EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000011178 (Gene tree)
Gene ID: -
Gene Symbol: FAM172A
Alias: C5orf21|DKFZP564D172|Toupee
Full Name: family with sequence similarity 172 member A
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 422663 bases
Position: chrJH602056.1:12513331-12935993
Accession: 101725354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000015629	Arb2	PF09757.9	4.6e-09	1	1
ENSHGLP00000015630	Arb2	PF09757.9	4.6e-09	1	1
ENSHGLP00000015631	Arb2	PF09757.9	3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000015795	-	921	XM_004841686	ENSHGLP00000015631	306 (aa)	XP_004841743	-
ENSHGLT00000015794	-	2199	XM_004841685	ENSHGLP00000015630	416 (aa)	XP_004841742	A0A0P6JDL4
ENSHGLT00000015793	-	2245	-	ENSHGLP00000015629	416 (aa)	XP_021111428	A0A0P6JDL4

Gene Model

Click here to download ENSHGLG00000011178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000011178's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000011178	FAM172A	100	96.203	ENSG00000113391	FAM172A	100	96.203	Homo_sapiens
ENSHGLG00000011178	FAM172A	73	38.428	ENSAPLG00000011555	-	97	38.961	Anas_platyrhynchos
ENSHGLG00000011178	FAM172A	100	91.139	ENSAPLG00000004055	FAM172A	97	87.129	Anas_platyrhynchos
ENSHGLG00000011178	FAM172A	88	89.873	ENSACAG00000013305	FAM172A	95	87.705	Anolis_carolinensis
ENSHGLG00000011178	FAM172A	89	88.140	ENSANAG00000035869	FAM172A	92	88.140	Aotus_nancymaae
ENSHGLG00000011178	FAM172A	100	97.468	ENSBTAG00000050195	FAM172A	97	94.815	Bos_taurus
ENSHGLG00000011178	FAM172A	100	97.468	ENSCJAG00000010444	FAM172A	97	95.062	Callithrix_jacchus
ENSHGLG00000011178	FAM172A	89	97.297	ENSCAFG00000008064	FAM172A	99	97.297	Canis_familiaris
ENSHGLG00000011178	FAM172A	100	97.468	ENSCAFG00020006210	FAM172A	97	95.309	Canis_lupus_dingo
ENSHGLG00000011178	FAM172A	100	97.468	ENSCHIG00000008440	FAM172A	97	94.815	Capra_hircus
ENSHGLG00000011178	FAM172A	66	95.135	ENSTSYG00000006286	FAM172A	85	96.241	Carlito_syrichta
ENSHGLG00000011178	FAM172A	63	98.750	ENSCAPG00000014103	-	100	98.750	Cavia_aperea
ENSHGLG00000011178	FAM172A	100	97.468	ENSCCAG00000023116	FAM172A	100	94.324	Cebus_capucinus
ENSHGLG00000011178	FAM172A	100	98.734	ENSCLAG00000005472	FAM172A	100	98.734	Chinchilla_lanigera
ENSHGLG00000011178	FAM172A	95	49.383	ENSCPBG00000004402	-	96	42.973	Chrysemys_picta_bellii
ENSHGLG00000011178	FAM172A	67	94.086	ENSCANG00000040412	FAM172A	92	95.556	Colobus_angolensis_palliatus
ENSHGLG00000011178	FAM172A	100	96.203	ENSDNOG00000004689	FAM172A	97	94.321	Dasypus_novemcinctus
ENSHGLG00000011178	FAM172A	68	95.604	ENSDORG00000013558	Fam172a	88	95.185	Dipodomys_ordii
ENSHGLG00000011178	FAM172A	87	39.706	ENSEBUG00000016097	-	62	40.303	Eptatretus_burgeri
ENSHGLG00000011178	FAM172A	100	96.203	ENSECAG00000018274	FAM172A	95	95.531	Equus_caballus
ENSHGLG00000011178	FAM172A	96	81.750	ENSEEUG00000002887	FAM172A	97	81.481	Erinaceus_europaeus
ENSHGLG00000011178	FAM172A	99	79.747	ENSELUG00000017647	fam172a	95	68.317	Esox_lucius
ENSHGLG00000011178	FAM172A	100	97.468	ENSFCAG00000025443	FAM172A	97	95.062	Felis_catus
ENSHGLG00000011178	FAM172A	93	55.385	ENSFALG00000006501	-	98	43.750	Ficedula_albicollis
ENSHGLG00000011178	FAM172A	85	89.873	ENSFALG00000009072	FAM172A	95	89.014	Ficedula_albicollis
ENSHGLG00000011178	FAM172A	100	89.873	ENSGALG00000014661	FAM172A	97	87.376	Gallus_gallus
ENSHGLG00000011178	FAM172A	100	94.937	ENSGAGG00000003839	FAM172A	97	90.099	Gopherus_agassizii
ENSHGLG00000011178	FAM172A	92	53.846	ENSGAGG00000022828	-	93	44.068	Gopherus_agassizii
ENSHGLG00000011178	FAM172A	100	97.468	ENSGGOG00000010296	FAM172A	97	94.568	Gorilla_gorilla
ENSHGLG00000011178	FAM172A	89	100.000	ENSHGLG00100013340	FAM172A	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000011178	FAM172A	100	97.468	ENSSTOG00000009918	FAM172A	97	94.568	Ictidomys_tridecemlineatus
ENSHGLG00000011178	FAM172A	88	47.554	ENSLACG00000001532	si:ch73-41e3.7	97	47.554	Latimeria_chalumnae
ENSHGLG00000011178	FAM172A	100	73.508	ENSLOCG00000001629	fam172a	97	75.309	Lepisosteus_oculatus
ENSHGLG00000011178	FAM172A	67	94.086	ENSMFAG00000001171	FAM172A	92	95.556	Macaca_fascicularis
ENSHGLG00000011178	FAM172A	100	97.468	ENSMNEG00000039938	FAM172A	92	95.556	Macaca_nemestrina
ENSHGLG00000011178	FAM172A	100	97.468	ENSMICG00000030403	FAM172A	97	95.556	Microcebus_murinus
ENSHGLG00000011178	FAM172A	100	94.937	ENSMOCG00000003613	Fam172a	100	92.432	Microtus_ochrogaster
ENSHGLG00000011178	FAM172A	100	87.019	ENSMODG00000020131	FAM172A	97	87.624	Monodelphis_domestica
ENSHGLG00000011178	FAM172A	100	91.176	MGP_PahariEiJ_G0015818	Fam172a	100	93.671	Mus_pahari
ENSHGLG00000011178	FAM172A	100	96.203	ENSNGAG00000019570	Fam172a	100	94.595	Nannospalax_galili
ENSHGLG00000011178	FAM172A	68	93.583	ENSNLEG00000013903	FAM172A	89	95.556	Nomascus_leucogenys
ENSHGLG00000011178	FAM172A	89	88.649	ENSOANG00000011068	FAM172A	95	91.011	Ornithorhynchus_anatinus
ENSHGLG00000011178	FAM172A	96	97.468	ENSOCUG00000007299	FAM172A	94	94.924	Oryctolagus_cuniculus
ENSHGLG00000011178	FAM172A	97	93.333	ENSOGAG00000015189	FAM172A	97	93.333	Otolemur_garnettii
ENSHGLG00000011178	FAM172A	89	97.468	ENSOARG00000016711	FAM172A	85	93.817	Ovis_aries
ENSHGLG00000011178	FAM172A	67	94.624	ENSPPAG00000030542	FAM172A	92	95.926	Pan_paniscus
ENSHGLG00000011178	FAM172A	100	97.468	ENSPPRG00000006653	FAM172A	97	95.062	Panthera_pardus
ENSHGLG00000011178	FAM172A	100	97.468	ENSPTIG00000012681	FAM172A	97	95.062	Panthera_tigris_altaica
ENSHGLG00000011178	FAM172A	67	94.624	ENSPTRG00000017074	FAM172A	92	95.926	Pan_troglodytes
ENSHGLG00000011178	FAM172A	67	94.086	ENSPANG00000011687	FAM172A	92	95.556	Papio_anubis
ENSHGLG00000011178	FAM172A	85	84.810	ENSPKIG00000012314	fam172a	96	83.516	Paramormyrops_kingsleyae
ENSHGLG00000011178	FAM172A	52	90.000	ENSPSIG00000010144	-	100	90.000	Pelodiscus_sinensis
ENSHGLG00000011178	FAM172A	100	96.203	ENSPEMG00000009604	-	100	96.203	Peromyscus_maniculatus_bairdii
ENSHGLG00000011178	FAM172A	100	94.937	ENSPCIG00000028612	FAM172A	97	87.624	Phascolarctos_cinereus
ENSHGLG00000011178	FAM172A	78	90.336	ENSPCOG00000024072	FAM172A	96	90.336	Propithecus_coquereli
ENSHGLG00000011178	FAM172A	65	92.565	ENSRNOG00000013844	Fam172a	99	92.565	Rattus_norvegicus
ENSHGLG00000011178	FAM172A	58	90.341	ENSRBIG00000028680	-	78	90.341	Rhinopithecus_bieti
ENSHGLG00000011178	FAM172A	67	94.086	ENSRROG00000023807	FAM172A	92	95.556	Rhinopithecus_roxellana
ENSHGLG00000011178	FAM172A	100	97.468	ENSSBOG00000019860	FAM172A	97	94.815	Saimiri_boliviensis_boliviensis
ENSHGLG00000011178	FAM172A	100	86.538	ENSSHAG00000013743	FAM172A	97	87.129	Sarcophilus_harrisii
ENSHGLG00000011178	FAM172A	100	91.139	ENSSPUG00000008161	FAM172A	97	87.624	Sphenodon_punctatus
ENSHGLG00000011178	FAM172A	100	97.468	ENSSSCG00000027608	FAM172A	100	94.595	Sus_scrofa
ENSHGLG00000011178	FAM172A	100	89.873	ENSTGUG00000000715	FAM172A	100	85.526	Taeniopygia_guttata
ENSHGLG00000011178	FAM172A	88	59.016	ENSTGUG00000013623	-	100	45.833	Taeniopygia_guttata
ENSHGLG00000011178	FAM172A	77	81.013	ENSTNIG00000009902	fam172a	99	59.036	Tetraodon_nigroviridis
ENSHGLG00000011178	FAM172A	100	91.827	ENSTTRG00000001521	FAM172A	97	91.852	Tursiops_truncatus
ENSHGLG00000011178	FAM172A	100	97.468	ENSUMAG00000005442	FAM172A	99	96.765	Ursus_maritimus
ENSHGLG00000011178	FAM172A	100	97.468	ENSVVUG00000022112	FAM172A	98	97.043	Vulpes_vulpes
ENSHGLG00000011178	FAM172A	90	42.408	ENSXETG00000033027	-	99	42.408	Xenopus_tropicalis
ENSHGLG00000011178	FAM172A	98	80.000	ENSXETG00000011592	fam172a	96	80.049	Xenopus_tropicalis