EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000011592 (Gene tree)
Gene ID: -
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 64722 bases
Position: chrJH602088.1:15874551-15939272
Accession: 101701527
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000016194	SpoU_methylase	PF00588.19	4.7e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000016363	TARBP1-201	5027	XM_004854632	ENSHGLP00000016194	1592 (aa)	XP_004854689	UPI00034FC59B

Gene Model

Click here to download ENSHGLG00000011592's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000011592's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000011592	TARBP1	99	78.691	ENSG00000059588	TARBP1	99	78.629	Homo_sapiens
ENSHGLG00000011592	TARBP1	92	43.857	ENSAPOG00000016419	si:dkey-85a20.4	85	45.218	Acanthochromis_polyacanthus
ENSHGLG00000011592	TARBP1	86	79.956	ENSAMEG00000003359	TARBP1	99	79.737	Ailuropoda_melanoleuca
ENSHGLG00000011592	TARBP1	85	45.605	ENSATEG00000020266	si:dkey-85a20.4	85	45.364	Anabas_testudineus
ENSHGLG00000011592	TARBP1	85	64.719	ENSAPLG00000007666	TARBP1	99	65.344	Anas_platyrhynchos
ENSHGLG00000011592	TARBP1	98	56.694	ENSACAG00000001142	TARBP1	98	56.238	Anolis_carolinensis
ENSHGLG00000011592	TARBP1	88	76.031	ENSANAG00000022031	TARBP1	99	71.801	Aotus_nancymaae
ENSHGLG00000011592	TARBP1	99	76.733	ENSBTAG00000004517	TARBP1	99	76.918	Bos_taurus
ENSHGLG00000011592	TARBP1	99	77.332	ENSCJAG00000018155	TARBP1	99	77.393	Callithrix_jacchus
ENSHGLG00000011592	TARBP1	89	78.297	ENSCAFG00000011533	TARBP1	99	78.784	Canis_familiaris
ENSHGLG00000011592	TARBP1	99	77.127	ENSCAFG00020027141	TARBP1	99	77.600	Canis_lupus_dingo
ENSHGLG00000011592	TARBP1	99	75.819	ENSCHIG00000011437	TARBP1	99	76.314	Capra_hircus
ENSHGLG00000011592	TARBP1	82	79.189	ENSTSYG00000010382	TARBP1	97	79.112	Carlito_syrichta
ENSHGLG00000011592	TARBP1	80	79.654	ENSCAPG00000010831	TARBP1	100	79.654	Cavia_aperea
ENSHGLG00000011592	TARBP1	100	90.327	ENSCPOG00000013995	TARBP1	100	90.327	Cavia_porcellus
ENSHGLG00000011592	TARBP1	99	77.579	ENSCCAG00000037278	TARBP1	99	77.517	Cebus_capucinus
ENSHGLG00000011592	TARBP1	99	77.826	ENSCATG00000011754	TARBP1	99	78.135	Cercocebus_atys
ENSHGLG00000011592	TARBP1	85	91.501	ENSCLAG00000003655	TARBP1	99	91.501	Chinchilla_lanigera
ENSHGLG00000011592	TARBP1	80	79.423	ENSCSAG00000010100	TARBP1	99	79.345	Chlorocebus_sabaeus
ENSHGLG00000011592	TARBP1	94	62.071	ENSCPBG00000005587	TARBP1	98	61.989	Chrysemys_picta_bellii
ENSHGLG00000011592	TARBP1	85	79.971	ENSCANG00000034343	TARBP1	99	79.897	Colobus_angolensis_palliatus
ENSHGLG00000011592	TARBP1	99	76.618	ENSCGRG00001016690	Tarbp1	99	75.990	Cricetulus_griseus_chok1gshd
ENSHGLG00000011592	TARBP1	90	77.724	ENSCGRG00000016893	Tarbp1	96	78.365	Cricetulus_griseus_crigri
ENSHGLG00000011592	TARBP1	99	38.920	ENSCSEG00000005255	si:dkey-85a20.4	81	48.991	Cynoglossus_semilaevis
ENSHGLG00000011592	TARBP1	87	44.922	ENSDARG00000079055	si:dkey-85a20.4	99	54.844	Danio_rerio
ENSHGLG00000011592	TARBP1	99	74.274	ENSDNOG00000008637	TARBP1	99	74.592	Dasypus_novemcinctus
ENSHGLG00000011592	TARBP1	81	74.634	ENSDORG00000007984	Tarbp1	100	74.769	Dipodomys_ordii
ENSHGLG00000011592	TARBP1	99	78.536	ENSEASG00005000252	TARBP1	99	78.395	Equus_asinus_asinus
ENSHGLG00000011592	TARBP1	99	78.704	ENSECAG00000023673	TARBP1	99	78.642	Equus_caballus
ENSHGLG00000011592	TARBP1	99	41.133	ENSELUG00000012193	si:dkey-85a20.4	86	44.350	Esox_lucius
ENSHGLG00000011592	TARBP1	99	75.262	ENSFCAG00000014183	TARBP1	99	75.571	Felis_catus
ENSHGLG00000011592	TARBP1	81	65.876	ENSFALG00000013565	TARBP1	99	65.677	Ficedula_albicollis
ENSHGLG00000011592	TARBP1	80	89.748	ENSFDAG00000001308	TARBP1	100	89.748	Fukomys_damarensis
ENSHGLG00000011592	TARBP1	99	35.693	ENSFHEG00000007565	si:dkey-85a20.4	77	53.933	Fundulus_heteroclitus
ENSHGLG00000011592	TARBP1	85	43.456	ENSGMOG00000004549	si:dkey-85a20.4	98	43.529	Gadus_morhua
ENSHGLG00000011592	TARBP1	96	61.833	ENSGALG00000011000	TARBP1	99	61.833	Gallus_gallus
ENSHGLG00000011592	TARBP1	85	43.669	ENSGAFG00000007387	si:dkey-85a20.4	85	43.128	Gambusia_affinis
ENSHGLG00000011592	TARBP1	85	45.291	ENSGACG00000005865	si:dkey-85a20.4	99	45.056	Gasterosteus_aculeatus
ENSHGLG00000011592	TARBP1	99	63.993	ENSGAGG00000012102	TARBP1	99	63.868	Gopherus_agassizii
ENSHGLG00000011592	TARBP1	86	78.134	ENSGGOG00000022879	TARBP1	99	78.207	Gorilla_gorilla
ENSHGLG00000011592	TARBP1	87	45.429	ENSHBUG00000008877	si:dkey-85a20.4	86	45.581	Haplochromis_burtoni
ENSHGLG00000011592	TARBP1	96	98.000	ENSHGLG00100015169	TARBP1	100	98.000	Heterocephalus_glaber_male
ENSHGLG00000011592	TARBP1	84	43.590	ENSIPUG00000005249	si:dkey-85a20.4	81	44.111	Ictalurus_punctatus
ENSHGLG00000011592	TARBP1	89	75.407	ENSSTOG00000032291	TARBP1	99	75.407	Ictidomys_tridecemlineatus
ENSHGLG00000011592	TARBP1	96	74.003	ENSJJAG00000017840	Tarbp1	99	74.003	Jaculus_jaculus
ENSHGLG00000011592	TARBP1	80	46.245	ENSKMAG00000017546	si:dkey-85a20.4	76	47.122	Kryptolebias_marmoratus
ENSHGLG00000011592	TARBP1	67	50.794	ENSLBEG00000012132	si:dkey-85a20.4	79	50.794	Labrus_bergylta
ENSHGLG00000011592	TARBP1	99	49.848	ENSLACG00000004337	TARBP1	99	49.757	Latimeria_chalumnae
ENSHGLG00000011592	TARBP1	99	44.859	ENSLOCG00000016214	si:dkey-85a20.4	85	49.360	Lepisosteus_oculatus
ENSHGLG00000011592	TARBP1	96	74.953	ENSLAFG00000011394	TARBP1	100	75.269	Loxodonta_africana
ENSHGLG00000011592	TARBP1	99	75.699	ENSMFAG00000041068	TARBP1	99	75.589	Macaca_fascicularis
ENSHGLG00000011592	TARBP1	99	75.941	ENSMMUG00000021703	TARBP1	99	75.879	Macaca_mulatta
ENSHGLG00000011592	TARBP1	99	78.382	ENSMNEG00000045002	TARBP1	99	78.320	Macaca_nemestrina
ENSHGLG00000011592	TARBP1	85	79.749	ENSMLEG00000044182	TARBP1	99	79.675	Mandrillus_leucophaeus
ENSHGLG00000011592	TARBP1	85	45.501	ENSMAMG00000021760	si:dkey-85a20.4	86	44.979	Mastacembelus_armatus
ENSHGLG00000011592	TARBP1	87	45.563	ENSMZEG00005005751	si:dkey-85a20.4	85	45.493	Maylandia_zebra
ENSHGLG00000011592	TARBP1	100	75.579	ENSMAUG00000020968	Tarbp1	99	74.953	Mesocricetus_auratus
ENSHGLG00000011592	TARBP1	99	70.988	ENSMICG00000015280	TARBP1	99	70.581	Microcebus_murinus
ENSHGLG00000011592	TARBP1	100	74.937	ENSMOCG00000004128	Tarbp1	99	74.311	Microtus_ochrogaster
ENSHGLG00000011592	TARBP1	99	40.734	ENSMMOG00000007795	si:dkey-85a20.4	84	43.643	Mola_mola
ENSHGLG00000011592	TARBP1	99	67.170	ENSMODG00000008504	TARBP1	99	67.291	Monodelphis_domestica
ENSHGLG00000011592	TARBP1	86	45.154	ENSMALG00000002916	si:dkey-85a20.4	85	45.226	Monopterus_albus
ENSHGLG00000011592	TARBP1	99	74.483	MGP_CAROLIEiJ_G0031729	Tarbp1	99	73.793	Mus_caroli
ENSHGLG00000011592	TARBP1	99	74.232	ENSMUSG00000090290	Tarbp1	99	73.480	Mus_musculus
ENSHGLG00000011592	TARBP1	99	74.765	MGP_PahariEiJ_G0023326	Tarbp1	99	74.076	Mus_pahari
ENSHGLG00000011592	TARBP1	99	74.528	MGP_SPRETEiJ_G0032846	Tarbp1	99	73.774	Mus_spretus
ENSHGLG00000011592	TARBP1	78	78.180	ENSMPUG00000002802	TARBP1	99	77.760	Mustela_putorius_furo
ENSHGLG00000011592	TARBP1	85	71.720	ENSMLUG00000002414	TARBP1	99	71.939	Myotis_lucifugus
ENSHGLG00000011592	TARBP1	99	78.629	ENSNLEG00000002518	TARBP1	99	78.567	Nomascus_leucogenys
ENSHGLG00000011592	TARBP1	67	72.128	ENSMEUG00000011370	-	67	72.128	Notamacropus_eugenii
ENSHGLG00000011592	TARBP1	72	80.367	ENSOPRG00000013822	TARBP1	71	80.367	Ochotona_princeps
ENSHGLG00000011592	TARBP1	100	85.867	ENSODEG00000005238	TARBP1	100	85.678	Octodon_degus
ENSHGLG00000011592	TARBP1	85	45.267	ENSONIG00000009789	si:dkey-85a20.4	99	45.053	Oreochromis_niloticus
ENSHGLG00000011592	TARBP1	99	79.035	ENSOCUG00000017418	TARBP1	99	79.344	Oryctolagus_cuniculus
ENSHGLG00000011592	TARBP1	99	40.595	ENSORLG00000010529	si:dkey-85a20.4	85	43.586	Oryzias_latipes
ENSHGLG00000011592	TARBP1	99	40.580	ENSORLG00020019264	si:dkey-85a20.4	85	43.586	Oryzias_latipes_hni
ENSHGLG00000011592	TARBP1	99	40.459	ENSORLG00015003276	si:dkey-85a20.4	85	43.303	Oryzias_latipes_hsok
ENSHGLG00000011592	TARBP1	99	76.314	ENSOGAG00000002379	TARBP1	99	76.190	Otolemur_garnettii
ENSHGLG00000011592	TARBP1	99	76.578	ENSOARG00000003434	TARBP1	99	76.426	Ovis_aries
ENSHGLG00000011592	TARBP1	85	80.309	ENSPPAG00000028097	TARBP1	99	80.382	Pan_paniscus
ENSHGLG00000011592	TARBP1	95	79.630	ENSPPRG00000013561	TARBP1	99	69.562	Panthera_pardus
ENSHGLG00000011592	TARBP1	84	78.513	ENSPTIG00000009281	TARBP1	99	78.673	Panthera_tigris_altaica
ENSHGLG00000011592	TARBP1	99	78.532	ENSPTRG00000002124	TARBP1	99	78.470	Pan_troglodytes
ENSHGLG00000011592	TARBP1	99	78.196	ENSPANG00000021933	TARBP1	99	78.258	Papio_anubis
ENSHGLG00000011592	TARBP1	99	43.408	ENSPKIG00000016716	si:dkey-85a20.4	85	47.080	Paramormyrops_kingsleyae
ENSHGLG00000011592	TARBP1	80	67.444	ENSPSIG00000010699	TARBP1	99	67.263	Pelodiscus_sinensis
ENSHGLG00000011592	TARBP1	99	77.731	ENSPEMG00000006888	Tarbp1	99	77.660	Peromyscus_maniculatus_bairdii
ENSHGLG00000011592	TARBP1	91	81.373	ENSPCIG00000029710	TARBP1	99	81.373	Phascolarctos_cinereus
ENSHGLG00000011592	TARBP1	86	43.608	ENSPFOG00000013020	si:dkey-85a20.4	99	43.537	Poecilia_formosa
ENSHGLG00000011592	TARBP1	99	40.568	ENSPLAG00000006044	si:dkey-85a20.4	85	43.732	Poecilia_latipinna
ENSHGLG00000011592	TARBP1	99	40.426	ENSPMEG00000017857	si:dkey-85a20.4	85	43.590	Poecilia_mexicana
ENSHGLG00000011592	TARBP1	86	44.153	ENSPREG00000022753	si:dkey-85a20.4	85	43.935	Poecilia_reticulata
ENSHGLG00000011592	TARBP1	91	78.752	ENSPPYG00000000102	TARBP1	99	77.718	Pongo_abelii
ENSHGLG00000011592	TARBP1	85	86.667	ENSPCAG00000004808	TARBP1	85	86.667	Procavia_capensis
ENSHGLG00000011592	TARBP1	99	75.943	ENSPCOG00000005666	TARBP1	99	76.376	Propithecus_coquereli
ENSHGLG00000011592	TARBP1	99	65.274	ENSPVAG00000014798	TARBP1	99	65.586	Pteropus_vampyrus
ENSHGLG00000011592	TARBP1	87	44.076	ENSPNYG00000019135	si:dkey-85a20.4	85	44.076	Pundamilia_nyererei
ENSHGLG00000011592	TARBP1	99	70.658	ENSRNOG00000053574	Tarbp1	99	70.031	Rattus_norvegicus
ENSHGLG00000011592	TARBP1	99	73.093	ENSRBIG00000043362	TARBP1	99	73.005	Rhinopithecus_bieti
ENSHGLG00000011592	TARBP1	99	74.520	ENSRROG00000029527	TARBP1	99	74.892	Rhinopithecus_roxellana
ENSHGLG00000011592	TARBP1	88	79.275	ENSSBOG00000034503	TARBP1	99	79.275	Saimiri_boliviensis_boliviensis
ENSHGLG00000011592	TARBP1	84	71.683	ENSSHAG00000000013	TARBP1	99	71.609	Sarcophilus_harrisii
ENSHGLG00000011592	TARBP1	85	45.396	ENSSFOG00015002660	si:dkey-85a20.4	97	46.114	Scleropages_formosus
ENSHGLG00000011592	TARBP1	92	44.720	ENSSMAG00000007081	si:dkey-85a20.4	87	45.301	Scophthalmus_maximus
ENSHGLG00000011592	TARBP1	93	42.623	ENSSDUG00000023566	si:dkey-85a20.4	85	44.168	Seriola_dumerili
ENSHGLG00000011592	TARBP1	85	46.187	ENSSLDG00000020200	si:dkey-85a20.4	84	46.370	Seriola_lalandi_dorsalis
ENSHGLG00000011592	TARBP1	89	76.905	ENSSARG00000012207	TARBP1	89	76.905	Sorex_araneus
ENSHGLG00000011592	TARBP1	99	60.853	ENSSPUG00000015364	TARBP1	99	59.901	Sphenodon_punctatus
ENSHGLG00000011592	TARBP1	92	43.610	ENSSPAG00000007213	si:dkey-85a20.4	88	44.391	Stegastes_partitus
ENSHGLG00000011592	TARBP1	99	77.805	ENSSSCG00000010160	TARBP1	99	77.867	Sus_scrofa
ENSHGLG00000011592	TARBP1	82	65.520	ENSTGUG00000010214	TARBP1	100	65.520	Taeniopygia_guttata
ENSHGLG00000011592	TARBP1	94	39.728	ENSTNIG00000016586	si:dkey-85a20.4	99	44.733	Tetraodon_nigroviridis
ENSHGLG00000011592	TARBP1	92	75.841	ENSTTRG00000008707	TARBP1	95	75.841	Tursiops_truncatus
ENSHGLG00000011592	TARBP1	83	79.186	ENSUMAG00000006730	TARBP1	99	78.991	Ursus_maritimus
ENSHGLG00000011592	TARBP1	72	84.000	ENSVPAG00000007665	TARBP1	80	84.000	Vicugna_pacos
ENSHGLG00000011592	TARBP1	89	77.545	ENSVVUG00000007460	TARBP1	99	78.799	Vulpes_vulpes
ENSHGLG00000011592	TARBP1	85	53.561	ENSXETG00000016224	tarbp1	99	53.561	Xenopus_tropicalis
ENSHGLG00000011592	TARBP1	77	47.885	ENSXCOG00000011779	si:dkey-85a20.4	91	47.885	Xiphophorus_couchianus
ENSHGLG00000011592	TARBP1	66	42.130	ENSXMAG00000009600	si:dkey-85a20.4	100	41.935	Xiphophorus_maculatus