EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000011625 (Gene tree)
Gene ID: -
Gene Symbol: LSM10
Alias: MGC15749
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 3177 bases
Position: chrJH602077.1:19306932-19310108
Accession: 101721611
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000016228	LSM	PF01423.22	6.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000016397	-	941	XM_004850960	ENSHGLP00000016228	123 (aa)	XP_004851017	G5C6G2

Gene Model

Click here to download ENSHGLG00000011625's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000011625's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000011625	LSM10	55	31.429	ENSHGLG00000011299	LSM2	74	31.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000011625	LSM10	100	92.683	ENSG00000181817	LSM10	100	92.683	Homo_sapiens
ENSHGLG00000011625	LSM10	100	92.683	ENSAMEG00000019854	LSM10	100	92.683	Ailuropoda_melanoleuca
ENSHGLG00000011625	LSM10	94	66.379	ENSACIG00000015420	oscp1a	77	66.379	Amphilophus_citrinellus
ENSHGLG00000011625	LSM10	90	63.964	ENSAOCG00000015607	LSM10	86	63.964	Amphiprion_ocellaris
ENSHGLG00000011625	LSM10	96	66.949	ENSAOCG00000014654	-	98	66.949	Amphiprion_ocellaris
ENSHGLG00000011625	LSM10	96	66.949	ENSAOCG00000015618	LSM10	98	66.949	Amphiprion_ocellaris
ENSHGLG00000011625	LSM10	90	63.964	ENSAPEG00000021851	LSM10	86	63.964	Amphiprion_percula
ENSHGLG00000011625	LSM10	96	66.949	ENSAPEG00000021845	-	98	66.949	Amphiprion_percula
ENSHGLG00000011625	LSM10	94	62.069	ENSATEG00000006310	oscp1a	86	62.069	Anabas_testudineus
ENSHGLG00000011625	LSM10	100	66.667	ENSACAG00000001231	LSM10	100	66.667	Anolis_carolinensis
ENSHGLG00000011625	LSM10	98	91.667	ENSANAG00000031489	-	98	91.667	Aotus_nancymaae
ENSHGLG00000011625	LSM10	100	91.870	ENSANAG00000018759	-	100	91.870	Aotus_nancymaae
ENSHGLG00000011625	LSM10	96	66.949	ENSACLG00000004728	oscp1a	96	66.949	Astatotilapia_calliptera
ENSHGLG00000011625	LSM10	96	67.797	ENSAMXG00000025301	oscp1a	98	67.797	Astyanax_mexicanus
ENSHGLG00000011625	LSM10	98	92.500	ENSBTAG00000024096	LSM10	98	92.500	Bos_taurus
ENSHGLG00000011625	LSM10	100	91.057	ENSCJAG00000044880	LSM10	100	91.057	Callithrix_jacchus
ENSHGLG00000011625	LSM10	100	93.496	ENSCAFG00000003382	LSM10	100	93.496	Canis_familiaris
ENSHGLG00000011625	LSM10	100	93.496	ENSCAFG00020008920	LSM10	100	93.496	Canis_lupus_dingo
ENSHGLG00000011625	LSM10	98	92.500	ENSCHIG00000009398	LSM10	98	92.500	Capra_hircus
ENSHGLG00000011625	LSM10	100	96.748	ENSCAPG00000012567	LSM10	100	96.748	Cavia_aperea
ENSHGLG00000011625	LSM10	100	96.748	ENSCPOG00000039302	LSM10	100	96.748	Cavia_porcellus
ENSHGLG00000011625	LSM10	98	91.667	ENSCCAG00000008378	-	98	91.667	Cebus_capucinus
ENSHGLG00000011625	LSM10	100	91.870	ENSCCAG00000018913	-	100	91.870	Cebus_capucinus
ENSHGLG00000011625	LSM10	100	92.683	ENSCATG00000006589	LSM10	100	92.683	Cercocebus_atys
ENSHGLG00000011625	LSM10	100	97.561	ENSCLAG00000008633	LSM10	100	97.561	Chinchilla_lanigera
ENSHGLG00000011625	LSM10	100	92.683	ENSCSAG00000000134	LSM10	100	92.683	Chlorocebus_sabaeus
ENSHGLG00000011625	LSM10	100	92.000	ENSCHOG00000008615	LSM10	100	92.000	Choloepus_hoffmanni
ENSHGLG00000011625	LSM10	78	30.208	ENSCING00000024984	-	83	30.208	Ciona_intestinalis
ENSHGLG00000011625	LSM10	83	31.373	ENSCSAVG00000001896	-	87	31.373	Ciona_savignyi
ENSHGLG00000011625	LSM10	100	92.683	ENSCANG00000019928	LSM10	100	92.683	Colobus_angolensis_palliatus
ENSHGLG00000011625	LSM10	98	90.083	ENSCGRG00001004317	-	99	90.083	Cricetulus_griseus_chok1gshd
ENSHGLG00000011625	LSM10	93	80.342	ENSCGRG00001022673	-	94	80.342	Cricetulus_griseus_chok1gshd
ENSHGLG00000011625	LSM10	93	80.342	ENSCGRG00000015514	-	94	80.342	Cricetulus_griseus_crigri
ENSHGLG00000011625	LSM10	98	90.083	ENSCGRG00000014935	-	99	90.083	Cricetulus_griseus_crigri
ENSHGLG00000011625	LSM10	96	63.559	ENSCSEG00000010374	oscp1a	79	63.559	Cynoglossus_semilaevis
ENSHGLG00000011625	LSM10	97	62.185	ENSCVAG00000001536	oscp1a	90	62.185	Cyprinodon_variegatus
ENSHGLG00000011625	LSM10	98	71.074	ENSDARG00000101222	oscp1a	100	71.074	Danio_rerio
ENSHGLG00000011625	LSM10	69	70.588	ENSDARG00000109563	CABZ01074453.1	99	70.588	Danio_rerio
ENSHGLG00000011625	LSM10	99	92.623	ENSDNOG00000036662	LSM10	99	92.623	Dasypus_novemcinctus
ENSHGLG00000011625	LSM10	100	91.057	ENSDORG00000007579	Lsm10	100	91.057	Dipodomys_ordii
ENSHGLG00000011625	LSM10	100	89.431	ENSETEG00000005703	LSM10	100	89.431	Echinops_telfairi
ENSHGLG00000011625	LSM10	95	51.282	ENSEBUG00000001312	oscp1a	96	51.282	Eptatretus_burgeri
ENSHGLG00000011625	LSM10	100	91.870	ENSEASG00005012194	LSM10	100	91.870	Equus_asinus_asinus
ENSHGLG00000011625	LSM10	100	92.683	ENSECAG00000005071	LSM10	100	92.683	Equus_caballus
ENSHGLG00000011625	LSM10	100	90.244	ENSEEUG00000012032	LSM10	100	90.244	Erinaceus_europaeus
ENSHGLG00000011625	LSM10	98	68.595	ENSELUG00000007452	oscp1a	99	68.595	Esox_lucius
ENSHGLG00000011625	LSM10	100	68.293	ENSFALG00000000851	LSM10	100	68.293	Ficedula_albicollis
ENSHGLG00000011625	LSM10	100	93.496	ENSFDAG00000021056	LSM10	100	93.496	Fukomys_damarensis
ENSHGLG00000011625	LSM10	89	67.273	ENSFHEG00000001058	oscp1a	95	67.273	Fundulus_heteroclitus
ENSHGLG00000011625	LSM10	97	61.667	ENSGMOG00000019832	oscp1a	98	61.667	Gadus_morhua
ENSHGLG00000011625	LSM10	100	71.545	ENSGALG00000002127	LSM10	100	71.545	Gallus_gallus
ENSHGLG00000011625	LSM10	91	58.261	ENSGAFG00000016445	oscp1a	93	58.261	Gambusia_affinis
ENSHGLG00000011625	LSM10	96	63.559	ENSGACG00000002329	oscp1a	97	63.559	Gasterosteus_aculeatus
ENSHGLG00000011625	LSM10	100	71.545	ENSGAGG00000024848	LSM10	100	71.545	Gopherus_agassizii
ENSHGLG00000011625	LSM10	100	91.870	ENSGGOG00000003556	LSM10	100	91.870	Gorilla_gorilla
ENSHGLG00000011625	LSM10	96	66.949	ENSHBUG00000001722	oscp1a	96	66.949	Haplochromis_burtoni
ENSHGLG00000011625	LSM10	100	100.000	ENSHGLG00100001769	LSM10	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000011625	LSM10	86	65.094	ENSIPUG00000005808	oscp1a	92	65.094	Ictalurus_punctatus
ENSHGLG00000011625	LSM10	100	93.496	ENSSTOG00000000606	LSM10	100	93.496	Ictidomys_tridecemlineatus
ENSHGLG00000011625	LSM10	96	64.407	ENSKMAG00000012143	oscp1a	98	64.407	Kryptolebias_marmoratus
ENSHGLG00000011625	LSM10	98	64.167	ENSLBEG00000017764	oscp1a	98	64.167	Labrus_bergylta
ENSHGLG00000011625	LSM10	100	71.545	ENSLACG00000015904	LSM10	95	71.545	Latimeria_chalumnae
ENSHGLG00000011625	LSM10	98	68.333	ENSLOCG00000018277	oscp1a	98	68.333	Lepisosteus_oculatus
ENSHGLG00000011625	LSM10	100	91.870	ENSLAFG00000009600	LSM10	100	91.870	Loxodonta_africana
ENSHGLG00000011625	LSM10	100	92.683	ENSMFAG00000009115	LSM10	100	92.683	Macaca_fascicularis
ENSHGLG00000011625	LSM10	100	92.683	ENSMMUG00000017338	LSM10	100	92.683	Macaca_mulatta
ENSHGLG00000011625	LSM10	100	92.683	ENSMNEG00000020023	LSM10	100	92.683	Macaca_nemestrina
ENSHGLG00000011625	LSM10	100	92.683	ENSMLEG00000025150	LSM10	100	92.683	Mandrillus_leucophaeus
ENSHGLG00000011625	LSM10	98	64.167	ENSMAMG00000004427	oscp1a	98	64.167	Mastacembelus_armatus
ENSHGLG00000011625	LSM10	96	66.949	ENSMZEG00005026307	oscp1a	96	66.949	Maylandia_zebra
ENSHGLG00000011625	LSM10	100	70.732	ENSMGAG00000015707	LSM10	100	70.732	Meleagris_gallopavo
ENSHGLG00000011625	LSM10	98	87.603	ENSMAUG00000016624	Lsm10	99	87.603	Mesocricetus_auratus
ENSHGLG00000011625	LSM10	98	88.430	ENSMOCG00000021943	Lsm10	99	88.430	Microtus_ochrogaster
ENSHGLG00000011625	LSM10	95	64.103	ENSMMOG00000013597	oscp1a	87	64.103	Mola_mola
ENSHGLG00000011625	LSM10	100	82.927	ENSMODG00000023328	LSM10	100	82.927	Monodelphis_domestica
ENSHGLG00000011625	LSM10	58	56.579	ENSMALG00000012661	oscp1a	60	56.579	Monopterus_albus
ENSHGLG00000011625	LSM10	98	88.430	MGP_CAROLIEiJ_G0026467	Lsm10	100	89.247	Mus_caroli
ENSHGLG00000011625	LSM10	98	89.256	ENSMUSG00000050188	Lsm10	100	90.323	Mus_musculus
ENSHGLG00000011625	LSM10	98	89.256	MGP_PahariEiJ_G0028798	Lsm10	100	90.323	Mus_pahari
ENSHGLG00000011625	LSM10	98	89.256	MGP_SPRETEiJ_G0027446	Lsm10	100	90.323	Mus_spretus
ENSHGLG00000011625	LSM10	100	93.496	ENSMPUG00000018593	LSM10	100	93.496	Mustela_putorius_furo
ENSHGLG00000011625	LSM10	100	88.618	ENSMLUG00000023895	LSM10	100	88.618	Myotis_lucifugus
ENSHGLG00000011625	LSM10	100	91.057	ENSNGAG00000015011	Lsm10	100	91.057	Nannospalax_galili
ENSHGLG00000011625	LSM10	96	67.797	ENSNBRG00000014306	oscp1a	96	67.797	Neolamprologus_brichardi
ENSHGLG00000011625	LSM10	100	91.870	ENSNLEG00000033754	LSM10	100	91.870	Nomascus_leucogenys
ENSHGLG00000011625	LSM10	100	83.740	ENSMEUG00000006313	LSM10	100	83.740	Notamacropus_eugenii
ENSHGLG00000011625	LSM10	100	90.244	ENSOPRG00000001699	LSM10	100	90.244	Ochotona_princeps
ENSHGLG00000011625	LSM10	100	97.561	ENSODEG00000019161	LSM10	100	97.561	Octodon_degus
ENSHGLG00000011625	LSM10	96	67.797	ENSONIG00000020904	oscp1a	97	67.797	Oreochromis_niloticus
ENSHGLG00000011625	LSM10	100	76.423	ENSOANG00000002066	LSM10	100	76.423	Ornithorhynchus_anatinus
ENSHGLG00000011625	LSM10	100	89.431	ENSOCUG00000005333	LSM10	100	89.431	Oryctolagus_cuniculus
ENSHGLG00000011625	LSM10	97	64.706	ENSORLG00000009504	oscp1a	98	64.706	Oryzias_latipes
ENSHGLG00000011625	LSM10	97	64.706	ENSORLG00020016201	oscp1a	98	64.706	Oryzias_latipes_hni
ENSHGLG00000011625	LSM10	97	65.546	ENSORLG00015007794	oscp1a	98	65.546	Oryzias_latipes_hsok
ENSHGLG00000011625	LSM10	100	91.870	ENSOGAG00000002653	LSM10	100	91.870	Otolemur_garnettii
ENSHGLG00000011625	LSM10	98	92.500	ENSOARG00000009596	LSM10	98	92.500	Ovis_aries
ENSHGLG00000011625	LSM10	100	92.683	ENSPPAG00000023465	LSM10	100	92.683	Pan_paniscus
ENSHGLG00000011625	LSM10	100	92.683	ENSPPRG00000014619	LSM10	100	92.683	Panthera_pardus
ENSHGLG00000011625	LSM10	100	92.683	ENSPTIG00000004613	LSM10	100	92.683	Panthera_tigris_altaica
ENSHGLG00000011625	LSM10	100	92.683	ENSPTRG00000000539	LSM10	100	92.683	Pan_troglodytes
ENSHGLG00000011625	LSM10	100	92.683	ENSPANG00000023172	LSM10	100	92.683	Papio_anubis
ENSHGLG00000011625	LSM10	98	66.667	ENSPKIG00000003728	oscp1a	97	66.667	Paramormyrops_kingsleyae
ENSHGLG00000011625	LSM10	100	71.545	ENSPSIG00000000590	LSM10	100	71.545	Pelodiscus_sinensis
ENSHGLG00000011625	LSM10	62	63.158	ENSPMGG00000015718	oscp1a	99	63.158	Periophthalmus_magnuspinnatus
ENSHGLG00000011625	LSM10	84	83.495	ENSPCIG00000014865	LSM10	76	83.495	Phascolarctos_cinereus
ENSHGLG00000011625	LSM10	91	65.179	ENSPFOG00000020490	oscp1a	95	65.179	Poecilia_formosa
ENSHGLG00000011625	LSM10	91	65.179	ENSPLAG00000016537	oscp1a	85	65.179	Poecilia_latipinna
ENSHGLG00000011625	LSM10	88	65.741	ENSPMEG00000000174	oscp1a	94	65.741	Poecilia_mexicana
ENSHGLG00000011625	LSM10	91	64.286	ENSPREG00000009899	oscp1a	85	64.286	Poecilia_reticulata
ENSHGLG00000011625	LSM10	100	92.683	ENSPPYG00000001539	LSM10	100	92.683	Pongo_abelii
ENSHGLG00000011625	LSM10	96	92.373	ENSPCAG00000002520	LSM10	97	92.373	Procavia_capensis
ENSHGLG00000011625	LSM10	100	93.496	ENSPVAG00000008644	LSM10	100	93.496	Pteropus_vampyrus
ENSHGLG00000011625	LSM10	96	66.949	ENSPNYG00000003138	oscp1a	96	66.949	Pundamilia_nyererei
ENSHGLG00000011625	LSM10	95	65.812	ENSPNAG00000028829	oscp1a	97	65.812	Pygocentrus_nattereri
ENSHGLG00000011625	LSM10	98	90.083	ENSRNOG00000025716	Lsm10	99	90.083	Rattus_norvegicus
ENSHGLG00000011625	LSM10	100	92.683	ENSRBIG00000001561	LSM10	100	92.683	Rhinopithecus_bieti
ENSHGLG00000011625	LSM10	100	92.683	ENSRROG00000011414	LSM10	100	92.683	Rhinopithecus_roxellana
ENSHGLG00000011625	LSM10	100	91.870	ENSSBOG00000036413	-	100	91.870	Saimiri_boliviensis_boliviensis
ENSHGLG00000011625	LSM10	100	82.927	ENSSHAG00000018056	LSM10	100	82.927	Sarcophilus_harrisii
ENSHGLG00000011625	LSM10	98	64.463	ENSSFOG00015019954	lsm10	99	64.463	Scleropages_formosus
ENSHGLG00000011625	LSM10	93	65.217	ENSSMAG00000001297	oscp1a	98	65.217	Scophthalmus_maximus
ENSHGLG00000011625	LSM10	98	63.636	ENSSDUG00000007090	oscp1a	98	63.636	Seriola_dumerili
ENSHGLG00000011625	LSM10	94	64.655	ENSSLDG00000000800	oscp1a	96	64.655	Seriola_lalandi_dorsalis
ENSHGLG00000011625	LSM10	100	90.400	ENSSARG00000004211	LSM10	100	92.000	Sorex_araneus
ENSHGLG00000011625	LSM10	94	64.655	ENSSPAG00000009229	oscp1a	96	64.655	Stegastes_partitus
ENSHGLG00000011625	LSM10	100	87.805	ENSSSCG00000038916	LSM10	100	87.805	Sus_scrofa
ENSHGLG00000011625	LSM10	99	68.852	ENSTGUG00000001600	-	100	68.852	Taeniopygia_guttata
ENSHGLG00000011625	LSM10	99	68.852	ENSTGUG00000001602	-	100	68.852	Taeniopygia_guttata
ENSHGLG00000011625	LSM10	97	64.706	ENSTRUG00000010531	oscp1a	96	64.706	Takifugu_rubripes
ENSHGLG00000011625	LSM10	100	90.244	ENSTBEG00000016674	LSM10	100	90.244	Tupaia_belangeri
ENSHGLG00000011625	LSM10	100	91.870	ENSUAMG00000020265	LSM10	100	91.870	Ursus_americanus
ENSHGLG00000011625	LSM10	100	91.870	ENSUMAG00000001438	LSM10	57	91.870	Ursus_maritimus
ENSHGLG00000011625	LSM10	100	93.496	ENSVVUG00000023209	LSM10	100	93.496	Vulpes_vulpes
ENSHGLG00000011625	LSM10	100	69.106	ENSXETG00000027631	lsm10	100	69.106	Xenopus_tropicalis
ENSHGLG00000011625	LSM10	96	61.017	ENSXCOG00000018776	oscp1a	74	61.017	Xiphophorus_couchianus
ENSHGLG00000011625	LSM10	88	63.889	ENSXMAG00000019963	oscp1a	86	63.889	Xiphophorus_maculatus