EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000011722 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 3512 bases
Position: chrJH602044.1:4463980-4467491
Accession: 101698887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000016357	PseudoU_synth_2	PF00849.22	4.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000016526	RPUSD3-201	1170	XM_004835298	ENSHGLP00000016357	389 (aa)	XP_004835355	G5BX85

Gene Model

Click here to download ENSHGLG00000011722's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000011722's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000011722	RPUSD3	70	31.488	ENSHGLG00000002285	RPUSD4	71	31.142

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000011722	RPUSD3	96	67.112	ENSG00000156990	RPUSD3	98	71.564	Homo_sapiens
ENSHGLG00000011722	RPUSD3	74	75.932	ENSAMEG00000016227	RPUSD3	84	75.932	Ailuropoda_melanoleuca
ENSHGLG00000011722	RPUSD3	84	51.051	ENSACAG00000009836	RPUSD3	93	51.051	Anolis_carolinensis
ENSHGLG00000011722	RPUSD3	52	54.673	ENSANAG00000007127	-	99	47.867	Aotus_nancymaae
ENSHGLG00000011722	RPUSD3	74	78.425	ENSBTAG00000007968	RPUSD3	85	78.425	Bos_taurus
ENSHGLG00000011722	RPUSD3	74	75.932	ENSCAFG00000029733	RPUSD3	84	75.932	Canis_familiaris
ENSHGLG00000011722	RPUSD3	74	75.932	ENSCAFG00020008582	RPUSD3	90	75.932	Canis_lupus_dingo
ENSHGLG00000011722	RPUSD3	71	80.866	ENSCHIG00000026027	RPUSD3	83	80.866	Capra_hircus
ENSHGLG00000011722	RPUSD3	74	74.074	ENSTSYG00000009994	RPUSD3	85	74.074	Carlito_syrichta
ENSHGLG00000011722	RPUSD3	68	90.114	ENSCAPG00000017559	RPUSD3	99	90.114	Cavia_aperea
ENSHGLG00000011722	RPUSD3	68	89.773	ENSCPOG00000037956	RPUSD3	86	83.882	Cavia_porcellus
ENSHGLG00000011722	RPUSD3	74	79.381	ENSCCAG00000029530	RPUSD3	87	78.261	Cebus_capucinus
ENSHGLG00000011722	RPUSD3	96	68.717	ENSCATG00000036939	RPUSD3	87	79.348	Cercocebus_atys
ENSHGLG00000011722	RPUSD3	96	68.449	ENSCSAG00000010506	RPUSD3	93	68.449	Chlorocebus_sabaeus
ENSHGLG00000011722	RPUSD3	54	54.762	ENSCPBG00000008825	RPUSD3	95	51.751	Chrysemys_picta_bellii
ENSHGLG00000011722	RPUSD3	97	68.966	ENSCANG00000040711	RPUSD3	87	79.891	Colobus_angolensis_palliatus
ENSHGLG00000011722	RPUSD3	83	67.262	ENSCGRG00001004923	Rpusd3	94	60.204	Cricetulus_griseus_chok1gshd
ENSHGLG00000011722	RPUSD3	83	67.262	ENSCGRG00000018315	Rpusd3	99	60.204	Cricetulus_griseus_crigri
ENSHGLG00000011722	RPUSD3	72	74.910	ENSDNOG00000039160	RPUSD3	74	74.910	Dasypus_novemcinctus
ENSHGLG00000011722	RPUSD3	68	74.182	ENSDORG00000026827	Rpusd3	94	74.182	Dipodomys_ordii
ENSHGLG00000011722	RPUSD3	71	74.909	ENSETEG00000006538	RPUSD3	78	74.909	Echinops_telfairi
ENSHGLG00000011722	RPUSD3	51	39.604	ENSEBUG00000015605	RPUSD3	65	39.604	Eptatretus_burgeri
ENSHGLG00000011722	RPUSD3	72	79.286	ENSEASG00005014160	RPUSD3	78	79.286	Equus_asinus_asinus
ENSHGLG00000011722	RPUSD3	100	63.753	ENSECAG00000019988	RPUSD3	96	63.753	Equus_caballus
ENSHGLG00000011722	RPUSD3	54	74.057	ENSEEUG00000007353	RPUSD3	60	74.057	Erinaceus_europaeus
ENSHGLG00000011722	RPUSD3	74	77.288	ENSFCAG00000014199	RPUSD3	84	77.288	Felis_catus
ENSHGLG00000011722	RPUSD3	70	48.897	ENSFALG00000012968	RPUSD3	99	48.897	Ficedula_albicollis
ENSHGLG00000011722	RPUSD3	68	92.424	ENSFDAG00000008350	RPUSD3	85	89.531	Fukomys_damarensis
ENSHGLG00000011722	RPUSD3	67	52.290	ENSGAGG00000007493	RPUSD3	82	52.672	Gopherus_agassizii
ENSHGLG00000011722	RPUSD3	96	66.845	ENSGGOG00000013120	RPUSD3	87	78.804	Gorilla_gorilla
ENSHGLG00000011722	RPUSD3	100	100.000	ENSHGLG00100016038	RPUSD3	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000011722	RPUSD3	99	62.887	ENSSTOG00000002125	RPUSD3	97	62.887	Ictidomys_tridecemlineatus
ENSHGLG00000011722	RPUSD3	100	58.869	ENSJJAG00000012679	Rpusd3	100	58.869	Jaculus_jaculus
ENSHGLG00000011722	RPUSD3	72	77.500	ENSLAFG00000017501	RPUSD3	81	77.500	Loxodonta_africana
ENSHGLG00000011722	RPUSD3	96	68.449	ENSMFAG00000032407	RPUSD3	93	68.449	Macaca_fascicularis
ENSHGLG00000011722	RPUSD3	96	64.439	ENSMMUG00000010628	RPUSD3	91	81.100	Macaca_mulatta
ENSHGLG00000011722	RPUSD3	98	67.454	ENSMNEG00000040308	RPUSD3	95	67.454	Macaca_nemestrina
ENSHGLG00000011722	RPUSD3	96	68.449	ENSMLEG00000033940	RPUSD3	87	79.348	Mandrillus_leucophaeus
ENSHGLG00000011722	RPUSD3	100	59.640	ENSMAUG00000015473	Rpusd3	100	59.640	Mesocricetus_auratus
ENSHGLG00000011722	RPUSD3	72	79.643	ENSMICG00000002315	RPUSD3	81	79.643	Microcebus_murinus
ENSHGLG00000011722	RPUSD3	100	58.612	ENSMOCG00000022613	Rpusd3	100	58.612	Microtus_ochrogaster
ENSHGLG00000011722	RPUSD3	71	60.432	ENSMODG00000005210	RPUSD3	73	60.432	Monodelphis_domestica
ENSHGLG00000011722	RPUSD3	100	59.383	MGP_CAROLIEiJ_G0028725	Rpusd3	100	59.383	Mus_caroli
ENSHGLG00000011722	RPUSD3	100	60.668	ENSMUSG00000051169	Rpusd3	100	61.183	Mus_musculus
ENSHGLG00000011722	RPUSD3	72	74.021	MGP_PahariEiJ_G0022476	Rpusd3	81	76.037	Mus_pahari
ENSHGLG00000011722	RPUSD3	100	59.897	MGP_SPRETEiJ_G0029753	Rpusd3	100	60.411	Mus_spretus
ENSHGLG00000011722	RPUSD3	72	79.286	ENSMPUG00000017132	RPUSD3	80	79.286	Mustela_putorius_furo
ENSHGLG00000011722	RPUSD3	72	81.786	ENSMLUG00000006135	RPUSD3	80	81.786	Myotis_lucifugus
ENSHGLG00000011722	RPUSD3	73	73.958	ENSNGAG00000023704	Rpusd3	86	73.958	Nannospalax_galili
ENSHGLG00000011722	RPUSD3	98	54.922	ENSNLEG00000004214	RPUSD3	87	79.348	Nomascus_leucogenys
ENSHGLG00000011722	RPUSD3	67	65.134	ENSMEUG00000013098	-	100	65.134	Notamacropus_eugenii
ENSHGLG00000011722	RPUSD3	74	61.017	ENSOPRG00000002300	RPUSD3	89	58.466	Ochotona_princeps
ENSHGLG00000011722	RPUSD3	68	87.879	ENSODEG00000018137	RPUSD3	91	87.879	Octodon_degus
ENSHGLG00000011722	RPUSD3	71	49.819	ENSOANG00000012081	-	96	49.819	Ornithorhynchus_anatinus
ENSHGLG00000011722	RPUSD3	97	55.497	ENSOCUG00000027885	RPUSD3	96	55.497	Oryctolagus_cuniculus
ENSHGLG00000011722	RPUSD3	72	79.286	ENSOGAG00000012592	RPUSD3	89	79.286	Otolemur_garnettii
ENSHGLG00000011722	RPUSD3	96	65.867	ENSOARG00000005928	RPUSD3	93	65.867	Ovis_aries
ENSHGLG00000011722	RPUSD3	96	66.400	ENSPPAG00000038083	RPUSD3	87	78.804	Pan_paniscus
ENSHGLG00000011722	RPUSD3	80	73.354	ENSPPRG00000024433	RPUSD3	90	68.966	Panthera_pardus
ENSHGLG00000011722	RPUSD3	80	74.295	ENSPTIG00000006828	RPUSD3	93	74.295	Panthera_tigris_altaica
ENSHGLG00000011722	RPUSD3	96	66.667	ENSPTRG00000051760	RPUSD3	87	78.804	Pan_troglodytes
ENSHGLG00000011722	RPUSD3	96	68.717	ENSPANG00000023885	RPUSD3	87	79.348	Papio_anubis
ENSHGLG00000011722	RPUSD3	80	68.051	ENSPEMG00000017245	Rpusd3	90	68.831	Peromyscus_maniculatus_bairdii
ENSHGLG00000011722	RPUSD3	71	63.669	ENSPCIG00000021901	RPUSD3	81	63.669	Phascolarctos_cinereus
ENSHGLG00000011722	RPUSD3	97	66.667	ENSPPYG00000013676	RPUSD3	95	66.667	Pongo_abelii
ENSHGLG00000011722	RPUSD3	72	80.714	ENSPCOG00000018314	RPUSD3	80	80.714	Propithecus_coquereli
ENSHGLG00000011722	RPUSD3	74	76.949	ENSPVAG00000011107	RPUSD3	84	76.949	Pteropus_vampyrus
ENSHGLG00000011722	RPUSD3	72	69.395	ENSRNOG00000009084	Rpusd3	83	69.395	Rattus_norvegicus
ENSHGLG00000011722	RPUSD3	97	68.966	ENSRBIG00000041230	RPUSD3	87	79.891	Rhinopithecus_bieti
ENSHGLG00000011722	RPUSD3	96	69.251	ENSRROG00000043328	RPUSD3	87	79.891	Rhinopithecus_roxellana
ENSHGLG00000011722	RPUSD3	96	65.416	ENSSBOG00000036106	RPUSD3	94	65.416	Saimiri_boliviensis_boliviensis
ENSHGLG00000011722	RPUSD3	71	62.816	ENSSHAG00000015536	RPUSD3	89	62.816	Sarcophilus_harrisii
ENSHGLG00000011722	RPUSD3	99	63.472	ENSSSCG00000011555	RPUSD3	97	63.472	Sus_scrofa
ENSHGLG00000011722	RPUSD3	56	50.230	ENSTGUG00000008744	RPUSD3	93	50.230	Taeniopygia_guttata
ENSHGLG00000011722	RPUSD3	84	59.816	ENSTBEG00000000176	RPUSD3	97	60.123	Tupaia_belangeri
ENSHGLG00000011722	RPUSD3	77	75.083	ENSTTRG00000007544	RPUSD3	86	75.083	Tursiops_truncatus
ENSHGLG00000011722	RPUSD3	74	76.271	ENSUAMG00000011354	RPUSD3	92	76.271	Ursus_americanus
ENSHGLG00000011722	RPUSD3	74	76.271	ENSUMAG00000018830	RPUSD3	84	76.271	Ursus_maritimus
ENSHGLG00000011722	RPUSD3	74	75.932	ENSVVUG00000023735	RPUSD3	86	75.932	Vulpes_vulpes
ENSHGLG00000011722	RPUSD3	71	46.429	ENSXETG00000023546	rpusd3	99	46.429	Xenopus_tropicalis