLG00000011162PABPC410097.727MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSHGLG00000011162PABPC49984.629MGP_CAROLIEiJ_G0024864-10085.043Mus_caroli
ENSHGLG00000011162PABPC410098.292ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSHGLG00000011162PABPC49997.849MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSHGLG00000011162PABPC49978.900MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSHGLG00000011162PABPC49553.642ENSMPUG00000006836-10053.477Mustela_putorius_furo
ENSHGLG00000011162PABPC410099.394ENSMPUG00000014414-10099.394Mustela_putorius_furo
ENSHGLG00000011162PABPC410096.672ENSMLUG00000012068PABPC410096.672Myotis_lucifugus
ENSHGLG00000011162PABPC410099.068ENSNGAG00000018292Pabpc410099.068Nannospalax_galili
ENSHGLG00000011162PABPC45992.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSHGLG00000011162PABPC46786.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSHGLG00000011162PABPC410099.689ENSNLEG00000011928PABPC410099.689Nomascus_leucogenys
ENSHGLG00000011162PABPC48598.947ENSOPRG00000011984PABPC48798.947Ochotona_princeps
ENSHGLG00000011162PABPC49989.733ENSODEG00000017434-10089.613Octodon_degus
ENSHGLG00000011162PABPC45385.714ENSODEG00000013457-10085.714Octodon_degus
ENSHGLG00000011162PABPC410098.939ENSODEG00000006592-10098.939Octodon_degus
ENSHGLG00000011162PABPC410083.125ENSONIG00000008176pabpc410082.636Oreochromis_niloticus
ENSHGLG00000011162PABPC49991.270ENSOANG00000010001PABPC410091.270Ornithorhynchus_anatinus
ENSHGLG00000011162PABPC49699.367ENSOCUG00000000562PABPC48899.367Oryctolagus_cuniculus
ENSHGLG00000011162PABPC49991.049ENSORLG00000017479pabpc49991.049Oryzias_latipes
ENSHGLG00000011162PABPC49991.049ENSORLG00020018644pabpc49991.049Oryzias_latipes_hni
ENSHGLG00000011162PABPC49991.049ENSORLG00015015042pabpc49991.049Oryzias_latipes_hsok
ENSHGLG00000011162PABPC49983.043ENSOMEG00000014410pabpc49983.468Oryzias_melastigma
ENSHGLG00000011162PABPC410099.382ENSOGAG00000004067PABPC410099.382Otolemur_garnettii
ENSHGLG00000011162PABPC410099.091ENSOARG00000020060PABPC410099.091Ovis_aries
ENSHGLG00000011162PABPC410099.545ENSPPAG00000043625PABPC410099.545Pan_paniscus
ENSHGLG00000011162PABPC410099.394ENSPPRG00000024727PABPC410099.394Panthera_pardus
ENSHGLG00000011162PABPC410099.394ENSPTIG00000005829PABPC410099.394Panthera_tigris_altaica
ENSHGLG00000011162PABPC410099.545ENSPTRG00000000573PABPC410099.545Pan_troglodytes
ENSHGLG00000011162PABPC410099.545ENSPANG00000009484PABPC410099.545Papio_anubis
ENSHGLG00000011162PABPC49984.810ENSPKIG00000025356pabpc49982.844Paramormyrops_kingsleyae
ENSHGLG00000011162PABPC49991.587ENSPSIG00000016892PABPC410091.587Pelodiscus_sinensis
ENSHGLG00000011162PABPC410081.732ENSPMGG00000009073pabpc49981.633Periophthalmus_magnuspinnatus
ENSHGLG00000011162PABPC410093.634ENSPEMG00000024193-9993.634Peromyscus_maniculatus_bairdii
ENSHGLG00000011162PABPC410097.576ENSPEMG00000023569-9997.576Peromyscus_maniculatus_bairdii
ENSHGLG00000011162PABPC49771.107ENSPMAG00000007885pabpc410070.020Petromyzon_marinus
ENSHGLG00000011162PABPC48973.310ENSPMAG00000002836pabpc410073.368Petromyzon_marinus
ENSHGLG00000011162PABPC49894.033ENSPCIG00000020674PABPC410093.810Phascolarctos_cinereus
ENSHGLG00000011162PABPC410082.629ENSPFOG00000002682pabpc410083.075Poecilia_formosa
ENSHGLG00000011162PABPC410082.473ENSPLAG00000010112pabpc410083.075Poecilia_latipinna
ENSHGLG00000011162PABPC49983.148ENSPMEG00000019739pabpc410083.230Poecilia_mexicana
ENSHGLG00000011162PABPC410083.447ENSPREG00000001589pabpc410083.447Poecilia_reticulata
ENSHGLG00000011162PABPC410099.545ENSPPYG00000001506PABPC410099.545Pongo_abelii
ENSHGLG00000011162PABPC410094.394ENSPCAG00000003341PABPC410094.394Procavia_capensis
ENSHGLG00000011162PABPC410099.697ENSPCOG00000023725-10099.697Propithecus_coquereli
ENSHGLG00000011162PABPC49982.173ENSPCOG00000025882-9594.059Propithecus_coquereli
ENSHGLG00000011162PABPC49998.824ENSPVAG00000002187PABPC410098.824Pteropus_vampyrus
ENSHGLG00000011162PABPC410082.969ENSPNYG00000006134pabpc410082.946Pundamilia_nyererei
ENSHGLG00000011162PABPC410083.412ENSPNAG00000024355pabpc410082.435Pygocentrus_nattereri
ENSHGLG00000011162PABPC410096.118ENSRNOG00000028592AABR07035074.110096.118Rattus_norvegicus
ENSHGLG00000011162PABPC410098.292ENSRNOG00000015642Pabpc410098.292Rattus_norvegicus
ENSHGLG00000011162PABPC410099.697ENSRBIG00000039761PABPC410099.697Rhinopithecus_bieti
ENSHGLG00000011162PABPC410099.697ENSRROG00000033355PABPC410099.697Rhinopithecus_roxellana
ENSHGLG00000011162PABPC410099.242ENSSBOG00000026193PABPC410099.242Saimiri_boliviensis_boliviensis
ENSHGLG00000011162PABPC49892.557ENSSHAG00000018139PABPC410092.063Sarcophilus_harrisii
ENSHGLG00000011162PABPC49985.550ENSSFOG00015023514pabpc49984.304Scleropages_formosus
ENSHGLG00000011162PABPC49982.595ENSSMAG00000009007pabpc49982.261Scophthalmus_maximus
ENSHGLG00000011162PABPC49988.046ENSSDUG00000012683pabpc49588.046Seriola_dumerili
ENSHGLG00000011162PABPC49982.567ENSSLDG00000013025pabpc49785.588Seriola_lalandi_dorsalis
ENSHGLG00000011162PABPC410091.970ENSSARG00000000310PABPC410091.970Sorex_araneus
ENSHGLG00000011162PABPC49989.841ENSSPUG00000003204PABPC410089.841Sphenodon_punctatus
ENSHGLG00000011162PABPC49990.562ENSSPAG00000009252pabpc49790.359Stegastes_partitus
ENSHGLG00000011162PABPC410099.242ENSSSCG00000003660-10099.242Sus_scrofa
ENSHGLG00000011162PABPC48951.730ENSSSCG00000036170-9651.730Sus_scrofa
ENSHGLG00000011162PABPC49987.443ENSTGUG00000001266PABPC410087.443Taeniopygia_guttata
ENSHGLG00000011162PABPC410082.075ENSTRUG00000005907pabpc49982.160Takifugu_rubripes
ENSHGLG00000011162PABPC410078.056ENSTNIG00000016902pabpc49978.056Tetraodon_nigroviridis
ENSHGLG00000011162PABPC49988.571ENSTBEG00000009035PABPC410088.571Tupaia_belangeri
ENSHGLG00000011162PABPC49983.333ENSTTRG00000014340PABPC410087.059Tursiops_truncatus
ENSHGLG00000011162PABPC410099.208ENSUAMG00000000303PABPC410099.208Ursus_americanus
ENSHGLG00000011162PABPC410099.091ENSUMAG00000019585PABPC410099.107Ursus_maritimus
ENSHGLG00000011162PABPC48497.163ENSVPAG00000010041PABPC47797.163Vicugna_pacos
ENSHGLG00000011162PABPC410099.366ENSVVUG00000005215PABPC410099.366Vulpes_vulpes
ENSHGLG00000011162PABPC49983.175ENSXETG00000010946pabpc410083.175Xenopus_tropicalis
ENSHGLG00000011162PABPC46197.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSHGLG00000011162PABPC49989.351ENSXCOG00000013190pabpc49690.094Xiphophorus_couchianus
ENSHGLG00000011162PABPC410082.786ENSXMAG00000019007pabpc410082.919Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us